RNA–Protein interactions for RNA: ENST00000578348.5

GGA3-205, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-205ENST00000578348 PNMA2Q9UL42 364 aa12.46□□□□□ -0.41
GGA3-205ENST00000578348 RPTORQ8N122 1335 aa12.46□□□□□ -0.41
GGA3-205ENST00000578348 A0A087WUV0 522 aaPredicted RBP12.46□□□□□ -0.42
GGA3-205ENST00000578348 KCNK3O14649 394 aa12.46□□□□□ -0.42
GGA3-205ENST00000578348 CETN3O15182 167 aa12.46□□□□□ -0.42
GGA3-205ENST00000578348 RAD51CO43502 376 aa12.46□□□□□ -0.42
GGA3-205ENST00000578348 ZEB2O60315 1214 aa12.46□□□□□ -0.42
GGA3-205ENST00000578348 CASP5P51878 434 aa12.46□□□□□ -0.42
GGA3-205ENST00000578348 DCAF15Q66K64 600 aa12.46□□□□□ -0.42
GGA3-205ENST00000578348 NIPA1Q7RTP0 329 aa12.46□□□□□ -0.42
GGA3-205ENST00000578348 USP38Q8NB14 1042 aa12.46□□□□□ -0.42
GGA3-205ENST00000578348 TAF4BQ92750 862 aa12.46□□□□□ -0.42
GGA3-205ENST00000578348 SPAG5Q96R06 1193 aa12.46□□□□□ -0.42
GGA3-205ENST00000578348 CNOT7Q9UIV1 285 aaKnown RBP12.46□□□□□ -0.42
GGA3-205ENST00000578348 HACL1Q9UJ83 578 aa12.46□□□□□ -0.42
GGA3-205ENST00000578348 SCAF8Q9UPN6 1271 aaKnown RBP12.46□□□□□ -0.42
GGA3-205ENST00000578348 NDUFAB1O14561 156 aa12.45□□□□□ -0.42
GGA3-205ENST00000578348 TBCAO75347 108 aaKnown RBP12.45□□□□□ -0.42
GGA3-205ENST00000578348 GAP43P17677 238 aa12.45□□□□□ -0.42
GGA3-205ENST00000578348 SLC9A1P19634 815 aa12.45□□□□□ -0.42
GGA3-205ENST00000578348 LIG3P49916 1009 aa12.45□□□□□ -0.42
GGA3-205ENST00000578348 TNNC1P63316 161 aa12.45□□□□□ -0.42
GGA3-205ENST00000578348 UBXN2AP68543 259 aa12.45□□□□□ -0.42
GGA3-205ENST00000578348 TBC1D10BQ4KMP7 808 aaPredicted RBP12.45□□□□□ -0.42
GGA3-205ENST00000578348 EPM2AIP1Q7L775 607 aaPredicted RBP12.45□□□□□ -0.42
GGA3-205ENST00000578348 SAMD7Q7Z3H4 446 aa12.45□□□□□ -0.42
GGA3-205ENST00000578348 SFR1Q86XK3 245 aa12.45□□□□□ -0.42
GGA3-205ENST00000578348 CLEC4DQ8WXI8 215 aa12.45□□□□□ -0.42
GGA3-205ENST00000578348 PIK3R5Q8WYR1 880 aa12.45□□□□□ -0.42
GGA3-205ENST00000578348 DYDC2Q96IM9 177 aa12.45□□□□□ -0.42
GGA3-205ENST00000578348 MXRA8Q9BRK3 442 aa12.45□□□□□ -0.42
GGA3-205ENST00000578348 ZNF577Q9BSK1 485 aa12.45□□□□□ -0.42
GGA3-205ENST00000578348 TEKT3Q9BXF9 490 aa12.45□□□□□ -0.42
GGA3-205ENST00000578348 BHMT2Q9H2M3 363 aa12.45□□□□□ -0.42
GGA3-205ENST00000578348 MAP3K20Q9NYL2 800 aaKnown RBP12.45□□□□□ -0.42
GGA3-205ENST00000578348 RGL1Q9NZL6 768 aa12.45□□□□□ -0.42
GGA3-205ENST00000578348 GJA3Q9Y6H8 435 aa12.45□□□□□ -0.42
GGA3-205ENST00000578348 CHRM1P11229 460 aaPredicted RBP12.45□□□□□ -0.42
GGA3-205ENST00000578348 BCRP11274 1271 aa12.45□□□□□ -0.42
GGA3-205ENST00000578348 EPHA7Q15375 998 aa12.45□□□□□ -0.42
GGA3-205ENST00000578348 RPS6KA1Q15418 735 aa12.45□□□□□ -0.42
GGA3-205ENST00000578348 BMT2Q1RMZ1 405 aa12.45□□□□□ -0.42
GGA3-205ENST00000578348 ICE2Q659A1 982 aa12.45□□□□□ -0.42
GGA3-205ENST00000578348 ZNF571Q7Z3V5 609 aaPredicted RBP12.45□□□□□ -0.42
GGA3-205ENST00000578348 NEK9Q8TD19 979 aa12.45□□□□□ -0.42
GGA3-205ENST00000578348 RNPC3Q96LT9 517 aaKnown RBP12.45□□□□□ -0.42
GGA3-205ENST00000578348 RIT2Q99578 217 aa12.45□□□□□ -0.42
GGA3-205ENST00000578348 SGIP1Q9BQI5 828 aa12.45□□□□□ -0.42
GGA3-205ENST00000578348 RUSC1Q9BVN2 902 aa12.45□□□□□ -0.42
GGA3-205ENST00000578348 SLC38A10Q9HBR0 1119 aa12.45□□□□□ -0.42
GGA3-205ENST00000578348 LOXHD1Q8IVV2 1947 aa12.45□□□□□ -0.42
GGA3-205ENST00000578348 SLITRK3O94933 977 aa12.44□□□□□ -0.42
GGA3-205ENST00000578348 FDX1P10109 184 aa12.44□□□□□ -0.42
GGA3-205ENST00000578348 UCHL3P15374 230 aa12.44□□□□□ -0.42
GGA3-205ENST00000578348 GUCY1A3Q02108 690 aa12.44□□□□□ -0.42
GGA3-205ENST00000578348 CTTNQ14247 550 aaKnown RBP12.44□□□□□ -0.42
GGA3-205ENST00000578348 HLTFQ14527 1009 aaKnown RBP eCLIP12.44□□□□□ -0.423e-6■■□□□ 13
GGA3-205ENST00000578348 DCAF17Q5H9S7 520 aaPredicted RBP12.44□□□□□ -0.42
GGA3-205ENST00000578348 B3GNT9Q6UX72 402 aa12.44□□□□□ -0.42
GGA3-205ENST00000578348 MAATS1Q7Z4T9 603 aa12.44□□□□□ -0.42
GGA3-205ENST00000578348 MREGQ8N565 214 aa12.44□□□□□ -0.42
GGA3-205ENST00000578348 WHAMMQ8TF30 809 aa12.44□□□□□ -0.42
GGA3-205ENST00000578348 UNC45AQ9H3U1 944 aa12.44□□□□□ -0.42
GGA3-205ENST00000578348 PPP1R9AQ9ULJ8 1098 aa12.44□□□□□ -0.42
GGA3-205ENST00000578348 TRAF3IP3Q9Y228 551 aa12.44□□□□□ -0.42
GGA3-205ENST00000578348 ASTN2O75129 1339 aaPredicted RBP12.44□□□□□ -0.42
GGA3-205ENST00000578348 NFIBO00712 420 aa12.44□□□□□ -0.42
GGA3-205ENST00000578348 CHMP2AO43633 222 aa12.44□□□□□ -0.42
GGA3-205ENST00000578348 ERLIN2O94905 339 aa12.44□□□□□ -0.42
GGA3-205ENST00000578348 ARP10275 920 aa12.44□□□□□ -0.42
GGA3-205ENST00000578348 VCAM1P19320 739 aa12.44□□□□□ -0.42
GGA3-205ENST00000578348 GTF2A1P52655 376 aaPredicted RBP12.44□□□□□ -0.42
GGA3-205ENST00000578348 KCTD19Q17RG1 926 aaPredicted RBP12.44□□□□□ -0.42
GGA3-205ENST00000578348 KNOP1Q1ED39 458 aaKnown RBP12.44□□□□□ -0.42
GGA3-205ENST00000578348 RINT1Q6NUQ1 792 aa12.44□□□□□ -0.42
GGA3-205ENST00000578348 KDM7AQ6ZMT4 941 aa12.44□□□□□ -0.42
GGA3-205ENST00000578348 IRF2BP2Q7Z5L9 587 aa12.44□□□□□ -0.42
GGA3-205ENST00000578348 APOBEC3FQ8IUX4 373 aaKnown RBP12.44□□□□□ -0.42
GGA3-205ENST00000578348 TPH2Q8IWU9 490 aa12.44□□□□□ -0.42
GGA3-205ENST00000578348 OLFML3Q9NRN5 406 aa12.44□□□□□ -0.42
GGA3-205ENST00000578348 ARMCX3Q9UH62 379 aaPredicted RBP12.44□□□□□ -0.42
GGA3-205ENST00000578348 ZNF112Q9UJU3 913 aa12.44□□□□□ -0.42
GGA3-205ENST00000578348 FRMPD4Q14CM0 1322 aa12.44□□□□□ -0.42
GGA3-205ENST00000578348 A6NNZ2 444 aa12.43□□□□□ -0.42
GGA3-205ENST00000578348 IPO5O00410 1097 aaKnown RBP12.43□□□□□ -0.42
GGA3-205ENST00000578348 CALUO43852 315 aaPredicted RBP12.43□□□□□ -0.42
GGA3-205ENST00000578348 CEP104O60308 925 aa12.43□□□□□ -0.42
GGA3-205ENST00000578348 KIF4AO95239 1232 aa12.43□□□□□ -0.42
GGA3-205ENST00000578348 AFPP02771 609 aaKnown RBP12.43□□□□□ -0.42
GGA3-205ENST00000578348 NR1D1P20393 614 aa12.43□□□□□ -0.42
GGA3-205ENST00000578348 MTMR2Q13614 643 aa12.43□□□□□ -0.42
GGA3-205ENST00000578348 EXOC3L4Q17RC7 722 aa12.43□□□□□ -0.42
GGA3-205ENST00000578348 TUBB8Q3ZCM7 444 aa12.43□□□□□ -0.42
GGA3-205ENST00000578348 NBPF12Q5TAG4 269 aaPredicted RBP12.43□□□□□ -0.42
GGA3-205ENST00000578348 TCERG1LQ5VWI1 586 aa12.43□□□□□ -0.42
GGA3-205ENST00000578348 SCYL3Q8IZE3 742 aa12.43□□□□□ -0.42
GGA3-205ENST00000578348 PROCA1Q8NCQ7 364 aaPredicted RBP12.43□□□□□ -0.42
GGA3-205ENST00000578348 NACC1Q96RE7 527 aa12.43□□□□□ -0.42
GGA3-205ENST00000578348 AP1M1Q9BXS5 423 aa12.43□□□□□ -0.42
GGA3-205ENST00000578348 TAF1DQ9H5J8 278 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms