RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 FAM228AQ86W67 206 aa25.77■■□□□ 1.72
LIMD2-204ENST00000578297 RHPN2Q8IUC4 686 aa25.77■■□□□ 1.72
LIMD2-204ENST00000578297 TCP11Q8WWU5 503 aa25.77■■□□□ 1.72
LIMD2-204ENST00000578297 NLRP7Q8WX94 980 aa25.77■■□□□ 1.72
LIMD2-204ENST00000578297 TSPYL2Q9H2G4 693 aaPredicted RBP25.77■■□□□ 1.72
LIMD2-204ENST00000578297 TMX1Q9H3N1 280 aa25.77■■□□□ 1.72
LIMD2-204ENST00000578297 DBR1Q9UK59 544 aaKnown RBP25.77■■□□□ 1.72
LIMD2-204ENST00000578297 CHD9Q3L8U1 2897 aa25.77■■□□□ 1.72
LIMD2-204ENST00000578297 DGAT1O75907 488 aa25.76■■□□□ 1.71
LIMD2-204ENST00000578297 BMP15O95972 392 aa25.76■■□□□ 1.71
LIMD2-204ENST00000578297 CA3P07451 260 aa25.76■■□□□ 1.71
LIMD2-204ENST00000578297 DARSP14868 501 aaKnown RBP25.76■■□□□ 1.71
LIMD2-204ENST00000578297 CCT6AP40227 531 aaKnown RBP25.76■■□□□ 1.71
LIMD2-204ENST00000578297 POTEGQ6S5H5 508 aa25.76■■□□□ 1.71
LIMD2-204ENST00000578297 ZNF410Q86VK4 478 aa25.76■■□□□ 1.71
LIMD2-204ENST00000578297 LINC01599Q8WXQ3 324 aa25.76■■□□□ 1.71
LIMD2-204ENST00000578297 TMEM143Q96AN5 459 aa25.76■■□□□ 1.71
LIMD2-204ENST00000578297 ZNF668Q96K58 619 aaPredicted RBP25.76■■□□□ 1.71
LIMD2-204ENST00000578297 CCDC43Q96MW1 224 aaKnown RBP25.76■■□□□ 1.71
LIMD2-204ENST00000578297 SCLT1Q96NL6 688 aa25.76■■□□□ 1.71
LIMD2-204ENST00000578297 GUCD1Q96NT3 240 aa25.76■■□□□ 1.71
LIMD2-204ENST00000578297 MTRQ99707 1265 aa25.76■■□□□ 1.71
LIMD2-204ENST00000578297 INSL6Q9Y581 213 aa25.76■■□□□ 1.71
LIMD2-204ENST00000578297 A0A087WWV3 80 aa25.75■■□□□ 1.71
LIMD2-204ENST00000578297 HTRA4P83105 476 aaPredicted RBP25.75■■□□□ 1.71
LIMD2-204ENST00000578297 PPP2R2DQ66LE6 453 aa25.75■■□□□ 1.71
LIMD2-204ENST00000578297 FAM117BQ6P1L5 589 aa25.75■■□□□ 1.71
LIMD2-204ENST00000578297 PSPC1Q8WXF1 523 aaKnown RBP25.75■■□□□ 1.71
LIMD2-204ENST00000578297 GCOM2Q9BZD3 368 aaPredicted RBP25.75■■□□□ 1.71
LIMD2-204ENST00000578297 ZSCAN16Q9H4T2 348 aaPredicted RBP25.75■■□□□ 1.71
LIMD2-204ENST00000578297 XPNPEP1Q9NQW7 623 aa25.75■■□□□ 1.71
LIMD2-204ENST00000578297 COL4A3BPQ9Y5P4 624 aa25.75■■□□□ 1.71
LIMD2-204ENST00000578297 A0A087WZ62 844 aa25.74■■□□□ 1.71
LIMD2-204ENST00000578297 ASAP2O43150 1006 aa25.74■■□□□ 1.71
LIMD2-204ENST00000578297 UPP2O95045 317 aa25.74■■□□□ 1.71
LIMD2-204ENST00000578297 PDIA4P13667 645 aaKnown RBP25.74■■□□□ 1.71
LIMD2-204ENST00000578297 ECM1Q16610 540 aa25.74■■□□□ 1.71
LIMD2-204ENST00000578297 KRT79Q5XKE5 535 aa25.74■■□□□ 1.71
LIMD2-204ENST00000578297 SNX29Q8TEQ0 813 aa25.74■■□□□ 1.71
LIMD2-204ENST00000578297 PRPF31Q8WWY3 499 aaKnown RBP25.74■■□□□ 1.71
LIMD2-204ENST00000578297 FDXACB1Q9BRP7 624 aaPredicted RBP25.74■■□□□ 1.71
LIMD2-204ENST00000578297 ATP6V0A4Q9HBG4 840 aa25.74■■□□□ 1.71
LIMD2-204ENST00000578297 BMP2KQ9NSY1 1161 aaPredicted RBP25.74■■□□□ 1.71
LIMD2-204ENST00000578297 TTC3P53804 2025 aa25.73■■□□□ 1.71
LIMD2-204ENST00000578297 MGEA5O60502 916 aa25.73■■□□□ 1.71
LIMD2-204ENST00000578297 GRIN2CQ14957 1233 aa25.73■■□□□ 1.71
LIMD2-204ENST00000578297 SF3A1Q15459 793 aaKnown RBP25.73■■□□□ 1.71
LIMD2-204ENST00000578297 KSR1Q8IVT5 923 aa25.73■■□□□ 1.71
LIMD2-204ENST00000578297 CDX2Q99626 313 aaPredicted RBP25.73■■□□□ 1.71
LIMD2-204ENST00000578297 INO80BQ9C086 356 aaPredicted RBP25.73■■□□□ 1.71
LIMD2-204ENST00000578297 LCHNA4D1U4 455 aa25.72■■□□□ 1.71
LIMD2-204ENST00000578297 VWA3AA6NCI4 1184 aa25.72■■□□□ 1.71
LIMD2-204ENST00000578297 PP2D1A8MPX8 630 aa25.72■■□□□ 1.71
LIMD2-204ENST00000578297 LAMTOR4Q0VGL1 99 aa25.72■■□□□ 1.71
LIMD2-204ENST00000578297 CRIPAKQ8N1N5 446 aa25.72■■□□□ 1.71
LIMD2-204ENST00000578297 NLRP4Q96MN2 994 aa25.72■■□□□ 1.71
LIMD2-204ENST00000578297 MMTAG2Q9BU76 263 aaKnown RBP25.72■■□□□ 1.71
LIMD2-204ENST00000578297 IFT122Q9HBG6 1241 aa25.72■■□□□ 1.71
LIMD2-204ENST00000578297 RGS18Q9NS28 235 aa25.72■■□□□ 1.71
LIMD2-204ENST00000578297 KIAA1024Q9UPX6 916 aa25.72■■□□□ 1.71
LIMD2-204ENST00000578297 DENND3A2RUS2 1198 aa25.71■■□□□ 1.71
LIMD2-204ENST00000578297 ARHGEF15O94989 841 aa25.71■■□□□ 1.71
LIMD2-204ENST00000578297 CDC25AP30304 524 aa25.71■■□□□ 1.71
LIMD2-204ENST00000578297 TAP1Q03518 808 aa25.71■■□□□ 1.71
LIMD2-204ENST00000578297 DSC3Q14574 896 aa25.71■■□□□ 1.71
LIMD2-204ENST00000578297 MXD4Q14582 209 aaPredicted RBP25.71■■□□□ 1.71
LIMD2-204ENST00000578297 SP7Q8TDD2 431 aaPredicted RBP25.71■■□□□ 1.71
LIMD2-204ENST00000578297 ADAM2Q99965 735 aa25.71■■□□□ 1.71
LIMD2-204ENST00000578297 C1orf112Q9NSG2 853 aa25.71■■□□□ 1.71
LIMD2-204ENST00000578297 DDX19AQ9NUU7 478 aaKnown RBP25.71■■□□□ 1.71
LIMD2-204ENST00000578297 CHD7Q9P2D1 2997 aa25.71■■□□□ 1.71
LIMD2-204ENST00000578297 USO1O60763 962 aaKnown RBP25.7■■□□□ 1.7
LIMD2-204ENST00000578297 ARL2P36404 184 aa25.7■■□□□ 1.7
LIMD2-204ENST00000578297 FAM173BQ6P4H8 233 aa25.7■■□□□ 1.7
LIMD2-204ENST00000578297 AK8Q96MA6 479 aa25.7■■□□□ 1.7
LIMD2-204ENST00000578297 YME1L1Q96TA2 773 aa25.7■■□□□ 1.7
LIMD2-204ENST00000578297 CLIC4Q9Y696 253 aa25.7■■□□□ 1.7
LIMD2-204ENST00000578297 ARHGEF35A5YM69 484 aa25.69■■□□□ 1.7
LIMD2-204ENST00000578297 CSDE1O75534 798 aaKnown RBP25.69■■□□□ 1.7
LIMD2-204ENST00000578297 SRGAP2CP0DJJ0 459 aa25.69■■□□□ 1.7
LIMD2-204ENST00000578297 FGFR4P22455 802 aa25.69■■□□□ 1.7
LIMD2-204ENST00000578297 SFPQP23246 707 aaKnown RBP eCLIP25.69■■□□□ 1.7
LIMD2-204ENST00000578297 SARSP49591 514 aaKnown RBP25.69■■□□□ 1.7
LIMD2-204ENST00000578297 HYIQ5T013 277 aa25.69■■□□□ 1.7
LIMD2-204ENST00000578297 SLC24A5Q71RS6 500 aa25.69■■□□□ 1.7
LIMD2-204ENST00000578297 NPAS4Q8IUM7 802 aa25.69■■□□□ 1.7
LIMD2-204ENST00000578297 MCPH1Q8NEM0 835 aa25.69■■□□□ 1.7
LIMD2-204ENST00000578297 STXBP5LQ9Y2K9 1186 aa25.69■■□□□ 1.7
LIMD2-204ENST00000578297 LINC01553A4QN01 128 aa25.68■■□□□ 1.7
LIMD2-204ENST00000578297 C9IYK1 514 aa25.68■■□□□ 1.7
LIMD2-204ENST00000578297 STAG3L1P0CL83 205 aa25.68■■□□□ 1.7
LIMD2-204ENST00000578297 ZSCAN20P17040 1043 aaPredicted RBP25.68■■□□□ 1.7
LIMD2-204ENST00000578297 POU5F1BQ06416 359 aa25.68■■□□□ 1.7
LIMD2-204ENST00000578297 PTPAQ15257 358 aa25.68■■□□□ 1.7
LIMD2-204ENST00000578297 PADI6Q6TGC4 694 aa25.68■■□□□ 1.7
LIMD2-204ENST00000578297 SRGAP1Q7Z6B7 1085 aa25.68■■□□□ 1.7
LIMD2-204ENST00000578297 KCTD17Q8N5Z5 321 aa25.68■■□□□ 1.7
LIMD2-204ENST00000578297 RNF149Q8NC42 400 aa25.68■■□□□ 1.7
LIMD2-204ENST00000578297 SPRYD3Q8NCJ5 442 aa25.68■■□□□ 1.7
LIMD2-204ENST00000578297 BHMT2Q9H2M3 363 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms