RNA–Protein interactions for RNA: ENST00000577315.5

MKS1-205, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-205ENST00000577315 FSD2A1L4K1 749 aa16.78■□□□□ 0.28
MKS1-205ENST00000577315 H3BQ06 376 aaPredicted RBP16.78■□□□□ 0.28
MKS1-205ENST00000577315 DARSP14868 501 aaKnown RBP16.78■□□□□ 0.28
MKS1-205ENST00000577315 IL9P15248 144 aa16.78■□□□□ 0.28
MKS1-205ENST00000577315 IBSPP21815 317 aaPredicted RBP16.78■□□□□ 0.28
MKS1-205ENST00000577315 HYAL1Q12794 435 aa16.78■□□□□ 0.28
MKS1-205ENST00000577315 PPP2R5CQ13362 524 aa16.78■□□□□ 0.28
MKS1-205ENST00000577315 MTERF2Q49AM1 385 aa16.78■□□□□ 0.28
MKS1-205ENST00000577315 GJD3Q8N144 294 aa16.78■□□□□ 0.28
MKS1-205ENST00000577315 POF1BQ8WVV4 589 aa16.78■□□□□ 0.28
MKS1-205ENST00000577315 NLRP7Q8WX94 980 aa16.78■□□□□ 0.28
MKS1-205ENST00000577315 RSPH1Q8WYR4 309 aa16.78■□□□□ 0.28
MKS1-205ENST00000577315 GJA10Q969M2 543 aa16.78■□□□□ 0.28
MKS1-205ENST00000577315 GCOM2Q9BZD3 368 aaPredicted RBP16.78■□□□□ 0.28
MKS1-205ENST00000577315 TMEM117Q9H0C3 514 aa16.78■□□□□ 0.28
MKS1-205ENST00000577315 DACT1Q9NYF0 836 aa16.78■□□□□ 0.28
MKS1-205ENST00000577315 ORC3Q9UBD5 711 aaPredicted RBP16.78■□□□□ 0.28
MKS1-205ENST00000577315 PRKAG3Q9UGI9 489 aa16.78■□□□□ 0.28
MKS1-205ENST00000577315 IGKV6-21A0A0C4DH24 114 aa16.77■□□□□ 0.28
MKS1-205ENST00000577315 MARCH6O60337 910 aa16.77■□□□□ 0.28
MKS1-205ENST00000577315 LAG3P18627 525 aa16.77■□□□□ 0.28
MKS1-205ENST00000577315 COL9A1P20849 921 aa16.77■□□□□ 0.28
MKS1-205ENST00000577315 GATMP50440 423 aa16.77■□□□□ 0.28
MKS1-205ENST00000577315 AK2P54819 239 aa16.77■□□□□ 0.28
MKS1-205ENST00000577315 CAMK1Q14012 370 aa16.77■□□□□ 0.28
MKS1-205ENST00000577315 FAM102BQ5T8I3 360 aa16.77■□□□□ 0.28
MKS1-205ENST00000577315 PDE12Q6L8Q7 609 aaKnown RBP16.77■□□□□ 0.28
MKS1-205ENST00000577315 ABI1Q8IZP0 508 aa16.77■□□□□ 0.28
MKS1-205ENST00000577315 KCNMB3Q9NPA1 279 aa16.77■□□□□ 0.28
MKS1-205ENST00000577315 CHST12Q9NRB3 414 aa16.77■□□□□ 0.28
MKS1-205ENST00000577315 ARID2Q68CP9 1835 aa16.76■□□□□ 0.27
MKS1-205ENST00000577315 DDX11L8A8MPP1 907 aa16.76■□□□□ 0.27
MKS1-205ENST00000577315 SLC37A4O43826 429 aa16.76■□□□□ 0.27
MKS1-205ENST00000577315 CCNT1O60563 726 aaKnown RBP16.76■□□□□ 0.27
MKS1-205ENST00000577315 MAFO75444 373 aaPredicted RBP16.76■□□□□ 0.27
MKS1-205ENST00000577315 STBD1O95210 358 aa16.76■□□□□ 0.27
MKS1-205ENST00000577315 BAG4O95429 457 aaKnown RBP16.76■□□□□ 0.27
MKS1-205ENST00000577315 EOMESO95936 686 aa16.76■□□□□ 0.27
MKS1-205ENST00000577315 P4HBP07237 508 aaKnown RBP16.76■□□□□ 0.27
MKS1-205ENST00000577315 LTBRP36941 435 aa16.76■□□□□ 0.27
MKS1-205ENST00000577315 QARSP47897 775 aaKnown RBP16.76■□□□□ 0.27
MKS1-205ENST00000577315 ADAM15Q13444 863 aa16.76■□□□□ 0.27
MKS1-205ENST00000577315 PIK3AP1Q6ZUJ8 805 aa16.76■□□□□ 0.27
MKS1-205ENST00000577315 ZNF410Q86VK4 478 aa16.76■□□□□ 0.27
MKS1-205ENST00000577315 CEP89Q96ST8 783 aa16.76■□□□□ 0.27
MKS1-205ENST00000577315 TYW1Q9NV66 732 aaKnown RBP16.76■□□□□ 0.27
MKS1-205ENST00000577315 A0A0U1RQF3 1178 aa16.75■□□□□ 0.27
MKS1-205ENST00000577315 CARNS1A5YM72 827 aa16.75■□□□□ 0.27
MKS1-205ENST00000577315 CTDNEP1O95476 244 aa16.75■□□□□ 0.27
MKS1-205ENST00000577315 SKIP12755 728 aa16.75■□□□□ 0.27
MKS1-205ENST00000577315 SFPQP23246 707 aaKnown RBP eCLIP16.75■□□□□ 0.27
MKS1-205ENST00000577315 SSTR3P32745 418 aaPredicted RBP16.75■□□□□ 0.27
MKS1-205ENST00000577315 KRT2P35908 639 aa16.75■□□□□ 0.27
MKS1-205ENST00000577315 ECHDC2Q86YB7 292 aa16.75■□□□□ 0.27
MKS1-205ENST00000577315 SLFN12Q8IYM2 578 aa16.75■□□□□ 0.27
MKS1-205ENST00000577315 THNSL1Q8IYQ7 743 aa16.75■□□□□ 0.27
MKS1-205ENST00000577315 LRRC43Q8N309 656 aa16.75■□□□□ 0.27
MKS1-205ENST00000577315 EFHBQ8N7U6 833 aa16.75■□□□□ 0.27
MKS1-205ENST00000577315 COLGALT1Q8NBJ5 622 aa16.75■□□□□ 0.27
MKS1-205ENST00000577315 IGFLR1Q9H665 355 aa16.75■□□□□ 0.27
MKS1-205ENST00000577315 EPHX3Q9H6B9 360 aa16.75■□□□□ 0.27
MKS1-205ENST00000577315 TLR9Q9NR96 1032 aa16.75■□□□□ 0.27
MKS1-205ENST00000577315 PUF60Q9UHX1 559 aaKnown RBP16.75■□□□□ 0.27
MKS1-205ENST00000577315 VAV3Q9UKW4 847 aa16.75■□□□□ 0.27
MKS1-205ENST00000577315 LZTS1Q9Y250 596 aa16.75■□□□□ 0.27
MKS1-205ENST00000577315 PI4K2BG5E9Z4 385 aa16.74■□□□□ 0.27
MKS1-205ENST00000577315 FGF18O76093 207 aa16.74■□□□□ 0.27
MKS1-205ENST00000577315 FGFR1P11362 822 aa16.74■□□□□ 0.27
MKS1-205ENST00000577315 ALADP13716 330 aa16.74■□□□□ 0.27
MKS1-205ENST00000577315 DNAJB1P25685 340 aa16.74■□□□□ 0.27
MKS1-205ENST00000577315 PPM1AP35813 382 aa16.74■□□□□ 0.27
MKS1-205ENST00000577315 NDUFV1P49821 464 aa16.74■□□□□ 0.27
MKS1-205ENST00000577315 PLCB3Q01970 1234 aa16.74■□□□□ 0.27
MKS1-205ENST00000577315 SMAD4Q13485 552 aaKnown RBP16.74■□□□□ 0.27
MKS1-205ENST00000577315 EPHA7Q15375 998 aa16.74■□□□□ 0.27
MKS1-205ENST00000577315 OTUD6AQ7L8S5 288 aa16.74■□□□□ 0.27
MKS1-205ENST00000577315 C4orf19Q8IY42 314 aa16.74■□□□□ 0.27
MKS1-205ENST00000577315 MICAL1Q8TDZ2 1067 aa16.74■□□□□ 0.27
MKS1-205ENST00000577315 SLC7A3Q8WY07 619 aa16.74■□□□□ 0.27
MKS1-205ENST00000577315 GTF3C6Q969F1 213 aa16.74■□□□□ 0.27
MKS1-205ENST00000577315 CASD1Q96PB1 797 aa16.74■□□□□ 0.27
MKS1-205ENST00000577315 POP1Q99575 1024 aaKnown RBP16.74■□□□□ 0.27
MKS1-205ENST00000577315 CDCA3Q99618 268 aaPredicted RBP16.74■□□□□ 0.27
MKS1-205ENST00000577315 MRPL9Q9BYD2 267 aaKnown RBP16.74■□□□□ 0.27
MKS1-205ENST00000577315 CWH43Q9H720 699 aa16.74■□□□□ 0.27
MKS1-205ENST00000577315 CYP26B1Q9NR63 512 aa16.74■□□□□ 0.27
MKS1-205ENST00000577315 SUCLA2Q9P2R7 463 aaPredicted RBP16.74■□□□□ 0.27
MKS1-205ENST00000577315 CD207Q9UJ71 328 aa16.74■□□□□ 0.27
MKS1-205ENST00000577315 EML1O00423 815 aa16.73■□□□□ 0.27
MKS1-205ENST00000577315 MBTPS2O43462 519 aa16.73■□□□□ 0.27
MKS1-205ENST00000577315 GAS2O43903 313 aaKnown RBP16.73■□□□□ 0.27
MKS1-205ENST00000577315 GPR37L1O60883 481 aa16.73■□□□□ 0.27
MKS1-205ENST00000577315 CSPG5O95196 566 aa16.73■□□□□ 0.27
MKS1-205ENST00000577315 IRS1P35568 1242 aa16.73■□□□□ 0.27
MKS1-205ENST00000577315 RFC5P40937 340 aa16.73■□□□□ 0.27
MKS1-205ENST00000577315 TRIM29Q14134 588 aa16.73■□□□□ 0.27
MKS1-205ENST00000577315 SMAD2Q15796 467 aaKnown RBP16.73■□□□□ 0.27
MKS1-205ENST00000577315 ME3Q16798 604 aa16.73■□□□□ 0.27
MKS1-205ENST00000577315 TMEM31Q5JXX7 168 aa16.73■□□□□ 0.27
MKS1-205ENST00000577315 ANO5Q75V66 913 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms