RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

BASIC

Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 RPAINQ86UA6 219 aa13.01□□□□□ -0.33
SNORD3C-201ENST00000580533 SERINC5Q86VE9 423 aa13.01□□□□□ -0.33
SNORD3C-201ENST00000580533 SMARCE1Q969G3 411 aa13.01□□□□□ -0.33
SNORD3C-201ENST00000580533 SCLT1Q96NL6 688 aa13.01□□□□□ -0.33
SNORD3C-201ENST00000580533 GSDMAQ96QA5 445 aa13.01□□□□□ -0.33
SNORD3C-201ENST00000580533 RUSC1Q9BVN2 902 aa13.01□□□□□ -0.33
SNORD3C-201ENST00000580533 POLR3FQ9H1D9 316 aaPredicted RBP13.01□□□□□ -0.33
SNORD3C-201ENST00000580533 C2orf40Q9H1Z8 148 aa13.01□□□□□ -0.33
SNORD3C-201ENST00000580533 ZHX3Q9H4I2 956 aa13.01□□□□□ -0.33
SNORD3C-201ENST00000580533 EXOC1Q9NV70 894 aa13.01□□□□□ -0.33
SNORD3C-201ENST00000580533 SUCLA2Q9P2R7 463 aaPredicted RBP13.01□□□□□ -0.33
SNORD3C-201ENST00000580533 WDR81Q562E7 1941 aa13.01□□□□□ -0.33
SNORD3C-201ENST00000580533 GRIN2DO15399 1336 aa13□□□□□ -0.33
SNORD3C-201ENST00000580533 TMEM150BA6NC51 233 aa13□□□□□ -0.33
SNORD3C-201ENST00000580533 MYMKA6NI61 221 aa13□□□□□ -0.33
SNORD3C-201ENST00000580533 TREHO43280 583 aa13□□□□□ -0.33
SNORD3C-201ENST00000580533 PQBP1O60828 265 aaKnown RBP13□□□□□ -0.33
SNORD3C-201ENST00000580533 HIP1RO75146 1068 aa13□□□□□ -0.33
SNORD3C-201ENST00000580533 PARNO95453 639 aaKnown RBP13□□□□□ -0.33
SNORD3C-201ENST00000580533 PLS3P13797 630 aa13□□□□□ -0.33
SNORD3C-201ENST00000580533 EN2P19622 333 aaPredicted RBP13□□□□□ -0.33
SNORD3C-201ENST00000580533 MNX1P50219 401 aaPredicted RBP13□□□□□ -0.33
SNORD3C-201ENST00000580533 ATN1P54259 1190 aaPredicted RBP13□□□□□ -0.33
SNORD3C-201ENST00000580533 ADAM17P78536 824 aa13□□□□□ -0.33
SNORD3C-201ENST00000580533 PSMD2Q13200 908 aa13□□□□□ -0.33
SNORD3C-201ENST00000580533 ALCAMQ13740 583 aa13□□□□□ -0.33
SNORD3C-201ENST00000580533 PCBP1Q15365 356 aaKnown RBP eCLIP13□□□□□ -0.33
SNORD3C-201ENST00000580533 ODR4Q5SWX8 454 aa13□□□□□ -0.33
SNORD3C-201ENST00000580533 MARCH8Q5T0T0 291 aa13□□□□□ -0.33
SNORD3C-201ENST00000580533 GDF6Q6KF10 455 aaPredicted RBP13□□□□□ -0.33
SNORD3C-201ENST00000580533 UNC13DQ70J99 1090 aa13□□□□□ -0.33
SNORD3C-201ENST00000580533 DYMQ7RTS9 669 aa13□□□□□ -0.33
SNORD3C-201ENST00000580533 SH3RF1Q7Z6J0 888 aa13□□□□□ -0.33
SNORD3C-201ENST00000580533 ZNF410Q86VK4 478 aa13□□□□□ -0.33
SNORD3C-201ENST00000580533 ZBTB8OSQ8IWT0 167 aa13□□□□□ -0.33
SNORD3C-201ENST00000580533 MYCT1Q8N699 235 aa13□□□□□ -0.33
SNORD3C-201ENST00000580533 GPT2Q8TD30 523 aa13□□□□□ -0.33
SNORD3C-201ENST00000580533 DIS3LQ8TF46 1054 aaKnown RBP13□□□□□ -0.33
SNORD3C-201ENST00000580533 TRAPPC12Q8WVT3 735 aa13□□□□□ -0.33
SNORD3C-201ENST00000580533 CEP89Q96ST8 783 aa13□□□□□ -0.33
SNORD3C-201ENST00000580533 SH2D3AQ9BRG2 576 aa13□□□□□ -0.33
SNORD3C-201ENST00000580533 REEP2Q9BRK0 252 aa13□□□□□ -0.33
SNORD3C-201ENST00000580533 INO80BQ9C086 356 aaPredicted RBP13□□□□□ -0.33
SNORD3C-201ENST00000580533 PDLIM7Q9NR12 457 aa13□□□□□ -0.33
SNORD3C-201ENST00000580533 PRKAG2Q9UGJ0 569 aa13□□□□□ -0.33
SNORD3C-201ENST00000580533 KAT6AQ92794 2004 aa13□□□□□ -0.33
SNORD3C-201ENST00000580533 A0A087WWV3 80 aa12.99□□□□□ -0.33
SNORD3C-201ENST00000580533 GOLGA6L3A6NEY3 463 aa12.99□□□□□ -0.33
SNORD3C-201ENST00000580533 MAPTP10636 758 aaKnown RBP12.99□□□□□ -0.33
SNORD3C-201ENST00000580533 PPP1R2P41236 205 aa12.99□□□□□ -0.33
SNORD3C-201ENST00000580533 NAMPTP43490 491 aa12.99□□□□□ -0.33
SNORD3C-201ENST00000580533 PHKA2P46019 1235 aa12.99□□□□□ -0.33
SNORD3C-201ENST00000580533 EFNA5P52803 228 aa12.99□□□□□ -0.33
SNORD3C-201ENST00000580533 POU5F1BQ06416 359 aa12.99□□□□□ -0.33
SNORD3C-201ENST00000580533 NCBP1Q09161 790 aaKnown RBP12.99□□□□□ -0.33
SNORD3C-201ENST00000580533 GIT2Q14161 759 aa12.99□□□□□ -0.33
SNORD3C-201ENST00000580533 HERC4Q5GLZ8 1057 aaPredicted RBP12.99□□□□□ -0.33
SNORD3C-201ENST00000580533 MAEAQ7L5Y9 396 aa12.99□□□□□ -0.33
SNORD3C-201ENST00000580533 RHPN2Q8IUC4 686 aa12.99□□□□□ -0.33
SNORD3C-201ENST00000580533 FAM126BQ8IXS8 530 aa12.99□□□□□ -0.33
SNORD3C-201ENST00000580533 TRIML1Q8N9V2 468 aa12.99□□□□□ -0.33
SNORD3C-201ENST00000580533 DEPTORQ8TB45 409 aa12.99□□□□□ -0.33
SNORD3C-201ENST00000580533 SPIRE2Q8WWL2 714 aa12.99□□□□□ -0.33
SNORD3C-201ENST00000580533 NLRP7Q8WX94 980 aa12.99□□□□□ -0.33
SNORD3C-201ENST00000580533 TMEM143Q96AN5 459 aa12.99□□□□□ -0.33
SNORD3C-201ENST00000580533 FAM49AQ9H0Q0 323 aaPredicted RBP12.99□□□□□ -0.33
SNORD3C-201ENST00000580533 PANK4Q9NVE7 773 aa12.99□□□□□ -0.33
SNORD3C-201ENST00000580533 ATP11BQ9Y2G3 1177 aa12.99□□□□□ -0.33
SNORD3C-201ENST00000580533 ARID2Q68CP9 1835 aa12.99□□□□□ -0.33
SNORD3C-201ENST00000580533 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.98□□□□□ -0.33
SNORD3C-201ENST00000580533 FRMD3A2A2Y4 597 aa12.98□□□□□ -0.33
SNORD3C-201ENST00000580533 PITPNM1O00562 1244 aa12.98□□□□□ -0.33
SNORD3C-201ENST00000580533 B4GALT4O60513 344 aa12.98□□□□□ -0.33
SNORD3C-201ENST00000580533 RPN1P04843 607 aaKnown RBP12.98□□□□□ -0.33
SNORD3C-201ENST00000580533 CLTBP09497 229 aa12.98□□□□□ -0.33
SNORD3C-201ENST00000580533 ARL2P36404 184 aa12.98□□□□□ -0.33
SNORD3C-201ENST00000580533 THPOP40225 353 aa12.98□□□□□ -0.33
SNORD3C-201ENST00000580533 CLCN3P51790 818 aa12.98□□□□□ -0.33
SNORD3C-201ENST00000580533 ZNF131P52739 623 aa12.98□□□□□ -0.33
SNORD3C-201ENST00000580533 MRPS6P82932 125 aaKnown RBP12.98□□□□□ -0.33
SNORD3C-201ENST00000580533 RAD51AP2Q09MP3 1159 aa12.98□□□□□ -0.33
SNORD3C-201ENST00000580533 LAMTOR4Q0VGL1 99 aa12.98□□□□□ -0.33
SNORD3C-201ENST00000580533 DPYDQ12882 1025 aa12.98□□□□□ -0.33
SNORD3C-201ENST00000580533 STIM1Q13586 685 aa12.98□□□□□ -0.33
SNORD3C-201ENST00000580533 CUL4BQ13620 913 aa12.98□□□□□ -0.33
SNORD3C-201ENST00000580533 KCNB1Q14721 858 aa12.98□□□□□ -0.33
SNORD3C-201ENST00000580533 TRIM60Q495X7 471 aa12.98□□□□□ -0.33
SNORD3C-201ENST00000580533 ARSHQ5FYA8 562 aa12.98□□□□□ -0.33
SNORD3C-201ENST00000580533 FAM178BQ8IXR5 827 aa12.98□□□□□ -0.33
SNORD3C-201ENST00000580533 KIAA0319LQ8IZA0 1049 aa12.98□□□□□ -0.33
SNORD3C-201ENST00000580533 LRRC71Q8N4P6 559 aa12.98□□□□□ -0.33
SNORD3C-201ENST00000580533 LINC01465Q8N7H1 131 aa12.98□□□□□ -0.33
SNORD3C-201ENST00000580533 PRPF31Q8WWY3 499 aaKnown RBP12.98□□□□□ -0.33
SNORD3C-201ENST00000580533 NFKBIZQ9BYH8 718 aa12.98□□□□□ -0.33
SNORD3C-201ENST00000580533 GCOM2Q9BZD3 368 aaPredicted RBP12.98□□□□□ -0.33
SNORD3C-201ENST00000580533 KMT5AQ9NQR1 393 aa12.98□□□□□ -0.33
SNORD3C-201ENST00000580533 XPNPEP1Q9NQW7 623 aa12.98□□□□□ -0.33
SNORD3C-201ENST00000580533 OLFML3Q9NRN5 406 aa12.98□□□□□ -0.33
SNORD3C-201ENST00000580533 TRMT13Q9NUP7 481 aaKnown RBP12.98□□□□□ -0.33
SNORD3C-201ENST00000580533 LRRIQ4A6NIV6 560 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms