RNA–Protein interactions for RNA: ENST00000574234.1

TRIM25-208, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-208ENST00000574234 PRPF38AQ8NAV1 312 aaKnown RBP6.13□□□□□ -1.43
TRIM25-208ENST00000574234 DTWD2Q8NBA8 298 aa6.13□□□□□ -1.43
TRIM25-208ENST00000574234 MORC4Q8TE76 937 aa6.13□□□□□ -1.43
TRIM25-208ENST00000574234 CPLX3Q8WVH0 158 aa6.13□□□□□ -1.43
TRIM25-208ENST00000574234 ANAPC16Q96DE5 110 aa6.13□□□□□ -1.43
TRIM25-208ENST00000574234 SHDQ96IW2 340 aa6.13□□□□□ -1.43
TRIM25-208ENST00000574234 SLF1Q9BQI6 1058 aa6.13□□□□□ -1.43
TRIM25-208ENST00000574234 RTP3Q9BQQ7 232 aa6.13□□□□□ -1.43
TRIM25-208ENST00000574234 PLVAPQ9BX97 442 aa6.13□□□□□ -1.43
TRIM25-208ENST00000574234 SRRTQ9BXP5 876 aaKnown RBP6.13□□□□□ -1.43
TRIM25-208ENST00000574234 CCDC113Q9H0I3 377 aa6.13□□□□□ -1.43
TRIM25-208ENST00000574234 TMX1Q9H3N1 280 aa6.13□□□□□ -1.43
TRIM25-208ENST00000574234 MFSD1Q9H3U5 465 aa6.13□□□□□ -1.43
TRIM25-208ENST00000574234 IGFLR1Q9H665 355 aa6.13□□□□□ -1.43
TRIM25-208ENST00000574234 LATS2Q9NRM7 1088 aa6.13□□□□□ -1.43
TRIM25-208ENST00000574234 SWAP70Q9UH65 585 aa6.13□□□□□ -1.43
TRIM25-208ENST00000574234 PPME1Q9Y570 386 aa6.13□□□□□ -1.43
TRIM25-208ENST00000574234 RAD50Q92878 1312 aa6.13□□□□□ -1.43
TRIM25-208ENST00000574234 ZFYVE26Q68DK2 2539 aa6.13□□□□□ -1.43
TRIM25-208ENST00000574234 LOC102724159A0A0B4J2E5 919 aa6.12□□□□□ -1.43
TRIM25-208ENST00000574234 TMEM238LA0A1B0GVL6 79 aa6.12□□□□□ -1.43
TRIM25-208ENST00000574234 CDC45O75419 566 aa6.12□□□□□ -1.43
TRIM25-208ENST00000574234 PF4P02776 101 aa6.12□□□□□ -1.43
TRIM25-208ENST00000574234 MYL3P08590 195 aa6.12□□□□□ -1.43
TRIM25-208ENST00000574234 TIMP2P16035 220 aa6.12□□□□□ -1.43
TRIM25-208ENST00000574234 EPB42P16452 691 aa6.12□□□□□ -1.43
TRIM25-208ENST00000574234 BMPR1AP36894 532 aa6.12□□□□□ -1.43
TRIM25-208ENST00000574234 WDR4P57081 412 aaKnown RBP6.12□□□□□ -1.43
TRIM25-208ENST00000574234 DYNLL1P63167 89 aaKnown RBP6.12□□□□□ -1.43
TRIM25-208ENST00000574234 CNTN2Q02246 1040 aa6.12□□□□□ -1.43
TRIM25-208ENST00000574234 LMNB2Q03252 620 aa6.12□□□□□ -1.43
TRIM25-208ENST00000574234 FAM160A1Q05DH4 1040 aa6.12□□□□□ -1.43
TRIM25-208ENST00000574234 TYRO3Q06418 890 aa6.12□□□□□ -1.43
TRIM25-208ENST00000574234 CAMK1Q14012 370 aa6.12□□□□□ -1.43
TRIM25-208ENST00000574234 PWP2Q15269 919 aaKnown RBP6.12□□□□□ -1.43
TRIM25-208ENST00000574234 FNDC1Q4ZHG4 1894 aaPredicted RBP6.12□□□□□ -1.43
TRIM25-208ENST00000574234 CCDC181Q5TID7 509 aa6.12□□□□□ -1.43
TRIM25-208ENST00000574234 TTC39BQ5VTQ0 682 aaPredicted RBP6.12□□□□□ -1.43
TRIM25-208ENST00000574234 SLITRK4Q8IW52 837 aa6.12□□□□□ -1.43
TRIM25-208ENST00000574234 FIBCD1Q8N539 461 aa6.12□□□□□ -1.43
TRIM25-208ENST00000574234 P2RX5Q93086 422 aa6.12□□□□□ -1.43
TRIM25-208ENST00000574234 OXCT2Q9BYC2 517 aaPredicted RBP6.12□□□□□ -1.43
TRIM25-208ENST00000574234 ABCB6Q9NP58 842 aa6.12□□□□□ -1.43
TRIM25-208ENST00000574234 PDGFCQ9NRA1 345 aa6.12□□□□□ -1.43
TRIM25-208ENST00000574234 FANCLQ9NW38 375 aa6.12□□□□□ -1.43
TRIM25-208ENST00000574234 UBP1Q9NZI7 540 aa6.12□□□□□ -1.43
TRIM25-208ENST00000574234 SALL4Q9UJQ4 1053 aa6.12□□□□□ -1.43
TRIM25-208ENST00000574234 NR2E1Q9Y466 385 aa6.12□□□□□ -1.43
TRIM25-208ENST00000574234 KAT6AQ92794 2004 aa6.11□□□□□ -1.43
TRIM25-208ENST00000574234 COL4A3Q01955 1670 aa6.11□□□□□ -1.43
TRIM25-208ENST00000574234 PTPRCP08575 1304 aa6.11□□□□□ -1.43
TRIM25-208ENST00000574234 FLNBO75369 2602 aaKnown RBP6.11□□□□□ -1.43
TRIM25-208ENST00000574234 SMAD7O15105 426 aaKnown RBP6.11□□□□□ -1.43
TRIM25-208ENST00000574234 NKRFO15226 690 aaKnown RBP eCLIP6.11□□□□□ -1.43
TRIM25-208ENST00000574234 CYP2E1P05181 493 aaPredicted RBP6.11□□□□□ -1.43
TRIM25-208ENST00000574234 EDN3P14138 238 aa6.11□□□□□ -1.43
TRIM25-208ENST00000574234 LIG3P49916 1009 aa6.11□□□□□ -1.43
TRIM25-208ENST00000574234 AMPD3Q01432 767 aa6.11□□□□□ -1.43
TRIM25-208ENST00000574234 CAMK2GQ13555 558 aaPredicted RBP6.11□□□□□ -1.43
TRIM25-208ENST00000574234 MBTPS1Q14703 1052 aa6.11□□□□□ -1.43
TRIM25-208ENST00000574234 PLEKHG6Q3KR16 790 aa6.11□□□□□ -1.43
TRIM25-208ENST00000574234 FAM83BQ5T0W9 1011 aa6.11□□□□□ -1.43
TRIM25-208ENST00000574234 TMEM63BQ5T3F8 832 aa6.11□□□□□ -1.43
TRIM25-208ENST00000574234 GORABQ5T7V8 394 aa6.11□□□□□ -1.43
TRIM25-208ENST00000574234 GDF6Q6KF10 455 aaPredicted RBP6.11□□□□□ -1.43
TRIM25-208ENST00000574234 KIAA1211Q6ZU35 1233 aa6.11□□□□□ -1.43
TRIM25-208ENST00000574234 KIAA0907Q7Z7F0 614 aaPredicted RBP6.11□□□□□ -1.43
TRIM25-208ENST00000574234 FBXO16Q8IX29 292 aaPredicted RBP6.11□□□□□ -1.43
TRIM25-208ENST00000574234 DCLK2Q8N568 766 aa6.11□□□□□ -1.43
TRIM25-208ENST00000574234 MEIOBQ8N635 442 aa6.11□□□□□ -1.43
TRIM25-208ENST00000574234 SUMF1Q8NBK3 374 aa6.11□□□□□ -1.43
TRIM25-208ENST00000574234 NKD1Q969G9 470 aa6.11□□□□□ -1.43
TRIM25-208ENST00000574234 CCDC17Q96LX7 622 aa6.11□□□□□ -1.43
TRIM25-208ENST00000574234 INSM2Q96T92 566 aaPredicted RBP6.11□□□□□ -1.43
TRIM25-208ENST00000574234 DNAJC7Q99615 494 aa6.11□□□□□ -1.43
TRIM25-208ENST00000574234 ACAD9Q9H845 621 aa6.11□□□□□ -1.43
TRIM25-208ENST00000574234 SLC38A10Q9HBR0 1119 aa6.11□□□□□ -1.43
TRIM25-208ENST00000574234 ANGPTL2Q9UKU9 493 aa6.11□□□□□ -1.43
TRIM25-208ENST00000574234 BARX2Q9UMQ3 279 aaPredicted RBP6.11□□□□□ -1.43
TRIM25-208ENST00000574234 TLR6Q9Y2C9 796 aa6.11□□□□□ -1.43
TRIM25-208ENST00000574234 R3HCC1Q9Y3T6 440 aaKnown RBP6.11□□□□□ -1.43
TRIM25-208ENST00000574234 R4GN57 208 aa6.11□□□□□ -1.43
TRIM25-208ENST00000574234 ADGRA3Q8IWK6 1321 aa6.1□□□□□ -1.43
TRIM25-208ENST00000574234 C2orf16Q68DN1 1984 aa6.1□□□□□ -1.43
TRIM25-208ENST00000574234 ZBED4O75132 1171 aa6.1□□□□□ -1.43
TRIM25-208ENST00000574234 FBXO24O75426 580 aa6.1□□□□□ -1.43
TRIM25-208ENST00000574234 PROS1P07225 676 aa6.1□□□□□ -1.43
TRIM25-208ENST00000574234 EEF2P13639 858 aaKnown RBP6.1□□□□□ -1.43
TRIM25-208ENST00000574234 SLC19A1P41440 591 aa6.1□□□□□ -1.43
TRIM25-208ENST00000574234 SHC2P98077 582 aa6.1□□□□□ -1.43
TRIM25-208ENST00000574234 EXOSC9Q06265 439 aaKnown RBP6.1□□□□□ -1.43
TRIM25-208ENST00000574234 APOBRQ0VD83 1088 aa6.1□□□□□ -1.43
TRIM25-208ENST00000574234 TFCP2Q12800 502 aa6.1□□□□□ -1.43
TRIM25-208ENST00000574234 POU4F2Q12837 409 aa6.1□□□□□ -1.43
TRIM25-208ENST00000574234 COL9A3Q14050 684 aaPredicted RBP6.1□□□□□ -1.43
TRIM25-208ENST00000574234 TNNI3KQ59H18 835 aa6.1□□□□□ -1.43
TRIM25-208ENST00000574234 WDR44Q5JSH3 913 aa6.1□□□□□ -1.43
TRIM25-208ENST00000574234 TMEM184AQ6ZMB5 413 aa6.1□□□□□ -1.43
TRIM25-208ENST00000574234 CLEC10AQ8IUN9 316 aa6.1□□□□□ -1.43
TRIM25-208ENST00000574234 CPXCR1Q8N123 301 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms