RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 HIPK3Q9H422 1215 aa18.95■□□□□ 0.62
NUP88-210ENST00000574867 SUCLA2Q9P2R7 463 aaPredicted RBP18.95■□□□□ 0.62
NUP88-210ENST00000574867 M0QZ92 97 aa18.94■□□□□ 0.62
NUP88-210ENST00000574867 EVI5O60447 810 aa18.94■□□□□ 0.62
NUP88-210ENST00000574867 KINO60870 393 aaKnown RBP18.94■□□□□ 0.62
NUP88-210ENST00000574867 NR1I2O75469 434 aa18.94■□□□□ 0.62
NUP88-210ENST00000574867 MYL1P05976 194 aa18.94■□□□□ 0.62
NUP88-210ENST00000574867 MCM4P33991 863 aa18.94■□□□□ 0.62
NUP88-210ENST00000574867 DRP2Q13474 957 aa18.94■□□□□ 0.62
NUP88-210ENST00000574867 MXD4Q14582 209 aaPredicted RBP18.94■□□□□ 0.62
NUP88-210ENST00000574867 ARSHQ5FYA8 562 aa18.94■□□□□ 0.62
NUP88-210ENST00000574867 NOC4LQ9BVI4 516 aaKnown RBP18.94■□□□□ 0.62
NUP88-210ENST00000574867 POLR3FQ9H1D9 316 aaPredicted RBP18.94■□□□□ 0.62
NUP88-210ENST00000574867 KIAA0355O15063 1070 aa18.94■□□□□ 0.62
NUP88-210ENST00000574867 ASAP2O43150 1006 aa18.94■□□□□ 0.62
NUP88-210ENST00000574867 HIP1RO75146 1068 aa18.94■□□□□ 0.62
NUP88-210ENST00000574867 ARL2P36404 184 aa18.94■□□□□ 0.62
NUP88-210ENST00000574867 MRPS6P82932 125 aaKnown RBP18.94■□□□□ 0.62
NUP88-210ENST00000574867 DDX12PQ92771 950 aa18.94■□□□□ 0.62
NUP88-210ENST00000574867 REEP2Q9BRK0 252 aa18.94■□□□□ 0.62
NUP88-210ENST00000574867 PRDM5Q9NQX1 630 aaPredicted RBP18.94■□□□□ 0.62
NUP88-210ENST00000574867 PRKAG2Q9UGJ0 569 aa18.94■□□□□ 0.62
NUP88-210ENST00000574867 COL4A3BPQ9Y5P4 624 aa18.94■□□□□ 0.62
NUP88-210ENST00000574867 MYMKA6NI61 221 aa18.93■□□□□ 0.62
NUP88-210ENST00000574867 TBCAO75347 108 aaKnown RBP18.93■□□□□ 0.62
NUP88-210ENST00000574867 CKBP12277 381 aa18.93■□□□□ 0.62
NUP88-210ENST00000574867 CNNM4Q6P4Q7 775 aa18.93■□□□□ 0.62
NUP88-210ENST00000574867 MAEAQ7L5Y9 396 aa18.93■□□□□ 0.62
NUP88-210ENST00000574867 C7orf61Q8IZ16 206 aa18.93■□□□□ 0.62
NUP88-210ENST00000574867 PRPF31Q8WWY3 499 aaKnown RBP18.93■□□□□ 0.62
NUP88-210ENST00000574867 TRIM9Q9C026 710 aa18.93■□□□□ 0.62
NUP88-210ENST00000574867 C17orf75Q9HAS0 396 aa18.93■□□□□ 0.62
NUP88-210ENST00000574867 GPRC5CQ9NQ84 441 aa18.93■□□□□ 0.62
NUP88-210ENST00000574867 MYH11P35749 1972 aa18.93■□□□□ 0.62
NUP88-210ENST00000574867 VTNP04004 478 aa18.93■□□□□ 0.62
NUP88-210ENST00000574867 SELPP16109 830 aa18.93■□□□□ 0.62
NUP88-210ENST00000574867 PTMSP20962 102 aa18.93■□□□□ 0.62
NUP88-210ENST00000574867 MAPK7Q13164 816 aa18.93■□□□□ 0.62
NUP88-210ENST00000574867 ZNF410Q86VK4 478 aa18.93■□□□□ 0.62
NUP88-210ENST00000574867 RHPN2Q8IUC4 686 aa18.93■□□□□ 0.62
NUP88-210ENST00000574867 PAGE5Q96GU1 130 aa18.93■□□□□ 0.62
NUP88-210ENST00000574867 C7orf25Q9BPX7 421 aa18.93■□□□□ 0.62
NUP88-210ENST00000574867 HOOK1Q9UJC3 728 aaKnown RBP18.93■□□□□ 0.62
NUP88-210ENST00000574867 MKI67P46013 3256 aaKnown RBP18.92■□□□□ 0.62
NUP88-210ENST00000574867 RGS19P49795 217 aa18.92■□□□□ 0.62
NUP88-210ENST00000574867 RAD51AP2Q09MP3 1159 aa18.92■□□□□ 0.62
NUP88-210ENST00000574867 GIT2Q14161 759 aa18.92■□□□□ 0.62
NUP88-210ENST00000574867 TFDP1Q14186 410 aa18.92■□□□□ 0.62
NUP88-210ENST00000574867 PPP2R5AQ15172 486 aa18.92■□□□□ 0.62
NUP88-210ENST00000574867 FAM26DQ5JW98 314 aa18.92■□□□□ 0.62
NUP88-210ENST00000574867 SH3RF1Q7Z6J0 888 aa18.92■□□□□ 0.62
NUP88-210ENST00000574867 DAW1Q8N136 415 aa18.92■□□□□ 0.62
NUP88-210ENST00000574867 STAMQ92783 540 aa18.92■□□□□ 0.62
NUP88-210ENST00000574867 DPF3Q92784 378 aa18.92■□□□□ 0.62
NUP88-210ENST00000574867 DACT1Q9NYF0 836 aa18.92■□□□□ 0.62
NUP88-210ENST00000574867 TRPV2Q9Y5S1 764 aa18.92■□□□□ 0.62
NUP88-210ENST00000574867 SIP14410 1827 aa18.91■□□□□ 0.62
NUP88-210ENST00000574867 NPHP3-ACAD11A0A0J9YXS1 232 aa18.91■□□□□ 0.62
NUP88-210ENST00000574867 PARNO95453 639 aaKnown RBP18.91■□□□□ 0.62
NUP88-210ENST00000574867 MBD3O95983 291 aa18.91■□□□□ 0.62
NUP88-210ENST00000574867 AFMP43652 599 aa18.91■□□□□ 0.62
NUP88-210ENST00000574867 GPC3P51654 580 aa18.91■□□□□ 0.62
NUP88-210ENST00000574867 MGAT3Q09327 533 aa18.91■□□□□ 0.62
NUP88-210ENST00000574867 LAMTOR4Q0VGL1 99 aa18.91■□□□□ 0.62
NUP88-210ENST00000574867 ZNF618Q5T7W0 954 aa18.91■□□□□ 0.62
NUP88-210ENST00000574867 LRRC8DQ7L1W4 858 aa18.91■□□□□ 0.62
NUP88-210ENST00000574867 ELOA2Q8IYF1 753 aaPredicted RBP18.91■□□□□ 0.62
NUP88-210ENST00000574867 ASAP3Q8TDY4 903 aa18.91■□□□□ 0.62
NUP88-210ENST00000574867 IFT74Q96LB3 600 aa18.91■□□□□ 0.62
NUP88-210ENST00000574867 KCNG1Q9UIX4 513 aa18.91■□□□□ 0.62
NUP88-210ENST00000574867 TRIM43BA6NCK2 446 aa18.91■□□□□ 0.62
NUP88-210ENST00000574867 RSPH10B2B2RC85 870 aa18.91■□□□□ 0.62
NUP88-210ENST00000574867 GTPBP6O43824 516 aaPredicted RBP18.91■□□□□ 0.62
NUP88-210ENST00000574867 FAM13AO94988 1023 aa18.91■□□□□ 0.62
NUP88-210ENST00000574867 CTSHP09668 335 aa18.91■□□□□ 0.62
NUP88-210ENST00000574867 RSPH10BP0C881 870 aa18.91■□□□□ 0.62
NUP88-210ENST00000574867 GLRA2P23416 452 aa18.91■□□□□ 0.62
NUP88-210ENST00000574867 ZNF131P52739 623 aa18.91■□□□□ 0.62
NUP88-210ENST00000574867 NLRP11P59045 1033 aaKnown RBP18.91■□□□□ 0.62
NUP88-210ENST00000574867 TMEM62Q0P6H9 643 aa18.91■□□□□ 0.62
NUP88-210ENST00000574867 DYMQ7RTS9 669 aa18.91■□□□□ 0.62
NUP88-210ENST00000574867 TRIM43Q96BQ3 446 aaPredicted RBP18.91■□□□□ 0.62
NUP88-210ENST00000574867 DNAJC19Q96DA6 116 aa18.91■□□□□ 0.62
NUP88-210ENST00000574867 SCLT1Q96NL6 688 aa18.91■□□□□ 0.62
NUP88-210ENST00000574867 CELF4Q9BZC1 486 aaKnown RBP18.91■□□□□ 0.62
NUP88-210ENST00000574867 PPP1R12CQ9BZL4 782 aa18.91■□□□□ 0.62
NUP88-210ENST00000574867 PARVGQ9HBI0 331 aa18.91■□□□□ 0.62
NUP88-210ENST00000574867 LARSQ9P2J5 1176 aaKnown RBP18.91■□□□□ 0.62
NUP88-210ENST00000574867 CDY2AQ9Y6F7 541 aa18.91■□□□□ 0.62
NUP88-210ENST00000574867 GPR32O75388 356 aa18.9■□□□□ 0.62
NUP88-210ENST00000574867 TIMP1P01033 207 aa18.9■□□□□ 0.62
NUP88-210ENST00000574867 PLS3P13797 630 aa18.9■□□□□ 0.62
NUP88-210ENST00000574867 RAG1P15918 1043 aa18.9■□□□□ 0.62
NUP88-210ENST00000574867 NAMPTP43490 491 aa18.9■□□□□ 0.62
NUP88-210ENST00000574867 ASIC1P78348 528 aa18.9■□□□□ 0.62
NUP88-210ENST00000574867 CACNB1Q02641 598 aaPredicted RBP18.9■□□□□ 0.62
NUP88-210ENST00000574867 POU5F1BQ06416 359 aa18.9■□□□□ 0.62
NUP88-210ENST00000574867 DMP1Q13316 513 aaPredicted RBP18.9■□□□□ 0.62
NUP88-210ENST00000574867 GRAMD1CQ8IYS0 662 aa18.9■□□□□ 0.62
NUP88-210ENST00000574867 NLRP7Q8WX94 980 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms