RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 EVPLQ92817 2033 aa26.21■■□□□ 1.79
SNF8-217ENST00000576353 DENND3A2RUS2 1198 aa26.21■■□□□ 1.79
SNF8-217ENST00000576353 VPS37CA5D8V6 355 aaPredicted RBP26.21■■□□□ 1.79
SNF8-217ENST00000576353 FOSL2P15408 326 aa26.21■■□□□ 1.79
SNF8-217ENST00000576353 EMC2Q15006 297 aa26.21■■□□□ 1.79
SNF8-217ENST00000576353 DTHD1Q6ZMT9 781 aa26.21■■□□□ 1.79
SNF8-217ENST00000576353 HSCBQ8IWL3 235 aa26.21■■□□□ 1.79
SNF8-217ENST00000576353 PSPC1Q8WXF1 523 aaKnown RBP26.21■■□□□ 1.79
SNF8-217ENST00000576353 LINC01599Q8WXQ3 324 aa26.21■■□□□ 1.79
SNF8-217ENST00000576353 ZNF668Q96K58 619 aaPredicted RBP26.21■■□□□ 1.79
SNF8-217ENST00000576353 RNF216Q9NWF9 866 aaPredicted RBP26.21■■□□□ 1.79
SNF8-217ENST00000576353 SIP14410 1827 aa26.21■■□□□ 1.79
SNF8-217ENST00000576353 MED24O75448 989 aa26.2■■□□□ 1.78
SNF8-217ENST00000576353 DGAT1O75907 488 aa26.2■■□□□ 1.78
SNF8-217ENST00000576353 STAG3L1P0CL83 205 aa26.2■■□□□ 1.78
SNF8-217ENST00000576353 MUTP22033 750 aa26.2■■□□□ 1.78
SNF8-217ENST00000576353 SP7Q8TDD2 431 aaPredicted RBP26.2■■□□□ 1.78
SNF8-217ENST00000576353 PIGOQ8TEQ8 1089 aa26.2■■□□□ 1.78
SNF8-217ENST00000576353 ADAM2Q99965 735 aa26.2■■□□□ 1.78
SNF8-217ENST00000576353 INO80BQ9C086 356 aaPredicted RBP26.2■■□□□ 1.78
SNF8-217ENST00000576353 C1orf112Q9NSG2 853 aa26.2■■□□□ 1.78
SNF8-217ENST00000576353 MICAL3Q7RTP6 2002 aa26.2■■□□□ 1.78
SNF8-217ENST00000576353 A0A087WZ62 844 aa26.19■■□□□ 1.78
SNF8-217ENST00000576353 ASAP2O43150 1006 aa26.19■■□□□ 1.78
SNF8-217ENST00000576353 ARHGEF15O94989 841 aa26.19■■□□□ 1.78
SNF8-217ENST00000576353 SYT1P21579 422 aa26.19■■□□□ 1.78
SNF8-217ENST00000576353 RARRES1P49788 294 aa26.19■■□□□ 1.78
SNF8-217ENST00000576353 ATP2C1P98194 919 aaPredicted RBP26.19■■□□□ 1.78
SNF8-217ENST00000576353 NPAS4Q8IUM7 802 aa26.19■■□□□ 1.78
SNF8-217ENST00000576353 IGSF22Q8N9C0 903 aa26.19■■□□□ 1.78
SNF8-217ENST00000576353 PRPF31Q8WWY3 499 aaKnown RBP26.19■■□□□ 1.78
SNF8-217ENST00000576353 TMEM143Q96AN5 459 aa26.19■■□□□ 1.78
SNF8-217ENST00000576353 TGS1Q96RS0 853 aaKnown RBP26.19■■□□□ 1.78
SNF8-217ENST00000576353 MTRQ99707 1265 aa26.19■■□□□ 1.78
SNF8-217ENST00000576353 FDXACB1Q9BRP7 624 aaPredicted RBP26.19■■□□□ 1.78
SNF8-217ENST00000576353 RGS18Q9NS28 235 aa26.19■■□□□ 1.78
SNF8-217ENST00000576353 DBR1Q9UK59 544 aaKnown RBP26.19■■□□□ 1.78
SNF8-217ENST00000576353 COL4A3BPQ9Y5P4 624 aa26.19■■□□□ 1.78
SNF8-217ENST00000576353 LINC01553A4QN01 128 aa26.18■■□□□ 1.78
SNF8-217ENST00000576353 ZSCAN20P17040 1043 aaPredicted RBP26.18■■□□□ 1.78
SNF8-217ENST00000576353 CCT6AP40227 531 aaKnown RBP26.18■■□□□ 1.78
SNF8-217ENST00000576353 SLC24A5Q71RS6 500 aa26.18■■□□□ 1.78
SNF8-217ENST00000576353 ARNTL2Q8WYA1 636 aa26.18■■□□□ 1.78
SNF8-217ENST00000576353 NLRP4Q96MN2 994 aa26.18■■□□□ 1.78
SNF8-217ENST00000576353 CERS4Q9HA82 394 aa26.18■■□□□ 1.78
SNF8-217ENST00000576353 ATP6V0A4Q9HBG4 840 aa26.18■■□□□ 1.78
SNF8-217ENST00000576353 BMP2KQ9NSY1 1161 aaPredicted RBP26.18■■□□□ 1.78
SNF8-217ENST00000576353 FOXD4L1Q9NU39 408 aa26.18■■□□□ 1.78
SNF8-217ENST00000576353 LRFN2Q9ULH4 789 aa26.18■■□□□ 1.78
SNF8-217ENST00000576353 GBF1Q92538 1859 aa26.17■■□□□ 1.78
SNF8-217ENST00000576353 BMP15O95972 392 aa26.17■■□□□ 1.78
SNF8-217ENST00000576353 SARSP49591 514 aaKnown RBP26.17■■□□□ 1.78
SNF8-217ENST00000576353 LAMTOR4Q0VGL1 99 aa26.17■■□□□ 1.78
SNF8-217ENST00000576353 ARL6IP4Q66PJ3 421 aaKnown RBP26.17■■□□□ 1.78
SNF8-217ENST00000576353 KSR1Q8IVT5 923 aa26.17■■□□□ 1.78
SNF8-217ENST00000576353 A0A087WWV3 80 aa26.16■■□□□ 1.78
SNF8-217ENST00000576353 MGEA5O60502 916 aa26.16■■□□□ 1.78
SNF8-217ENST00000576353 DGKIO75912 1065 aa26.16■■□□□ 1.78
SNF8-217ENST00000576353 SFPQP23246 707 aaKnown RBP eCLIP26.16■■□□□ 1.78
SNF8-217ENST00000576353 ERVK-21P61565 698 aa26.16■■□□□ 1.78
SNF8-217ENST00000576353 DSC3Q14574 896 aa26.16■■□□□ 1.78
SNF8-217ENST00000576353 MXD4Q14582 209 aaPredicted RBP26.16■■□□□ 1.78
SNF8-217ENST00000576353 KRT79Q5XKE5 535 aa26.16■■□□□ 1.78
SNF8-217ENST00000576353 POTEGQ6S5H5 508 aa26.16■■□□□ 1.78
SNF8-217ENST00000576353 FERMT3Q86UX7 667 aa26.16■■□□□ 1.78
SNF8-217ENST00000576353 CRIPAKQ8N1N5 446 aa26.16■■□□□ 1.78
SNF8-217ENST00000576353 XPNPEP1Q9NQW7 623 aa26.16■■□□□ 1.78
SNF8-217ENST00000576353 PCDHB7Q9Y5E2 793 aa26.16■■□□□ 1.78
SNF8-217ENST00000576353 PTPRSQ13332 1948 aa26.16■■□□□ 1.78
SNF8-217ENST00000576353 SRGAP2CP0DJJ0 459 aa26.15■■□□□ 1.78
SNF8-217ENST00000576353 IL17AQ16552 155 aa26.15■■□□□ 1.78
SNF8-217ENST00000576353 SNX29Q8TEQ0 813 aa26.15■■□□□ 1.78
SNF8-217ENST00000576353 SAMD11Q96NU1 681 aa26.15■■□□□ 1.78
SNF8-217ENST00000576353 CHST12Q9NRB3 414 aa26.15■■□□□ 1.78
SNF8-217ENST00000576353 C9IYK1 514 aa26.14■■□□□ 1.78
SNF8-217ENST00000576353 HSP90AA1P07900 732 aaKnown RBP26.14■■□□□ 1.78
SNF8-217ENST00000576353 FAM189BP81408 668 aa26.14■■□□□ 1.78
SNF8-217ENST00000576353 SRGAP1Q7Z6B7 1085 aa26.14■■□□□ 1.78
SNF8-217ENST00000576353 FIBCD1Q8N539 461 aa26.14■■□□□ 1.78
SNF8-217ENST00000576353 MAFAQ8NHW3 353 aaPredicted RBP26.14■■□□□ 1.78
SNF8-217ENST00000576353 ZNF689Q96CS4 500 aaPredicted RBP26.14■■□□□ 1.78
SNF8-217ENST00000576353 IFT122Q9HBG6 1241 aa26.14■■□□□ 1.78
SNF8-217ENST00000576353 CHD9Q3L8U1 2897 aa26.13■■□□□ 1.77
SNF8-217ENST00000576353 ARHGEF35A5YM69 484 aa26.13■■□□□ 1.77
SNF8-217ENST00000576353 USO1O60763 962 aaKnown RBP26.13■■□□□ 1.77
SNF8-217ENST00000576353 CSDE1O75534 798 aaKnown RBP26.13■■□□□ 1.77
SNF8-217ENST00000576353 FGFR4P22455 802 aa26.13■■□□□ 1.77
SNF8-217ENST00000576353 IGFBP4P22692 258 aa26.13■■□□□ 1.77
SNF8-217ENST00000576353 TFDP1Q14186 410 aa26.13■■□□□ 1.77
SNF8-217ENST00000576353 ADGRE1Q14246 886 aa26.13■■□□□ 1.77
SNF8-217ENST00000576353 MCPH1Q8NEM0 835 aa26.13■■□□□ 1.77
SNF8-217ENST00000576353 DACT1Q9NYF0 836 aa26.13■■□□□ 1.77
SNF8-217ENST00000576353 MTUS1Q9ULD2 1270 aa26.13■■□□□ 1.77
SNF8-217ENST00000576353 KIAA1024Q9UPX6 916 aa26.13■■□□□ 1.77
SNF8-217ENST00000576353 ADGRA3Q8IWK6 1321 aa26.13■■□□□ 1.77
SNF8-217ENST00000576353 STX6O43752 255 aa26.12■■□□□ 1.77
SNF8-217ENST00000576353 BTG3Q14201 252 aaPredicted RBP26.12■■□□□ 1.77
SNF8-217ENST00000576353 CATSPER4Q7RTX7 472 aa26.12■■□□□ 1.77
SNF8-217ENST00000576353 SPRED2Q7Z698 418 aa26.12■■□□□ 1.77
SNF8-217ENST00000576353 RNF149Q8NC42 400 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms