RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 MIS18BP1Q6P0N0 1132 aa18.04■□□□□ 0.48
VAPA-204ENST00000577901 PDXDC2PQ6P474 469 aa18.04■□□□□ 0.48
VAPA-204ENST00000577901 MOXD1Q6UVY6 613 aa18.04■□□□□ 0.48
VAPA-204ENST00000577901 CCDC60Q8IWA6 550 aaPredicted RBP18.04■□□□□ 0.48
VAPA-204ENST00000577901 SMRP1Q8NCR6 262 aa18.04■□□□□ 0.48
VAPA-204ENST00000577901 TMEM40Q8WWA1 233 aa18.04■□□□□ 0.48
VAPA-204ENST00000577901 MFSD14AQ96MC6 490 aa18.04■□□□□ 0.48
VAPA-204ENST00000577901 NAP1L4Q99733 375 aaKnown RBP18.04■□□□□ 0.48
VAPA-204ENST00000577901 TLE6Q9H808 572 aa18.04■□□□□ 0.48
VAPA-204ENST00000577901 ZNF302Q9NR11 478 aa18.04■□□□□ 0.48
VAPA-204ENST00000577901 AAASQ9NRG9 546 aa18.04■□□□□ 0.48
VAPA-204ENST00000577901 C1orf112Q9NSG2 853 aa18.04■□□□□ 0.48
VAPA-204ENST00000577901 ST3GAL5Q9UNP4 418 aa18.04■□□□□ 0.48
VAPA-204ENST00000577901 PCDHGC5Q9Y5F6 944 aa18.04■□□□□ 0.48
VAPA-204ENST00000577901 TBKBP1A7MCY6 615 aa18.03■□□□□ 0.48
VAPA-204ENST00000577901 ZBTB42B2RXF5 422 aa18.03■□□□□ 0.48
VAPA-204ENST00000577901 GPR182O15218 404 aa18.03■□□□□ 0.48
VAPA-204ENST00000577901 DHX15O43143 795 aaKnown RBP18.03■□□□□ 0.48
VAPA-204ENST00000577901 EDIL3O43854 480 aa18.03■□□□□ 0.48
VAPA-204ENST00000577901 GLP2RO95838 553 aa18.03■□□□□ 0.48
VAPA-204ENST00000577901 UBE3AQ05086 875 aa18.03■□□□□ 0.48
VAPA-204ENST00000577901 SAFBQ15424 915 aaKnown RBP eCLIP18.03■□□□□ 0.48
VAPA-204ENST00000577901 LETM2Q2VYF4 491 aa18.03■□□□□ 0.48
VAPA-204ENST00000577901 FAM102BQ5T8I3 360 aa18.03■□□□□ 0.48
VAPA-204ENST00000577901 SWSAP1Q6NVH7 229 aa18.03■□□□□ 0.48
VAPA-204ENST00000577901 PIK3AP1Q6ZUJ8 805 aa18.03■□□□□ 0.48
VAPA-204ENST00000577901 SLC24A5Q71RS6 500 aa18.03■□□□□ 0.48
VAPA-204ENST00000577901 NEK8Q86SG6 692 aa18.03■□□□□ 0.48
VAPA-204ENST00000577901 OXER1Q8TDS5 423 aa18.03■□□□□ 0.48
VAPA-204ENST00000577901 MICAL1Q8TDZ2 1067 aa18.03■□□□□ 0.48
VAPA-204ENST00000577901 EDAQ92838 391 aa18.03■□□□□ 0.48
VAPA-204ENST00000577901 LENG9Q96B70 501 aa18.03■□□□□ 0.48
VAPA-204ENST00000577901 C8orf76Q96K31 380 aa18.03■□□□□ 0.48
VAPA-204ENST00000577901 BARX2Q9UMQ3 279 aaPredicted RBP18.03■□□□□ 0.48
VAPA-204ENST00000577901 C9IYK1 514 aa18.02■□□□□ 0.48
VAPA-204ENST00000577901 MSH4O15457 936 aa18.02■□□□□ 0.48
VAPA-204ENST00000577901 ATP4AP20648 1035 aa18.02■□□□□ 0.48
VAPA-204ENST00000577901 FOSBP53539 338 aa18.02■□□□□ 0.48
VAPA-204ENST00000577901 CRYBB1P53674 252 aaPredicted RBP18.02■□□□□ 0.48
VAPA-204ENST00000577901 ZNF746Q6NUN9 644 aaPredicted RBP18.02■□□□□ 0.48
VAPA-204ENST00000577901 CKAP2LQ8IYA6 745 aa18.02■□□□□ 0.48
VAPA-204ENST00000577901 SMAP1Q8IYB5 467 aaPredicted RBP18.02■□□□□ 0.48
VAPA-204ENST00000577901 PPP1R16BQ96T49 567 aa18.02■□□□□ 0.48
VAPA-204ENST00000577901 RIT2Q99578 217 aa18.02■□□□□ 0.48
VAPA-204ENST00000577901 DDX25Q9UHL0 483 aaKnown RBP18.02■□□□□ 0.48
VAPA-204ENST00000577901 USP15Q9Y4E8 981 aaPredicted RBP18.02■□□□□ 0.48
VAPA-204ENST00000577901 LOXHD1Q8IVV2 1947 aa18.02■□□□□ 0.47
VAPA-204ENST00000577901 LOC730098B7Z3J9 87 aa18.01■□□□□ 0.47
VAPA-204ENST00000577901 PER2O15055 1255 aa18.01■□□□□ 0.47
VAPA-204ENST00000577901 GAS7O60861 476 aa18.01■□□□□ 0.47
VAPA-204ENST00000577901 FGF18O76093 207 aa18.01■□□□□ 0.47
VAPA-204ENST00000577901 TDP2O95551 362 aa18.01■□□□□ 0.47
VAPA-204ENST00000577901 C22orf31O95567 290 aa18.01■□□□□ 0.47
VAPA-204ENST00000577901 GCFC2P16383 781 aaKnown RBP18.01■□□□□ 0.47
VAPA-204ENST00000577901 MRE11P49959 708 aa18.01■□□□□ 0.47
VAPA-204ENST00000577901 NR5A1Q13285 461 aa18.01■□□□□ 0.47
VAPA-204ENST00000577901 KIZQ2M2Z5 673 aa18.01■□□□□ 0.47
VAPA-204ENST00000577901 PPP4R3AQ6IN85 833 aa18.01■□□□□ 0.47
VAPA-204ENST00000577901 DIS3L2Q8IYB7 885 aaKnown RBP18.01■□□□□ 0.47
VAPA-204ENST00000577901 SLC5A5Q92911 643 aa18.01■□□□□ 0.47
VAPA-204ENST00000577901 TMX3Q96JJ7 454 aa18.01■□□□□ 0.47
VAPA-204ENST00000577901 MBOAT7Q96N66 472 aa18.01■□□□□ 0.47
VAPA-204ENST00000577901 OSMRQ99650 979 aa18.01■□□□□ 0.47
VAPA-204ENST00000577901 TEKT3Q9BXF9 490 aa18.01■□□□□ 0.47
VAPA-204ENST00000577901 ATP6V0A4Q9HBG4 840 aa18.01■□□□□ 0.47
VAPA-204ENST00000577901 TLR9Q9NR96 1032 aa18.01■□□□□ 0.47
VAPA-204ENST00000577901 TYW1Q9NV66 732 aaKnown RBP18.01■□□□□ 0.47
VAPA-204ENST00000577901 HCSTQ9UBK5 93 aa18.01■□□□□ 0.47
VAPA-204ENST00000577901 SAMM50Q9Y512 469 aa18.01■□□□□ 0.47
VAPA-204ENST00000577901 PLXNA4Q9HCM2 1894 aa18.01■□□□□ 0.47
VAPA-204ENST00000577901 BTBD18B2RXH4 712 aa18■□□□□ 0.47
VAPA-204ENST00000577901 CCNT1O60563 726 aaKnown RBP18■□□□□ 0.47
VAPA-204ENST00000577901 VTNP04004 478 aa18■□□□□ 0.47
VAPA-204ENST00000577901 PSAPP07602 524 aa18■□□□□ 0.47
VAPA-204ENST00000577901 FGFR1P11362 822 aa18■□□□□ 0.47
VAPA-204ENST00000577901 FAM189BP81408 668 aa18■□□□□ 0.47
VAPA-204ENST00000577901 LRCH2Q5VUJ6 765 aa18■□□□□ 0.47
VAPA-204ENST00000577901 FAM228AQ86W67 206 aa18■□□□□ 0.47
VAPA-204ENST00000577901 THNSL1Q8IYQ7 743 aa18■□□□□ 0.47
VAPA-204ENST00000577901 METTL13Q8N6R0 699 aa18■□□□□ 0.47
VAPA-204ENST00000577901 COLGALT1Q8NBJ5 622 aa18■□□□□ 0.47
VAPA-204ENST00000577901 BBXQ8WY36 941 aaPredicted RBP18■□□□□ 0.47
VAPA-204ENST00000577901 TMEM161AQ9NX61 479 aa18■□□□□ 0.47
VAPA-204ENST00000577901 KIF3AQ9Y496 699 aa18■□□□□ 0.47
VAPA-204ENST00000577901 PCDHA10Q9Y5I2 948 aa18■□□□□ 0.47
VAPA-204ENST00000577901 MAFBQ9Y5Q3 323 aaPredicted RBP18■□□□□ 0.47
VAPA-204ENST00000577901 FSD2A1L4K1 749 aa17.99■□□□□ 0.47
VAPA-204ENST00000577901 WDR64B1ANS9 1081 aa17.99■□□□□ 0.47
VAPA-204ENST00000577901 MARCH6O60337 910 aa17.99■□□□□ 0.47
VAPA-204ENST00000577901 GPR32O75388 356 aa17.99■□□□□ 0.47
VAPA-204ENST00000577901 ERVFC1P60507 584 aa17.99■□□□□ 0.47
VAPA-204ENST00000577901 RBM10P98175 930 aaKnown RBP17.99■□□□□ 0.47
VAPA-204ENST00000577901 GUCY1B3Q02153 619 aa17.99■□□□□ 0.47
VAPA-204ENST00000577901 CBX2Q14781 532 aaPredicted RBP17.99■□□□□ 0.47
VAPA-204ENST00000577901 DUSP6Q16828 381 aa17.99■□□□□ 0.47
VAPA-204ENST00000577901 PDE12Q6L8Q7 609 aaKnown RBP17.99■□□□□ 0.47
VAPA-204ENST00000577901 TRIM67Q6ZTA4 783 aa17.99■□□□□ 0.47
VAPA-204ENST00000577901 TRMT1LQ7Z2T5 733 aaKnown RBP17.99■□□□□ 0.47
VAPA-204ENST00000577901 BMP8AQ7Z5Y6 402 aa17.99■□□□□ 0.47
VAPA-204ENST00000577901 VN1R2Q8NFZ6 395 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms