RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, human

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC27-213	ENST00000571643	GOLGA6L22	H0YM25	854 aa		4.99	□□□□□ -1.61
CDC27-213	ENST00000571643		H7C1D1	291 aa		4.99	□□□□□ -1.61
CDC27-213	ENST00000571643		M0R2C6	588 aa		4.99	□□□□□ -1.61
CDC27-213	ENST00000571643	MAFG	O15525	162 aa		4.99	□□□□□ -1.61
CDC27-213	ENST00000571643	FOXS1	O43638	330 aa		4.99	□□□□□ -1.61
CDC27-213	ENST00000571643	TACR2	P21452	398 aa		4.99	□□□□□ -1.61
CDC27-213	ENST00000571643	MRE11	P49959	708 aa		4.99	□□□□□ -1.61
CDC27-213	ENST00000571643	MECP2	P51608	486 aa	Known RBP	4.99	□□□□□ -1.61
CDC27-213	ENST00000571643	ROM1	Q03395	351 aa		4.99	□□□□□ -1.61
CDC27-213	ENST00000571643	R3HDM1	Q15032	1099 aa	Known RBP	4.99	□□□□□ -1.61
CDC27-213	ENST00000571643	PCOLCE	Q15113	449 aa		4.99	□□□□□ -1.61
CDC27-213	ENST00000571643	SEC23A	Q15436	765 aa		4.99	□□□□□ -1.61
CDC27-213	ENST00000571643	ZNF174	Q15697	407 aa		4.99	□□□□□ -1.61
CDC27-213	ENST00000571643	CATSPERE	Q5SY80	951 aa		4.99	□□□□□ -1.61
CDC27-213	ENST00000571643	TRIM68	Q6AZZ1	485 aa		4.99	□□□□□ -1.61
CDC27-213	ENST00000571643	UBE2R2	Q712K3	238 aa	Predicted RBP	4.99	□□□□□ -1.61
CDC27-213	ENST00000571643	PALM2	Q8IXS6	379 aa		4.99	□□□□□ -1.61
CDC27-213	ENST00000571643	C12orf65	Q9H3J6	166 aa	Known RBP	4.99	□□□□□ -1.61
CDC27-213	ENST00000571643	NELFA	Q9H3P2	528 aa		4.99	□□□□□ -1.61
CDC27-213	ENST00000571643	SAMD15	Q9P1V8	674 aa		4.99	□□□□□ -1.61
CDC27-213	ENST00000571643	WDR7	Q9Y4E6	1490 aa		4.99	□□□□□ -1.61
CDC27-213	ENST00000571643	RASSF10	A6NK89	507 aa		4.98	□□□□□ -1.61
CDC27-213	ENST00000571643	RFPL3	O75679	317 aa		4.98	□□□□□ -1.61
CDC27-213	ENST00000571643	RAPGEF3	O95398	923 aa		4.98	□□□□□ -1.61
CDC27-213	ENST00000571643	CYP17A1	P05093	508 aa		4.98	□□□□□ -1.61
CDC27-213	ENST00000571643	C6	P13671	934 aa		4.98	□□□□□ -1.61
CDC27-213	ENST00000571643	KCNA6	P17658	529 aa		4.98	□□□□□ -1.61
CDC27-213	ENST00000571643	KIF11	P52732	1056 aa		4.98	□□□□□ -1.61
CDC27-213	ENST00000571643	ABHD17C	Q6PCB6	329 aa		4.98	□□□□□ -1.61
CDC27-213	ENST00000571643	KLHDC10	Q6PID8	442 aa		4.98	□□□□□ -1.61
CDC27-213	ENST00000571643	LRSAM1	Q6UWE0	723 aa		4.98	□□□□□ -1.61
CDC27-213	ENST00000571643	FILIP1	Q7Z7B0	1213 aa		4.98	□□□□□ -1.61
CDC27-213	ENST00000571643	FUK	Q8N0W3	1084 aa		4.98	□□□□□ -1.61
CDC27-213	ENST00000571643	SH3TC2	Q8TF17	1288 aa		4.98	□□□□□ -1.61
CDC27-213	ENST00000571643	ADO	Q96SZ5	270 aa		4.98	□□□□□ -1.61
CDC27-213	ENST00000571643	DPYSL5	Q9BPU6	564 aa		4.98	□□□□□ -1.61
CDC27-213	ENST00000571643	KIAA1683	Q9H0B3	1180 aa		4.98	□□□□□ -1.61
CDC27-213	ENST00000571643	VPS11	Q9H270	941 aa		4.98	□□□□□ -1.61
CDC27-213	ENST00000571643	ZSWIM4	Q9H7M6	989 aa		4.98	□□□□□ -1.61
CDC27-213	ENST00000571643	INTS7	Q9NVH2	962 aa	Known RBP	4.98	□□□□□ -1.61
CDC27-213	ENST00000571643	TMEM260	Q9NX78	707 aa		4.98	□□□□□ -1.61
CDC27-213	ENST00000571643	ATP10B	O94823	1461 aa		4.98	□□□□□ -1.61
CDC27-213	ENST00000571643	TEX14	Q8IWB6	1497 aa		4.98	□□□□□ -1.61
CDC27-213	ENST00000571643	ARHGAP35	Q9NRY4	1499 aa		4.98	□□□□□ -1.61
CDC27-213	ENST00000571643	EPRS	P07814	1512 aa	Known RBP	4.97	□□□□□ -1.61
CDC27-213	ENST00000571643	CFAP43	Q8NDM7	1665 aa		4.97	□□□□□ -1.61
CDC27-213	ENST00000571643	NUP153	P49790	1475 aa	Known RBP	4.97	□□□□□ -1.61
CDC27-213	ENST00000571643	UBA6	A0AVT1	1052 aa	Predicted RBP	4.97	□□□□□ -1.61
CDC27-213	ENST00000571643	PLEKHD1	A6NEE1	506 aa		4.97	□□□□□ -1.61
CDC27-213	ENST00000571643	H2AFY	O75367	372 aa	Known RBP	4.97	□□□□□ -1.61
CDC27-213	ENST00000571643	KRT37	O76014	449 aa		4.97	□□□□□ -1.61
CDC27-213	ENST00000571643	PRL	P01236	227 aa		4.97	□□□□□ -1.61
CDC27-213	ENST00000571643	ZBTB48	P10074	688 aa	Predicted RBP	4.97	□□□□□ -1.61
CDC27-213	ENST00000571643	GDF5	P43026	501 aa		4.97	□□□□□ -1.61
CDC27-213	ENST00000571643	HHEX	Q03014	270 aa		4.97	□□□□□ -1.61
CDC27-213	ENST00000571643	TM4SF20	Q53R12	229 aa		4.97	□□□□□ -1.61
CDC27-213	ENST00000571643	FSTL4	Q6MZW2	842 aa		4.97	□□□□□ -1.61
CDC27-213	ENST00000571643	CRIP3	Q6Q6R5	217 aa		4.97	□□□□□ -1.61
CDC27-213	ENST00000571643	LARP4	Q71RC2	724 aa	Known RBP eCLIP	4.97	□□□□□ -1.61
CDC27-213	ENST00000571643	SPRED1	Q7Z699	444 aa		4.97	□□□□□ -1.61
CDC27-213	ENST00000571643	RTN4RL1	Q86UN2	441 aa	Predicted RBP	4.97	□□□□□ -1.61
CDC27-213	ENST00000571643	ERCC4	Q92889	916 aa	Predicted RBP	4.97	□□□□□ -1.61
CDC27-213	ENST00000571643	GFM2	Q969S9	779 aa	Known RBP	4.97	□□□□□ -1.61
CDC27-213	ENST00000571643	WWC2-AS2	Q96NR7	200 aa		4.97	□□□□□ -1.61
CDC27-213	ENST00000571643	OR14A2	Q96R54	314 aa		4.97	□□□□□ -1.61
CDC27-213	ENST00000571643	PLA2G12B	Q9BX93	195 aa		4.97	□□□□□ -1.61
CDC27-213	ENST00000571643	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	4.97	□□□□□ -1.61
CDC27-213	ENST00000571643	SAE1	Q9UBE0	346 aa	Predicted RBP	4.97	□□□□□ -1.61
CDC27-213	ENST00000571643	MAGEC2	Q9UBF1	373 aa	Predicted RBP	4.97	□□□□□ -1.61
CDC27-213	ENST00000571643	CDC42EP3	Q9UKI2	254 aa		4.97	□□□□□ -1.61
CDC27-213	ENST00000571643	FAM184B	Q9ULE4	1060 aa		4.97	□□□□□ -1.61
CDC27-213	ENST00000571643	HECW1	Q76N89	1606 aa		4.97	□□□□□ -1.61
CDC27-213	ENST00000571643	MAP3K4	Q9Y6R4	1608 aa		4.97	□□□□□ -1.61
CDC27-213	ENST00000571643	MAGI3	Q5TCQ9	1506 aa		4.97	□□□□□ -1.61
CDC27-213	ENST00000571643	CLIP1	P30622	1438 aa		4.97	□□□□□ -1.61
CDC27-213	ENST00000571643	CCDC18	Q5T9S5	1454 aa		4.96	□□□□□ -1.62
CDC27-213	ENST00000571643	CYR61	O00622	381 aa		4.96	□□□□□ -1.62
CDC27-213	ENST00000571643	CYP27B1	O15528	508 aa		4.96	□□□□□ -1.62
CDC27-213	ENST00000571643	SLC26A4	O43511	780 aa		4.96	□□□□□ -1.62
CDC27-213	ENST00000571643	FZD7	O75084	574 aa		4.96	□□□□□ -1.62
CDC27-213	ENST00000571643	DNAJC8	O75937	253 aa	Predicted RBP	4.96	□□□□□ -1.62
CDC27-213	ENST00000571643	GLRX3	O76003	335 aa	Known RBP	4.96	□□□□□ -1.62
CDC27-213	ENST00000571643	ADCY1	Q08828	1119 aa		4.96	□□□□□ -1.62
CDC27-213	ENST00000571643	SQSTM1	Q13501	440 aa		4.96	□□□□□ -1.62
CDC27-213	ENST00000571643	TCEA2	Q15560	299 aa		4.96	□□□□□ -1.62
CDC27-213	ENST00000571643	DGKD	Q16760	1214 aa		4.96	□□□□□ -1.62
CDC27-213	ENST00000571643	SPDYA	Q5MJ70	313 aa		4.96	□□□□□ -1.62
CDC27-213	ENST00000571643	TTC38	Q5R3I4	469 aa		4.96	□□□□□ -1.62
CDC27-213	ENST00000571643	ADGRE4P	Q86SQ3	457 aa		4.96	□□□□□ -1.62
CDC27-213	ENST00000571643	ZZZ3	Q8IYH5	903 aa		4.96	□□□□□ -1.62
CDC27-213	ENST00000571643	RPGR	Q92834	1020 aa	Known RBP	4.96	□□□□□ -1.62
CDC27-213	ENST00000571643	FOXRED1	Q96CU9	486 aa	Predicted RBP	4.96	□□□□□ -1.62
CDC27-213	ENST00000571643	MAML3	Q96JK9	1138 aa		4.96	□□□□□ -1.62
CDC27-213	ENST00000571643	TNPO3	Q9Y5L0	923 aa	Known RBP	4.96	□□□□□ -1.62
CDC27-213	ENST00000571643	FHOD3	Q2V2M9	1422 aa		4.96	□□□□□ -1.62
CDC27-213	ENST00000571643	CASKIN1	Q8WXD9	1431 aa		4.96	□□□□□ -1.62
CDC27-213	ENST00000571643	FYCO1	Q9BQS8	1478 aa		4.95	□□□□□ -1.62
CDC27-213	ENST00000571643	ABCA9	Q8IUA7	1624 aa		4.95	□□□□□ -1.62
CDC27-213	ENST00000571643	PTPDC1	A2A3K4	754 aa		4.95	□□□□□ -1.62
CDC27-213	ENST00000571643	STAT5B	P51692	787 aa		4.95	□□□□□ -1.62

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