RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 H7C0C1 242 aa19.23■□□□□ 0.67
ATPAF1-214ENST00000576409 MAP2K7O14733 419 aa19.23■□□□□ 0.67
ATPAF1-214ENST00000576409 MYBP10242 640 aa19.23■□□□□ 0.67
ATPAF1-214ENST00000576409 ATP5OP48047 213 aa19.23■□□□□ 0.67
ATPAF1-214ENST00000576409 SLC30A10Q6XR72 485 aa19.23■□□□□ 0.67
ATPAF1-214ENST00000576409 PPP4R3CPQ6ZMV5 832 aa19.23■□□□□ 0.67
ATPAF1-214ENST00000576409 ZNF34Q8IZ26 560 aa19.23■□□□□ 0.67
ATPAF1-214ENST00000576409 USP38Q8NB14 1042 aa19.23■□□□□ 0.67
ATPAF1-214ENST00000576409 CEP170P1Q96L14 293 aa19.23■□□□□ 0.67
ATPAF1-214ENST00000576409 RCCD1A6NED2 376 aa19.23■□□□□ 0.67
ATPAF1-214ENST00000576409 GNPTABQ3T906 1256 aa19.23■□□□□ 0.67
ATPAF1-214ENST00000576409 SPDL1Q96EA4 605 aa19.23■□□□□ 0.67
ATPAF1-214ENST00000576409 C11orf70Q9BRQ4 267 aa19.23■□□□□ 0.67
ATPAF1-214ENST00000576409 TRIM6Q9C030 488 aaPredicted RBP19.23■□□□□ 0.67
ATPAF1-214ENST00000576409 EVX2Q03828 476 aa19.23■□□□□ 0.67
ATPAF1-214ENST00000576409 SYDE2Q5VT97 1194 aa19.23■□□□□ 0.67
ATPAF1-214ENST00000576409 TSEN2Q8NCE0 465 aaKnown RBP19.23■□□□□ 0.67
ATPAF1-214ENST00000576409 NXF1Q9UBU9 619 aaKnown RBP19.23■□□□□ 0.67
ATPAF1-214ENST00000576409 DIAPH2O60879 1101 aa19.22■□□□□ 0.67
ATPAF1-214ENST00000576409 INHBAP08476 426 aa19.22■□□□□ 0.67
ATPAF1-214ENST00000576409 GPC5P78333 572 aa19.22■□□□□ 0.67
ATPAF1-214ENST00000576409 NAALADL2Q58DX5 795 aa19.22■□□□□ 0.67
ATPAF1-214ENST00000576409 RHOT2Q8IXI1 618 aa19.22■□□□□ 0.67
ATPAF1-214ENST00000576409 ABCA9Q8IUA7 1624 aa19.22■□□□□ 0.67
ATPAF1-214ENST00000576409 SLC29A2Q14542 456 aa19.22■□□□□ 0.67
ATPAF1-214ENST00000576409 LMBRD2Q68DH5 695 aaPredicted RBP19.22■□□□□ 0.67
ATPAF1-214ENST00000576409 CEP128Q6ZU80 1094 aa19.22■□□□□ 0.67
ATPAF1-214ENST00000576409 TXNRD3Q86VQ6 643 aa19.22■□□□□ 0.67
ATPAF1-214ENST00000576409 KMT5AQ9NQR1 393 aa19.22■□□□□ 0.67
ATPAF1-214ENST00000576409 SLC16A4O15374 487 aa19.22■□□□□ 0.67
ATPAF1-214ENST00000576409 KRT1P04264 644 aa19.22■□□□□ 0.67
ATPAF1-214ENST00000576409 GRAPQ13588 217 aa19.22■□□□□ 0.67
ATPAF1-214ENST00000576409 NFIXQ14938 502 aa19.22■□□□□ 0.67
ATPAF1-214ENST00000576409 MAP7D1Q3KQU3 841 aa19.22■□□□□ 0.67
ATPAF1-214ENST00000576409 BRDTQ58F21 947 aaPredicted RBP19.22■□□□□ 0.67
ATPAF1-214ENST00000576409 SYCP2LQ5T4T6 812 aa19.22■□□□□ 0.67
ATPAF1-214ENST00000576409 RNF207Q6ZRF8 634 aa19.22■□□□□ 0.67
ATPAF1-214ENST00000576409 GRAPLQ8TC17 118 aaPredicted RBP19.22■□□□□ 0.67
ATPAF1-214ENST00000576409 ACCSQ96QU6 501 aa19.22■□□□□ 0.67
ATPAF1-214ENST00000576409 SLC40A1Q9NP59 571 aa19.22■□□□□ 0.67
ATPAF1-214ENST00000576409 SYNJ2BP-COX16A0A087WUM0 186 aa19.22■□□□□ 0.67
ATPAF1-214ENST00000576409 GRID2IPA4D2P6 1211 aa19.22■□□□□ 0.67
ATPAF1-214ENST00000576409 PODXLO00592 558 aa19.22■□□□□ 0.67
ATPAF1-214ENST00000576409 RASA1P20936 1047 aa19.22■□□□□ 0.67
ATPAF1-214ENST00000576409 PHLDB3Q6NSJ2 640 aa19.22■□□□□ 0.67
ATPAF1-214ENST00000576409 RFFLQ8WZ73 363 aa19.22■□□□□ 0.67
ATPAF1-214ENST00000576409 TTC17Q96AE7 1141 aa19.22■□□□□ 0.67
ATPAF1-214ENST00000576409 NUP85Q9BW27 656 aa19.22■□□□□ 0.67
ATPAF1-214ENST00000576409 SPATS2LQ9NUQ6 558 aaKnown RBP19.22■□□□□ 0.67
ATPAF1-214ENST00000576409 COX16Q9P0S2 106 aa19.22■□□□□ 0.67
ATPAF1-214ENST00000576409 TRIM37O94972 964 aa19.21■□□□□ 0.67
ATPAF1-214ENST00000576409 GEN1Q17RS7 908 aa19.21■□□□□ 0.67
ATPAF1-214ENST00000576409 EPC2Q52LR7 807 aa19.21■□□□□ 0.67
ATPAF1-214ENST00000576409 TGS1Q96RS0 853 aaKnown RBP19.21■□□□□ 0.67
ATPAF1-214ENST00000576409 REEP2Q9BRK0 252 aa19.21■□□□□ 0.67
ATPAF1-214ENST00000576409 ECT2Q9H8V3 914 aa19.21■□□□□ 0.67
ATPAF1-214ENST00000576409 GINM1Q9NU53 330 aa19.21■□□□□ 0.67
ATPAF1-214ENST00000576409 KLHL11Q9NVR0 708 aa19.21■□□□□ 0.67
ATPAF1-214ENST00000576409 EMSYQ7Z589 1322 aa19.21■□□□□ 0.67
ATPAF1-214ENST00000576409 GOLGA8RI6L899 631 aa19.21■□□□□ 0.67
ATPAF1-214ENST00000576409 FAM107AO95990 144 aa19.21■□□□□ 0.67
ATPAF1-214ENST00000576409 NAB2Q15742 525 aa19.21■□□□□ 0.67
ATPAF1-214ENST00000576409 FGFR1OP2Q9NVK5 253 aa19.21■□□□□ 0.67
ATPAF1-214ENST00000576409 PLS3P13797 630 aa19.21■□□□□ 0.67
ATPAF1-214ENST00000576409 HSPA6P17066 643 aa19.21■□□□□ 0.67
ATPAF1-214ENST00000576409 PHBP35232 272 aa19.21■□□□□ 0.67
ATPAF1-214ENST00000576409 LGSNQ5TDP6 509 aa19.21■□□□□ 0.67
ATPAF1-214ENST00000576409 SCARA5Q6ZMJ2 495 aa19.21■□□□□ 0.67
ATPAF1-214ENST00000576409 ZNF564Q8TBZ8 553 aaPredicted RBP19.21■□□□□ 0.67
ATPAF1-214ENST00000576409 ZNF512BQ96KM6 892 aaPredicted RBP19.21■□□□□ 0.67
ATPAF1-214ENST00000576409 KBTBD4Q9NVX7 518 aa19.21■□□□□ 0.67
ATPAF1-214ENST00000576409 SEPT9Q9UHD8 586 aaPredicted RBP19.21■□□□□ 0.67
ATPAF1-214ENST00000576409 CYP26A1O43174 497 aa19.2■□□□□ 0.66
ATPAF1-214ENST00000576409 ITGA4P13612 1032 aa19.2■□□□□ 0.66
ATPAF1-214ENST00000576409 SERPINB6P35237 376 aa19.2■□□□□ 0.66
ATPAF1-214ENST00000576409 KIAA1755Q5JYT7 1200 aa19.2■□□□□ 0.66
ATPAF1-214ENST00000576409 AP1ARQ63HQ0 302 aa19.2■□□□□ 0.66
ATPAF1-214ENST00000576409 JDP2Q8WYK2 163 aa19.2■□□□□ 0.66
ATPAF1-214ENST00000576409 MAML1Q92585 1016 aa19.2■□□□□ 0.66
ATPAF1-214ENST00000576409 MXD3Q9BW11 206 aa19.2■□□□□ 0.66
ATPAF1-214ENST00000576409 LMTK3Q96Q04 1460 aa19.2■□□□□ 0.66
ATPAF1-214ENST00000576409 ZNF335Q9H4Z2 1342 aaPredicted RBP19.2■□□□□ 0.66
ATPAF1-214ENST00000576409 F5H6K3 240 aa19.2■□□□□ 0.66
ATPAF1-214ENST00000576409 KLRC3Q07444 240 aa19.2■□□□□ 0.66
ATPAF1-214ENST00000576409 XPO6Q96QU8 1125 aaKnown RBP19.2■□□□□ 0.66
ATPAF1-214ENST00000576409 INTS2Q9H0H0 1204 aaKnown RBP19.2■□□□□ 0.66
ATPAF1-214ENST00000576409 NOP56O00567 594 aaKnown RBP19.2■□□□□ 0.66
ATPAF1-214ENST00000576409 TMEM139Q8IV31 216 aa19.2■□□□□ 0.66
ATPAF1-214ENST00000576409 RIOK1Q9BRS2 568 aaKnown RBP19.2■□□□□ 0.66
ATPAF1-214ENST00000576409 ENO4A6NNW6 628 aa19.19■□□□□ 0.66
ATPAF1-214ENST00000576409 PI4K2BG5E9Z4 385 aa19.19■□□□□ 0.66
ATPAF1-214ENST00000576409 STAT2P52630 851 aa19.19■□□□□ 0.66
ATPAF1-214ENST00000576409 KYNUQ16719 465 aa19.19■□□□□ 0.66
ATPAF1-214ENST00000576409 CLEC4GQ6UXB4 293 aa19.19■□□□□ 0.66
ATPAF1-214ENST00000576409 EPM2AIP1Q7L775 607 aaPredicted RBP19.19■□□□□ 0.66
ATPAF1-214ENST00000576409 GLIS3Q8NEA6 775 aa19.19■□□□□ 0.66
ATPAF1-214ENST00000576409 SLITRK6Q9H5Y7 841 aa19.19■□□□□ 0.66
ATPAF1-214ENST00000576409 TDRD3Q9H7E2 651 aaKnown RBP19.19■□□□□ 0.66
ATPAF1-214ENST00000576409 SYNGAP1Q96PV0 1343 aa19.19■□□□□ 0.66
ATPAF1-214ENST00000576409 CLDN3O15551 220 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms