RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 TMEM173Q86WV6 379 aaPredicted RBP15.07■□□□□ 0
CDK5RAP3-213ENST00000579605 MAML2Q8IZL2 1156 aaPredicted RBP15.07■□□□□ 0
CDK5RAP3-213ENST00000579605 SECISBP2LQ93073 1101 aaKnown RBP15.07■□□□□ 0
CDK5RAP3-213ENST00000579605 RTKNQ9BST9 563 aa15.07■□□□□ 0
CDK5RAP3-213ENST00000579605 ARHGEF3Q9NR81 526 aa15.07■□□□□ 0
CDK5RAP3-213ENST00000579605 SPATA6Q9NWH7 488 aaPredicted RBP15.07■□□□□ 0
CDK5RAP3-213ENST00000579605 UBIAD1Q9Y5Z9 338 aa15.07■□□□□ 0
CDK5RAP3-213ENST00000579605 OTOGLQ3ZCN5 2332 aa15.07■□□□□ 0
CDK5RAP3-213ENST00000579605 SALL3Q9BXA9 1300 aa15.07■□□□□ 0
CDK5RAP3-213ENST00000579605 ZC3H11AO75152 810 aaKnown RBP eCLIP15.06■□□□□ 0
CDK5RAP3-213ENST00000579605 SSBP05455 408 aaKnown RBP eCLIP15.06■□□□□ 0
CDK5RAP3-213ENST00000579605 CTSAP10619 480 aa15.06■□□□□ 0
CDK5RAP3-213ENST00000579605 SRFP11831 508 aa15.06■□□□□ 0
CDK5RAP3-213ENST00000579605 LMNB2Q03252 620 aa15.06■□□□□ 0
CDK5RAP3-213ENST00000579605 CSTF1Q05048 431 aaKnown RBP15.06■□□□□ 0
CDK5RAP3-213ENST00000579605 PTPN14Q15678 1187 aa15.06■□□□□ 0
CDK5RAP3-213ENST00000579605 IMMTQ16891 758 aaKnown RBP15.06■□□□□ 0
CDK5RAP3-213ENST00000579605 PHLDB3Q6NSJ2 640 aa15.06■□□□□ 0
CDK5RAP3-213ENST00000579605 DCLRE1AQ6PJP8 1040 aa15.06■□□□□ 0
CDK5RAP3-213ENST00000579605 FAM43BQ6ZT52 329 aaPredicted RBP15.06■□□□□ 0
CDK5RAP3-213ENST00000579605 PPFIBP1Q86W92 1011 aa15.06■□□□□ 0
CDK5RAP3-213ENST00000579605 METTL13Q8N6R0 699 aa15.06■□□□□ 0
CDK5RAP3-213ENST00000579605 ATRIPQ8WXE1 791 aa15.06■□□□□ 0
CDK5RAP3-213ENST00000579605 ZNF668Q96K58 619 aaPredicted RBP15.06■□□□□ 0
CDK5RAP3-213ENST00000579605 JADE2Q9NQC1 790 aa15.06■□□□□ 0
CDK5RAP3-213ENST00000579605 BACH1O14867 736 aa15.05■□□□□ -0
CDK5RAP3-213ENST00000579605 LAMTOR5O43504 91 aa15.05■□□□□ -0
CDK5RAP3-213ENST00000579605 HBP1O60381 514 aa15.05■□□□□ -0
CDK5RAP3-213ENST00000579605 PDE1AP54750 535 aa15.05■□□□□ -0
CDK5RAP3-213ENST00000579605 GIT2Q14161 759 aa15.05■□□□□ -0
CDK5RAP3-213ENST00000579605 UBE2SQ16763 222 aa15.05■□□□□ -0
CDK5RAP3-213ENST00000579605 LONRF3Q496Y0 759 aa15.05■□□□□ -0
CDK5RAP3-213ENST00000579605 PPM1JQ5JR12 505 aa15.05■□□□□ -0
CDK5RAP3-213ENST00000579605 PJA1Q8NG27 643 aa15.05■□□□□ -0
CDK5RAP3-213ENST00000579605 MYADMQ96S97 322 aa15.05■□□□□ -0
CDK5RAP3-213ENST00000579605 SDF4Q9BRK5 362 aa15.05■□□□□ -0
CDK5RAP3-213ENST00000579605 CNNM2Q9H8M5 875 aa15.05■□□□□ -0
CDK5RAP3-213ENST00000579605 SENP2Q9HC62 589 aa15.05■□□□□ -0
CDK5RAP3-213ENST00000579605 GPR179Q6PRD1 2367 aa15.05■□□□□ -0
CDK5RAP3-213ENST00000579605 CCDC195A0A1B0GUA6 201 aa15.04■□□□□ -0
CDK5RAP3-213ENST00000579605 PIK3CDO00329 1044 aa15.04■□□□□ -0
CDK5RAP3-213ENST00000579605 GPR32O75388 356 aa15.04■□□□□ -0
CDK5RAP3-213ENST00000579605 POLGP54098 1239 aaPredicted RBP15.04■□□□□ -0
CDK5RAP3-213ENST00000579605 DDX53Q86TM3 631 aaKnown RBP15.04■□□□□ -0
CDK5RAP3-213ENST00000579605 BCL7CQ8WUZ0 217 aaPredicted RBP15.04■□□□□ -0
CDK5RAP3-213ENST00000579605 KLHL5Q96PQ7 755 aa15.04■□□□□ -0
CDK5RAP3-213ENST00000579605 KCNH7Q9NS40 1196 aa15.04■□□□□ -0
CDK5RAP3-213ENST00000579605 SMG5Q9UPR3 1016 aaKnown RBP15.04■□□□□ -0
CDK5RAP3-213ENST00000579605 IRAK3Q9Y616 596 aa15.04■□□□□ -0
CDK5RAP3-213ENST00000579605 BAHCC1Q9P281 2608 aa15.04■□□□□ -0
CDK5RAP3-213ENST00000579605 MAP1BP46821 2468 aaKnown RBP15.03■□□□□ -0
CDK5RAP3-213ENST00000579605 DDX39AO00148 427 aaKnown RBP15.03■□□□□ -0
CDK5RAP3-213ENST00000579605 IFIT3O14879 490 aaKnown RBP15.03■□□□□ -0
CDK5RAP3-213ENST00000579605 SPTLC1O15269 473 aa15.03■□□□□ -0
CDK5RAP3-213ENST00000579605 MAFGO15525 162 aa15.03■□□□□ -0
CDK5RAP3-213ENST00000579605 SDSP20132 328 aa15.03■□□□□ -0
CDK5RAP3-213ENST00000579605 FGFR4P22455 802 aa15.03■□□□□ -0
CDK5RAP3-213ENST00000579605 CLCN4P51793 760 aa15.03■□□□□ -0
CDK5RAP3-213ENST00000579605 ZNF484Q5JVG2 852 aa15.03■□□□□ -0
CDK5RAP3-213ENST00000579605 CWC27Q6UX04 472 aaKnown RBP15.03■□□□□ -0
CDK5RAP3-213ENST00000579605 C15orf39Q6ZRI6 1047 aa15.03■□□□□ -0
CDK5RAP3-213ENST00000579605 CKAP2LQ8IYA6 745 aa15.03■□□□□ -0
CDK5RAP3-213ENST00000579605 RRP36Q96EU6 259 aaKnown RBP15.03■□□□□ -0
CDK5RAP3-213ENST00000579605 IGSF21Q96ID5 467 aa15.03■□□□□ -0
CDK5RAP3-213ENST00000579605 EMILIN2Q9BXX0 1053 aa15.03■□□□□ -0
CDK5RAP3-213ENST00000579605 MRPL9Q9BYD2 267 aaKnown RBP15.03■□□□□ -0
CDK5RAP3-213ENST00000579605 GBP3Q9H0R5 595 aa15.03■□□□□ -0
CDK5RAP3-213ENST00000579605 PSTPIP2Q9H939 334 aa15.03■□□□□ -0
CDK5RAP3-213ENST00000579605 LOXHD1Q8IVV2 1947 aa15.03■□□□□ -0
CDK5RAP3-213ENST00000579605 CHD6Q8TD26 2715 aa15.02■□□□□ -0
CDK5RAP3-213ENST00000579605 SPDYE3A6NKU9 549 aa15.02■□□□□ -0
CDK5RAP3-213ENST00000579605 CNPP09543 421 aaKnown RBP15.02■□□□□ -0
CDK5RAP3-213ENST00000579605 NLRP11P59045 1033 aaKnown RBP15.02■□□□□ -0
CDK5RAP3-213ENST00000579605 PDXDC2PQ6P474 469 aa15.02■□□□□ -0
CDK5RAP3-213ENST00000579605 STAMQ92783 540 aa15.02■□□□□ -0
CDK5RAP3-213ENST00000579605 BCO2Q9BYV7 579 aa15.02■□□□□ -0
CDK5RAP3-213ENST00000579605 WDR6Q9NNW5 1121 aaKnown RBP15.02■□□□□ -0
CDK5RAP3-213ENST00000579605 PARD6AQ9NPB6 346 aa15.02■□□□□ -0
CDK5RAP3-213ENST00000579605 MAN1C1Q9NR34 630 aa15.02■□□□□ -0
CDK5RAP3-213ENST00000579605 EPS15L1Q9UBC2 864 aa15.02■□□□□ -0
CDK5RAP3-213ENST00000579605 PCDHA6Q9UN73 950 aa15.02■□□□□ -0
CDK5RAP3-213ENST00000579605 AKT3Q9Y243 479 aa15.02■□□□□ -0
CDK5RAP3-213ENST00000579605 INPP5FQ9Y2H2 1132 aa15.02■□□□□ -0
CDK5RAP3-213ENST00000579605 PCDHA8Q9Y5H6 950 aa15.02■□□□□ -0
CDK5RAP3-213ENST00000579605 CLUHO75153 1309 aa15.01□□□□□ -0.01
CDK5RAP3-213ENST00000579605 ERICH2A1L162 156 aa15.01□□□□□ -0.01
CDK5RAP3-213ENST00000579605 ZBTB42B2RXF5 422 aa15.01□□□□□ -0.01
CDK5RAP3-213ENST00000579605 C2CD2LO14523 706 aa15.01□□□□□ -0.01
CDK5RAP3-213ENST00000579605 GALTP07902 379 aa15.01□□□□□ -0.01
CDK5RAP3-213ENST00000579605 TGM1P22735 817 aa15.01□□□□□ -0.01
CDK5RAP3-213ENST00000579605 SLC26A2P50443 739 aa15.01□□□□□ -0.01
CDK5RAP3-213ENST00000579605 CLCN3P51790 818 aa15.01□□□□□ -0.01
CDK5RAP3-213ENST00000579605 RNASELQ05823 741 aaKnown RBP15.01□□□□□ -0.01
CDK5RAP3-213ENST00000579605 ITGB3BPQ13352 177 aaPredicted RBP15.01□□□□□ -0.01
CDK5RAP3-213ENST00000579605 SNW1Q13573 536 aaKnown RBP15.01□□□□□ -0.01
CDK5RAP3-213ENST00000579605 UBXN2BQ14CS0 331 aa15.01□□□□□ -0.01
CDK5RAP3-213ENST00000579605 WTAPQ15007 396 aa15.01□□□□□ -0.01
CDK5RAP3-213ENST00000579605 ZNF528Q3MIS6 628 aa15.01□□□□□ -0.01
CDK5RAP3-213ENST00000579605 FAM160B1Q5W0V3 765 aa15.01□□□□□ -0.01
CDK5RAP3-213ENST00000579605 TSSK4Q6SA08 328 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms