RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 SH3GL1Q99961 368 aa7.28□□□□□ -1.24
COPS3-216ENST00000579716 C7orf25Q9BPX7 421 aa7.28□□□□□ -1.24
COPS3-216ENST00000579716 SLC26A6Q9BXS9 759 aa7.28□□□□□ -1.24
COPS3-216ENST00000579716 BCO2Q9BYV7 579 aa7.28□□□□□ -1.24
COPS3-216ENST00000579716 TAOK3Q9H2K8 898 aa7.28□□□□□ -1.24
COPS3-216ENST00000579716 TCP11L1Q9NUJ3 509 aa7.28□□□□□ -1.24
COPS3-216ENST00000579716 FAM53CQ9NYF3 392 aa7.28□□□□□ -1.24
COPS3-216ENST00000579716 PSD3Q9NYI0 1048 aa7.28□□□□□ -1.24
COPS3-216ENST00000579716 RRN3Q9NYV6 651 aa7.28□□□□□ -1.24
COPS3-216ENST00000579716 GPN3Q9UHW5 284 aaPredicted RBP7.28□□□□□ -1.24
COPS3-216ENST00000579716 MAPRE3Q9UPY8 281 aa7.28□□□□□ -1.24
COPS3-216ENST00000579716 TBKBP1A7MCY6 615 aa7.27□□□□□ -1.25
COPS3-216ENST00000579716 HNRNPCL2B2RXH8 293 aa7.27□□□□□ -1.25
COPS3-216ENST00000579716 MASP2O00187 686 aa7.27□□□□□ -1.25
COPS3-216ENST00000579716 IRS4O14654 1257 aaPredicted RBP7.27□□□□□ -1.25
COPS3-216ENST00000579716 AREL1O15033 823 aa7.27□□□□□ -1.25
COPS3-216ENST00000579716 POLR3GO15318 223 aaPredicted RBP7.27□□□□□ -1.25
COPS3-216ENST00000579716 SGSM2O43147 1006 aa7.27□□□□□ -1.25
COPS3-216ENST00000579716 MAFKO60675 156 aa7.27□□□□□ -1.25
COPS3-216ENST00000579716 HNRNPCL1O60812 293 aaKnown RBP7.27□□□□□ -1.25
COPS3-216ENST00000579716 PAGE1O75459 146 aa7.27□□□□□ -1.25
COPS3-216ENST00000579716 GUCA1CO95843 209 aa7.27□□□□□ -1.25
COPS3-216ENST00000579716 CD4P01730 458 aa7.27□□□□□ -1.25
COPS3-216ENST00000579716 CAPNS1P04632 268 aa7.27□□□□□ -1.25
COPS3-216ENST00000579716 C1QTNF9P0C862 333 aa7.27□□□□□ -1.25
COPS3-216ENST00000579716 NME2P22392 152 aa7.27□□□□□ -1.25
COPS3-216ENST00000579716 CD86P42081 329 aa7.27□□□□□ -1.25
COPS3-216ENST00000579716 STAT1P42224 750 aa7.27□□□□□ -1.25
COPS3-216ENST00000579716 GRK6P43250 576 aa7.27□□□□□ -1.25
COPS3-216ENST00000579716 RAP1GAPP47736 663 aa7.27□□□□□ -1.25
COPS3-216ENST00000579716 PMS1P54277 932 aaKnown RBP7.27□□□□□ -1.25
COPS3-216ENST00000579716 ADCY1Q08828 1119 aa7.27□□□□□ -1.25
COPS3-216ENST00000579716 TRAF1Q13077 416 aa7.27□□□□□ -1.25
COPS3-216ENST00000579716 TRIM14Q14142 442 aa7.27□□□□□ -1.25
COPS3-216ENST00000579716 PPP2R5EQ16537 467 aa7.27□□□□□ -1.25
COPS3-216ENST00000579716 ATP13A4Q4VNC1 1196 aa7.27□□□□□ -1.25
COPS3-216ENST00000579716 PRR16Q569H4 304 aa7.27□□□□□ -1.25
COPS3-216ENST00000579716 ANGPTL8Q6UXH0 198 aa7.27□□□□□ -1.25
COPS3-216ENST00000579716 ARHGAP27Q6ZUM4 889 aa7.27□□□□□ -1.25
COPS3-216ENST00000579716 CCDC80Q76M96 950 aa7.27□□□□□ -1.25
COPS3-216ENST00000579716 C12orf40Q86WS4 652 aa7.27□□□□□ -1.25
COPS3-216ENST00000579716 PEX5LQ8IYB4 626 aa7.27□□□□□ -1.25
COPS3-216ENST00000579716 LRRC43Q8N309 656 aa7.27□□□□□ -1.25
COPS3-216ENST00000579716 DDX11Q96FC9 970 aa7.27□□□□□ -1.25
COPS3-216ENST00000579716 DHRS1Q96LJ7 313 aa7.27□□□□□ -1.25
COPS3-216ENST00000579716 IPO9Q96P70 1041 aaKnown RBP7.27□□□□□ -1.25
COPS3-216ENST00000579716 SEC62Q99442 399 aaKnown RBP7.27□□□□□ -1.25
COPS3-216ENST00000579716 BARD1Q99728 777 aaKnown RBP7.27□□□□□ -1.25
COPS3-216ENST00000579716 ALG1Q9BT22 464 aa7.27□□□□□ -1.25
COPS3-216ENST00000579716 PNNQ9H307 717 aaKnown RBP7.27□□□□□ -1.25
COPS3-216ENST00000579716 SSU72Q9NP77 194 aaKnown RBP7.27□□□□□ -1.25
COPS3-216ENST00000579716 TRMT13Q9NUP7 481 aaKnown RBP7.27□□□□□ -1.25
COPS3-216ENST00000579716 HPF1Q9NWY4 346 aa7.27□□□□□ -1.25
COPS3-216ENST00000579716 LAMP5Q9UJQ1 280 aa7.27□□□□□ -1.25
COPS3-216ENST00000579716 MTUS1Q9ULD2 1270 aa7.27□□□□□ -1.25
COPS3-216ENST00000579716 PHLDB1Q86UU1 1377 aa7.27□□□□□ -1.25
COPS3-216ENST00000579716 KDM2BQ8NHM5 1336 aa7.27□□□□□ -1.25
COPS3-216ENST00000579716 KINO60870 393 aaKnown RBP7.26□□□□□ -1.25
COPS3-216ENST00000579716 TBCAO75347 108 aaKnown RBP7.26□□□□□ -1.25
COPS3-216ENST00000579716 DDX58O95786 925 aaKnown RBP7.26□□□□□ -1.25
COPS3-216ENST00000579716 PYGLP06737 847 aa7.26□□□□□ -1.25
COPS3-216ENST00000579716 CAPN2P17655 700 aa7.26□□□□□ -1.25
COPS3-216ENST00000579716 RBM6P78332 1123 aaKnown RBP7.26□□□□□ -1.25
COPS3-216ENST00000579716 PPP2R3AQ06190 1150 aa7.26□□□□□ -1.25
COPS3-216ENST00000579716 COL9A2Q14055 689 aaPredicted RBP7.26□□□□□ -1.25
COPS3-216ENST00000579716 ARHGEF6Q15052 776 aa7.26□□□□□ -1.25
COPS3-216ENST00000579716 DDR2Q16832 855 aa7.26□□□□□ -1.25
COPS3-216ENST00000579716 ANKDD1AQ495B1 522 aa7.26□□□□□ -1.25
COPS3-216ENST00000579716 C5orf22Q49AR2 442 aa7.26□□□□□ -1.25
COPS3-216ENST00000579716 CCDC178Q5BJE1 867 aa7.26□□□□□ -1.25
COPS3-216ENST00000579716 GPR158Q5T848 1215 aa7.26□□□□□ -1.25
COPS3-216ENST00000579716 NXPE4Q6UWF7 544 aa7.26□□□□□ -1.25
COPS3-216ENST00000579716 PACS1Q6VY07 963 aa7.26□□□□□ -1.25
COPS3-216ENST00000579716 GBP6Q6ZN66 633 aa7.26□□□□□ -1.25
COPS3-216ENST00000579716 SAPCD2Q86UD0 394 aa7.26□□□□□ -1.25
COPS3-216ENST00000579716 VSIG1Q86XK7 387 aa7.26□□□□□ -1.25
COPS3-216ENST00000579716 RBM12BQ8IXT5 1001 aaKnown RBP7.26□□□□□ -1.25
COPS3-216ENST00000579716 NRSN1Q8IZ57 195 aa7.26□□□□□ -1.25
COPS3-216ENST00000579716 FAM76AQ8TAV0 307 aa7.26□□□□□ -1.25
COPS3-216ENST00000579716 TEKT4Q8WW24 435 aa7.26□□□□□ -1.25
COPS3-216ENST00000579716 SPATA17Q96L03 361 aa7.26□□□□□ -1.25
COPS3-216ENST00000579716 NECAB3Q96P71 396 aaPredicted RBP7.26□□□□□ -1.25
COPS3-216ENST00000579716 RMDN3Q96TC7 470 aa7.26□□□□□ -1.25
COPS3-216ENST00000579716 MPHOSPH8Q99549 860 aa7.26□□□□□ -1.25
COPS3-216ENST00000579716 CCDC8Q9H0W5 538 aaPredicted RBP7.26□□□□□ -1.25
COPS3-216ENST00000579716 KCTD10Q9H3F6 313 aa7.26□□□□□ -1.25
COPS3-216ENST00000579716 LMCD1Q9NZU5 365 aa7.26□□□□□ -1.25
COPS3-216ENST00000579716 SH3BGRL2Q9UJC5 107 aa7.26□□□□□ -1.25
COPS3-216ENST00000579716 FRMPD2Q68DX3 1309 aaPredicted RBP7.26□□□□□ -1.25
COPS3-216ENST00000579716 DCDC2CA8MYV0 355 aa7.25□□□□□ -1.25
COPS3-216ENST00000579716 ENC1O14682 589 aa7.25□□□□□ -1.25
COPS3-216ENST00000579716 ERC2O15083 957 aa7.25□□□□□ -1.25
COPS3-216ENST00000579716 USO1O60763 962 aaKnown RBP7.25□□□□□ -1.25
COPS3-216ENST00000579716 STAM2O75886 525 aa7.25□□□□□ -1.25
COPS3-216ENST00000579716 SNX4O95219 450 aa7.25□□□□□ -1.25
COPS3-216ENST00000579716 MT-ND3P03897 115 aa7.25□□□□□ -1.25
COPS3-216ENST00000579716 GLI1P08151 1106 aa7.25□□□□□ -1.25
COPS3-216ENST00000579716 THEGLP0DJG4 465 aa7.25□□□□□ -1.25
COPS3-216ENST00000579716 GZMAP12544 262 aa7.25□□□□□ -1.25
COPS3-216ENST00000579716 GNAT2P19087 354 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms