RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 EXOC3L4Q17RC7 722 aa30.32■■■□□ 2.44
LIMD2-203ENST00000578067 SFMBT2Q5VUG0 894 aa30.32■■■□□ 2.44
LIMD2-203ENST00000578067 CGNQ9P2M7 1197 aaKnown RBP30.32■■■□□ 2.44
LIMD2-203ENST00000578067 RBPJLQ9UBG7 517 aa30.32■■■□□ 2.44
LIMD2-203ENST00000578067 APBA1Q02410 837 aa30.32■■■□□ 2.44
LIMD2-203ENST00000578067 SPA17Q15506 151 aa30.32■■■□□ 2.44
LIMD2-203ENST00000578067 CYFIP1Q7L576 1253 aa30.32■■■□□ 2.44
LIMD2-203ENST00000578067 GTPBP10A4D1E9 387 aaKnown RBP30.31■■■□□ 2.44
LIMD2-203ENST00000578067 SLC9A1P19634 815 aa30.31■■■□□ 2.44
LIMD2-203ENST00000578067 NCBP1Q09161 790 aaKnown RBP30.31■■■□□ 2.44
LIMD2-203ENST00000578067 GPAT2Q6NUI2 795 aa30.31■■■□□ 2.44
LIMD2-203ENST00000578067 DPY19L2P1Q6NXN4 242 aa30.31■■■□□ 2.44
LIMD2-203ENST00000578067 GBP6Q6ZN66 633 aa30.31■■■□□ 2.44
LIMD2-203ENST00000578067 SLC35F6Q8N357 371 aa30.31■■■□□ 2.44
LIMD2-203ENST00000578067 TMEM174Q8WUU8 243 aa30.31■■■□□ 2.44
LIMD2-203ENST00000578067 DEF6Q9H4E7 631 aa30.31■■■□□ 2.44
LIMD2-203ENST00000578067 TXNRD2Q9NNW7 524 aa30.31■■■□□ 2.44
LIMD2-203ENST00000578067 SLC16A4O15374 487 aa30.3■■■□□ 2.44
LIMD2-203ENST00000578067 ATG7O95352 703 aa30.3■■■□□ 2.44
LIMD2-203ENST00000578067 PON1P27169 355 aa30.3■■■□□ 2.44
LIMD2-203ENST00000578067 KIF11P52732 1056 aa30.3■■■□□ 2.44
LIMD2-203ENST00000578067 PRKCEQ02156 737 aa30.3■■■□□ 2.44
LIMD2-203ENST00000578067 DHX30Q7L2E3 1194 aaKnown RBP eCLIP30.3■■■□□ 2.44
LIMD2-203ENST00000578067 ZNF710Q8N1W2 664 aa30.3■■■□□ 2.44
LIMD2-203ENST00000578067 KIFAP3Q92845 792 aa30.3■■■□□ 2.44
LIMD2-203ENST00000578067 GUCA1BQ9UMX6 200 aa30.3■■■□□ 2.44
LIMD2-203ENST00000578067 EXOC3O60645 756 aa30.3■■■□□ 2.44
LIMD2-203ENST00000578067 MAPK8IP2Q13387 824 aaPredicted RBP30.3■■■□□ 2.44
LIMD2-203ENST00000578067 CCDC122Q5T0U0 273 aa30.3■■■□□ 2.44
LIMD2-203ENST00000578067 C12orf56Q8IXR9 622 aa30.3■■■□□ 2.44
LIMD2-203ENST00000578067 JAKMIP2Q96AA8 810 aa30.3■■■□□ 2.44
LIMD2-203ENST00000578067 DOCK5Q9H7D0 1870 aa30.3■■■□□ 2.44
LIMD2-203ENST00000578067 IGSF9BQ9UPX0 1349 aa30.29■■■□□ 2.44
LIMD2-203ENST00000578067 SSU72P8A0A1W2PR75 194 aa30.29■■■□□ 2.44
LIMD2-203ENST00000578067 LCA5LO95447 670 aa30.29■■■□□ 2.44
LIMD2-203ENST00000578067 SMTNP53814 917 aa30.29■■■□□ 2.44
LIMD2-203ENST00000578067 SNRPFP62306 86 aaKnown RBP30.29■■■□□ 2.44
LIMD2-203ENST00000578067 CYP27A1Q02318 531 aa30.29■■■□□ 2.44
LIMD2-203ENST00000578067 PPP2R5AQ15172 486 aa30.29■■■□□ 2.44
LIMD2-203ENST00000578067 HGSNATQ68CP4 663 aa30.29■■■□□ 2.44
LIMD2-203ENST00000578067 TRIM10Q9UDY6 481 aa30.29■■■□□ 2.44
LIMD2-203ENST00000578067 SEPT9Q9UHD8 586 aaPredicted RBP30.29■■■□□ 2.44
LIMD2-203ENST00000578067 ZNF263O14978 683 aa30.29■■■□□ 2.44
LIMD2-203ENST00000578067 KRT86O43790 486 aa30.29■■■□□ 2.44
LIMD2-203ENST00000578067 GRIN3BO60391 1043 aa30.29■■■□□ 2.44
LIMD2-203ENST00000578067 DGAT1O75907 488 aa30.29■■■□□ 2.44
LIMD2-203ENST00000578067 ACTN1P12814 892 aa30.29■■■□□ 2.44
LIMD2-203ENST00000578067 GJA5P36382 358 aa30.29■■■□□ 2.44
LIMD2-203ENST00000578067 SNAPC2Q13487 334 aa30.29■■■□□ 2.44
LIMD2-203ENST00000578067 NAA30Q147X3 362 aaPredicted RBP30.29■■■□□ 2.44
LIMD2-203ENST00000578067 SLC9C1Q4G0N8 1177 aa30.29■■■□□ 2.44
LIMD2-203ENST00000578067 XKR3Q5GH77 459 aa30.29■■■□□ 2.44
LIMD2-203ENST00000578067 KLHDC7AQ5VTJ3 777 aa30.29■■■□□ 2.44
LIMD2-203ENST00000578067 R3HDMLQ9H3Y0 253 aa30.29■■■□□ 2.44
LIMD2-203ENST00000578067 C17orf75Q9HAS0 396 aa30.29■■■□□ 2.44
LIMD2-203ENST00000578067 MRFAP1Q9Y605 127 aa30.29■■■□□ 2.44
LIMD2-203ENST00000578067 WDR81Q562E7 1941 aa30.28■■■□□ 2.44
LIMD2-203ENST00000578067 SYNGAP1Q96PV0 1343 aa30.28■■■□□ 2.44
LIMD2-203ENST00000578067 AKR1B10O60218 316 aa30.28■■■□□ 2.44
LIMD2-203ENST00000578067 SERPING1P05155 500 aa30.28■■■□□ 2.44
LIMD2-203ENST00000578067 VAV2P52735 878 aa30.28■■■□□ 2.44
LIMD2-203ENST00000578067 DMP1Q13316 513 aaPredicted RBP30.28■■■□□ 2.44
LIMD2-203ENST00000578067 Q3C1V9 767 aa30.28■■■□□ 2.44
LIMD2-203ENST00000578067 ANKRD7Q92527 254 aa30.28■■■□□ 2.44
LIMD2-203ENST00000578067 SLC10A4Q96EP9 437 aa30.28■■■□□ 2.44
LIMD2-203ENST00000578067 PDLIM7Q9NR12 457 aa30.28■■■□□ 2.44
LIMD2-203ENST00000578067 CYP26B1Q9NR63 512 aa30.28■■■□□ 2.44
LIMD2-203ENST00000578067 CLEC11AQ9Y240 323 aa30.28■■■□□ 2.44
LIMD2-203ENST00000578067 CTAGE9A4FU28 777 aa30.27■■■□□ 2.44
LIMD2-203ENST00000578067 TLR2O60603 784 aa30.27■■■□□ 2.44
LIMD2-203ENST00000578067 NPTX2P47972 431 aa30.27■■■□□ 2.44
LIMD2-203ENST00000578067 MCPH1Q8NEM0 835 aa30.27■■■□□ 2.44
LIMD2-203ENST00000578067 AIPL1Q9NZN9 384 aa30.27■■■□□ 2.44
LIMD2-203ENST00000578067 MAFBQ9Y5Q3 323 aaPredicted RBP30.27■■■□□ 2.44
LIMD2-203ENST00000578067 CCDC169A6NNP5 214 aa30.27■■■□□ 2.44
LIMD2-203ENST00000578067 UCHL3P15374 230 aa30.27■■■□□ 2.44
LIMD2-203ENST00000578067 UBA1P22314 1058 aaKnown RBP30.27■■■□□ 2.44
LIMD2-203ENST00000578067 RAPGEF1Q13905 1077 aa30.27■■■□□ 2.44
LIMD2-203ENST00000578067 ASTE1Q2TB18 679 aaPredicted RBP30.27■■■□□ 2.44
LIMD2-203ENST00000578067 TMEM161BQ8NDZ6 487 aa30.27■■■□□ 2.44
LIMD2-203ENST00000578067 SPIRE2Q8WWL2 714 aa30.27■■■□□ 2.44
LIMD2-203ENST00000578067 HVCN1Q96D96 273 aa30.27■■■□□ 2.44
LIMD2-203ENST00000578067 MPHOSPH6Q99547 160 aaKnown RBP30.27■■■□□ 2.44
LIMD2-203ENST00000578067 ZNF302Q9NR11 478 aa30.27■■■□□ 2.44
LIMD2-203ENST00000578067 GCNT4Q9P109 453 aa30.27■■■□□ 2.44
LIMD2-203ENST00000578067 FBXL5Q9UKA1 691 aa30.27■■■□□ 2.44
LIMD2-203ENST00000578067 TFR2Q9UP52 801 aa30.27■■■□□ 2.44
LIMD2-203ENST00000578067 RCCD1A6NED2 376 aa30.26■■■□□ 2.43
LIMD2-203ENST00000578067 TDRD12Q587J7 1177 aaKnown RBP30.26■■■□□ 2.43
LIMD2-203ENST00000578067 GPIHBP1Q8IV16 184 aa30.26■■■□□ 2.43
LIMD2-203ENST00000578067 NTPCRQ9BSD7 190 aaKnown RBP30.26■■■□□ 2.43
LIMD2-203ENST00000578067 LACRTQ9GZZ8 138 aa30.26■■■□□ 2.43
LIMD2-203ENST00000578067 EXOC7Q9UPT5 735 aa30.26■■■□□ 2.43
LIMD2-203ENST00000578067 FMO5P49326 533 aa30.25■■■□□ 2.43
LIMD2-203ENST00000578067 MNS1Q8NEH6 495 aa30.25■■■□□ 2.43
LIMD2-203ENST00000578067 TSGA10Q9BZW7 698 aa30.25■■■□□ 2.43
LIMD2-203ENST00000578067 KMT5AQ9NQR1 393 aa30.25■■■□□ 2.43
LIMD2-203ENST00000578067 TBX20Q9UMR3 447 aa30.25■■■□□ 2.43
LIMD2-203ENST00000578067 PCDHA13Q9Y5I0 950 aa30.25■■■□□ 2.43
LIMD2-203ENST00000578067 TISP43B9A030 160 aa30.25■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms