RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 TCHHQ07283 1943 aa18.09■□□□□ 0.49
PFN1-203ENST00000574872 A0A087X0B3 334 aa18.08■□□□□ 0.48
PFN1-203ENST00000574872 PLA2G4BP0C869 781 aa18.08■□□□□ 0.48
PFN1-203ENST00000574872 RFC2P35250 354 aa18.08■□□□□ 0.48
PFN1-203ENST00000574872 FAM102BQ5T8I3 360 aa18.08■□□□□ 0.48
PFN1-203ENST00000574872 RRAGBQ5VZM2 374 aa18.08■□□□□ 0.48
PFN1-203ENST00000574872 C16orf59Q7L2K0 433 aa18.08■□□□□ 0.48
PFN1-203ENST00000574872 PDILTQ8N807 584 aa18.08■□□□□ 0.48
PFN1-203ENST00000574872 NLRP7Q8WX94 980 aa18.08■□□□□ 0.48
PFN1-203ENST00000574872 PSPC1Q8WXF1 523 aaKnown RBP18.08■□□□□ 0.48
PFN1-203ENST00000574872 NLRP4Q96MN2 994 aa18.08■□□□□ 0.48
PFN1-203ENST00000574872 POLR3FQ9H1D9 316 aaPredicted RBP18.08■□□□□ 0.48
PFN1-203ENST00000574872 POLD4Q9HCU8 107 aa18.08■□□□□ 0.48
PFN1-203ENST00000574872 BLOC1S4Q9NUP1 217 aa18.08■□□□□ 0.48
PFN1-203ENST00000574872 TET1Q8NFU7 2136 aa18.07■□□□□ 0.48
PFN1-203ENST00000574872 GPR32O75388 356 aa18.07■□□□□ 0.48
PFN1-203ENST00000574872 CYP11B2P19099 503 aa18.07■□□□□ 0.48
PFN1-203ENST00000574872 GPC3P51654 580 aa18.07■□□□□ 0.48
PFN1-203ENST00000574872 MCM6Q14566 821 aa18.07■□□□□ 0.48
PFN1-203ENST00000574872 LPIN1Q14693 890 aa18.07■□□□□ 0.48
PFN1-203ENST00000574872 FBXO47Q5MNV8 452 aa18.07■□□□□ 0.48
PFN1-203ENST00000574872 RPUSD2Q8IZ73 545 aaKnown RBP18.07■□□□□ 0.48
PFN1-203ENST00000574872 TCP11Q8WWU5 503 aa18.07■□□□□ 0.48
PFN1-203ENST00000574872 PRPF31Q8WWY3 499 aaKnown RBP18.07■□□□□ 0.48
PFN1-203ENST00000574872 RAD54LQ92698 747 aa18.07■□□□□ 0.48
PFN1-203ENST00000574872 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.07■□□□□ 0.484e-7■■□□□ 13.5
PFN1-203ENST00000574872 ADAMTS10Q9H324 1103 aa18.07■□□□□ 0.48
PFN1-203ENST00000574872 COL4A3BPQ9Y5P4 624 aa18.07■□□□□ 0.48
PFN1-203ENST00000574872 RANBP2P49792 3224 aaKnown RBP18.07■□□□□ 0.48
PFN1-203ENST00000574872 GAS2O43903 313 aaKnown RBP18.06■□□□□ 0.48
PFN1-203ENST00000574872 PARNO95453 639 aaKnown RBP18.06■□□□□ 0.48
PFN1-203ENST00000574872 CXCL10P02778 98 aa18.06■□□□□ 0.48
PFN1-203ENST00000574872 STAT6P42226 847 aa18.06■□□□□ 0.48
PFN1-203ENST00000574872 SLC12A3P55017 1021 aa18.06■□□□□ 0.48
PFN1-203ENST00000574872 RAD51AP2Q09MP3 1159 aa18.06■□□□□ 0.48
PFN1-203ENST00000574872 LAMTOR4Q0VGL1 99 aa18.06■□□□□ 0.48
PFN1-203ENST00000574872 TCTN1Q2MV58 587 aa18.06■□□□□ 0.48
PFN1-203ENST00000574872 C9orf50Q5SZB4 431 aa18.06■□□□□ 0.48
PFN1-203ENST00000574872 RESP18Q5W5W9 173 aa18.06■□□□□ 0.48
PFN1-203ENST00000574872 RINT1Q6NUQ1 792 aa18.06■□□□□ 0.48
PFN1-203ENST00000574872 ZNF365Q70YC5 407 aa18.06■□□□□ 0.48
PFN1-203ENST00000574872 OTOP2Q7RTS6 562 aa18.06■□□□□ 0.48
PFN1-203ENST00000574872 SYT2Q8N9I0 419 aaPredicted RBP18.06■□□□□ 0.48
PFN1-203ENST00000574872 MCPH1Q8NEM0 835 aa18.06■□□□□ 0.48
PFN1-203ENST00000574872 ASAP3Q8TDY4 903 aa18.06■□□□□ 0.48
PFN1-203ENST00000574872 TMEM40Q8WWA1 233 aa18.06■□□□□ 0.48
PFN1-203ENST00000574872 LARP4BQ92615 738 aaKnown RBP18.06■□□□□ 0.48
PFN1-203ENST00000574872 SIP14410 1827 aa18.06■□□□□ 0.48
PFN1-203ENST00000574872 A0A087WZ62 844 aa18.05■□□□□ 0.48
PFN1-203ENST00000574872 NPHP3-ACAD11A0A0J9YXS1 232 aa18.05■□□□□ 0.48
PFN1-203ENST00000574872 CSDE1O75534 798 aaKnown RBP18.05■□□□□ 0.48
PFN1-203ENST00000574872 SRGAP2CP0DJJ0 459 aa18.05■□□□□ 0.48
PFN1-203ENST00000574872 CD52P31358 61 aa18.05■□□□□ 0.48
PFN1-203ENST00000574872 ARL2P36404 184 aa18.05■□□□□ 0.48
PFN1-203ENST00000574872 CRYBB1P53674 252 aaPredicted RBP18.05■□□□□ 0.48
PFN1-203ENST00000574872 NAALADL2Q58DX5 795 aa18.05■□□□□ 0.48
PFN1-203ENST00000574872 TMEM240Q5SV17 173 aa18.05■□□□□ 0.48
PFN1-203ENST00000574872 PSRC1Q6PGN9 363 aaPredicted RBP18.05■□□□□ 0.48
PFN1-203ENST00000574872 CCDC73Q6ZRK6 1079 aa18.05■□□□□ 0.48
PFN1-203ENST00000574872 TSHZ1Q6ZSZ6 1077 aa18.05■□□□□ 0.48
PFN1-203ENST00000574872 GPBP1Q86WP2 473 aa18.05■□□□□ 0.48
PFN1-203ENST00000574872 KCTD17Q8N5Z5 321 aa18.05■□□□□ 0.48
PFN1-203ENST00000574872 DBF4BQ8NFT6 615 aa18.05■□□□□ 0.48
PFN1-203ENST00000574872 DHX58Q96C10 678 aa18.05■□□□□ 0.48
PFN1-203ENST00000574872 FDXACB1Q9BRP7 624 aaPredicted RBP18.05■□□□□ 0.48
PFN1-203ENST00000574872 AGO3Q9H9G7 860 aaKnown RBP18.05■□□□□ 0.48
PFN1-203ENST00000574872 FAM13BQ9NYF5 915 aa18.05■□□□□ 0.48
PFN1-203ENST00000574872 NOC2LQ9Y3T9 749 aaKnown RBP18.05■□□□□ 0.48
PFN1-203ENST00000574872 FGBP02675 491 aa18.04■□□□□ 0.48
PFN1-203ENST00000574872 PFKMP08237 780 aa18.04■□□□□ 0.48
PFN1-203ENST00000574872 GLRA2P23416 452 aa18.04■□□□□ 0.48
PFN1-203ENST00000574872 CACNB1Q02641 598 aaPredicted RBP18.04■□□□□ 0.48
PFN1-203ENST00000574872 SHHQ15465 462 aa18.04■□□□□ 0.48
PFN1-203ENST00000574872 PLEKHG4Q58EX7 1191 aa18.04■□□□□ 0.48
PFN1-203ENST00000574872 ADALQ6DHV7 355 aa18.04■□□□□ 0.48
PFN1-203ENST00000574872 C1orf186Q6ZWK4 172 aa18.04■□□□□ 0.48
PFN1-203ENST00000574872 RNF149Q8NC42 400 aa18.04■□□□□ 0.48
PFN1-203ENST00000574872 SEPT8Q92599 483 aa18.04■□□□□ 0.48
PFN1-203ENST00000574872 IFIH1Q9BYX4 1025 aaKnown RBP18.04■□□□□ 0.48
PFN1-203ENST00000574872 STK17AQ9UEE5 414 aa18.04■□□□□ 0.48
PFN1-203ENST00000574872 COLQQ9Y215 455 aaPredicted RBP18.04■□□□□ 0.48
PFN1-203ENST00000574872 LOXHD1Q8IVV2 1947 aa18.04■□□□□ 0.48
PFN1-203ENST00000574872 A0A1B0GVL5 298 aa18.03■□□□□ 0.48
PFN1-203ENST00000574872 ZBBXA8MT70 800 aa18.03■□□□□ 0.48
PFN1-203ENST00000574872 POLR2DO15514 142 aaKnown RBP18.03■□□□□ 0.48
PFN1-203ENST00000574872 HIP1RO75146 1068 aa18.03■□□□□ 0.48
PFN1-203ENST00000574872 RPS6KA5O75582 802 aa18.03■□□□□ 0.48
PFN1-203ENST00000574872 FGFR4P22455 802 aa18.03■□□□□ 0.48
PFN1-203ENST00000574872 BMP8BP34820 402 aa18.03■□□□□ 0.48
PFN1-203ENST00000574872 PAK2Q13177 524 aa18.03■□□□□ 0.48
PFN1-203ENST00000574872 CAPSQ13938 189 aa18.03■□□□□ 0.48
PFN1-203ENST00000574872 MXD4Q14582 209 aaPredicted RBP18.03■□□□□ 0.48
PFN1-203ENST00000574872 CNKSR3Q6P9H4 555 aa18.03■□□□□ 0.48
PFN1-203ENST00000574872 ZNF410Q86VK4 478 aa18.03■□□□□ 0.48
PFN1-203ENST00000574872 FAM228AQ86W67 206 aa18.03■□□□□ 0.48
PFN1-203ENST00000574872 BSNDQ8WZ55 320 aa18.03■□□□□ 0.48
PFN1-203ENST00000574872 RNPC3Q96LT9 517 aaKnown RBP18.03■□□□□ 0.48
PFN1-203ENST00000574872 GCOM2Q9BZD3 368 aaPredicted RBP18.03■□□□□ 0.48
PFN1-203ENST00000574872 PRO3102Q9H379 93 aa18.03■□□□□ 0.48
PFN1-203ENST00000574872 LRRIQ4A6NIV6 560 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms