RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 PKP1Q13835 747 aa14.95□□□□□ -0.02
CCDC40-205ENST00000571028 PTPN21Q16825 1174 aa14.95□□□□□ -0.02
CCDC40-205ENST00000571028 TAF2Q6P1X5 1199 aa14.95□□□□□ -0.02
CCDC40-205ENST00000571028 ADGRD2Q7Z7M1 963 aa14.95□□□□□ -0.02
CCDC40-205ENST00000571028 TRIM50Q86XT4 487 aa14.95□□□□□ -0.02
CCDC40-205ENST00000571028 LMBR1Q8WVP7 490 aa14.95□□□□□ -0.02
CCDC40-205ENST00000571028 SEPT1Q8WYJ6 367 aa14.95□□□□□ -0.02
CCDC40-205ENST00000571028 TLE6Q9H808 572 aa14.95□□□□□ -0.02
CCDC40-205ENST00000571028 TBC1D22BQ9NU19 505 aa14.95□□□□□ -0.02
CCDC40-205ENST00000571028 MRPL42Q9Y6G3 142 aaKnown RBP14.95□□□□□ -0.02
CCDC40-205ENST00000571028 NFASCO94856 1347 aa14.94□□□□□ -0.02
CCDC40-205ENST00000571028 NRCAMQ92823 1304 aa14.94□□□□□ -0.02
CCDC40-205ENST00000571028 GSTTP1A0A1W2PQM5 241 aa14.94□□□□□ -0.02
CCDC40-205ENST00000571028 FSD2A1L4K1 749 aa14.94□□□□□ -0.02
CCDC40-205ENST00000571028 ENPP3O14638 875 aa14.94□□□□□ -0.02
CCDC40-205ENST00000571028 BACH1O14867 736 aa14.94□□□□□ -0.02
CCDC40-205ENST00000571028 DHX15O43143 795 aaKnown RBP14.94□□□□□ -0.02
CCDC40-205ENST00000571028 DGKIO75912 1065 aa14.94□□□□□ -0.02
CCDC40-205ENST00000571028 CCNE2O96020 404 aa14.94□□□□□ -0.02
CCDC40-205ENST00000571028 ITGB1P05556 798 aa14.94□□□□□ -0.02
CCDC40-205ENST00000571028 SRGAP2BP0DMP2 458 aa14.94□□□□□ -0.02
CCDC40-205ENST00000571028 TCF7P36402 384 aaPredicted RBP14.94□□□□□ -0.02
CCDC40-205ENST00000571028 PAN2Q504Q3 1202 aaKnown RBP14.94□□□□□ -0.02
CCDC40-205ENST00000571028 RILPL1Q5EBL4 403 aa14.94□□□□□ -0.02
CCDC40-205ENST00000571028 ERMP1Q7Z2K6 904 aa14.94□□□□□ -0.02
CCDC40-205ENST00000571028 TRMT1LQ7Z2T5 733 aaKnown RBP14.94□□□□□ -0.02
CCDC40-205ENST00000571028 BRAPQ7Z569 592 aa14.94□□□□□ -0.02
CCDC40-205ENST00000571028 CMTR2Q8IYT2 770 aaKnown RBP14.94□□□□□ -0.02
CCDC40-205ENST00000571028 KLHL23Q8NBE8 558 aa14.94□□□□□ -0.02
CCDC40-205ENST00000571028 ETNPPLQ8TBG4 499 aa14.94□□□□□ -0.02
CCDC40-205ENST00000571028 POF1BQ8WVV4 589 aa14.94□□□□□ -0.02
CCDC40-205ENST00000571028 HAS1Q92839 578 aa14.94□□□□□ -0.02
CCDC40-205ENST00000571028 SLC5A5Q92911 643 aa14.94□□□□□ -0.02
CCDC40-205ENST00000571028 ZNF689Q96CS4 500 aaPredicted RBP14.94□□□□□ -0.02
CCDC40-205ENST00000571028 ASIC4Q96FT7 647 aa14.94□□□□□ -0.02
CCDC40-205ENST00000571028 TMEM60Q9H2L4 133 aa14.94□□□□□ -0.02
CCDC40-205ENST00000571028 UNC45AQ9H3U1 944 aa14.94□□□□□ -0.02
CCDC40-205ENST00000571028 RC3H2Q9HBD1 1191 aaKnown RBP14.94□□□□□ -0.02
CCDC40-205ENST00000571028 RBM19Q9Y4C8 960 aaKnown RBP14.94□□□□□ -0.02
CCDC40-205ENST00000571028 CHRNA1P02708 482 aa14.93□□□□□ -0.02
CCDC40-205ENST00000571028 ZSCAN22P10073 491 aaPredicted RBP14.93□□□□□ -0.02
CCDC40-205ENST00000571028 ATF7P17544 494 aaPredicted RBP14.93□□□□□ -0.02
CCDC40-205ENST00000571028 DNAJB1P25685 340 aa14.93□□□□□ -0.02
CCDC40-205ENST00000571028 MARK3P27448 753 aa14.93□□□□□ -0.02
CCDC40-205ENST00000571028 TRAPPC10P48553 1259 aa14.93□□□□□ -0.02
CCDC40-205ENST00000571028 CEBPZQ03701 1054 aaKnown RBP14.93□□□□□ -0.02
CCDC40-205ENST00000571028 CAMK1Q14012 370 aa14.93□□□□□ -0.02
CCDC40-205ENST00000571028 LPIN1Q14693 890 aa14.93□□□□□ -0.02
CCDC40-205ENST00000571028 NCAPH2Q6IBW4 605 aa14.93□□□□□ -0.02
CCDC40-205ENST00000571028 MIS18BP1Q6P0N0 1132 aa14.93□□□□□ -0.02
CCDC40-205ENST00000571028 MIER3Q7Z3K6 550 aa14.93□□□□□ -0.02
CCDC40-205ENST00000571028 SPPL3Q8TCT6 385 aa14.93□□□□□ -0.02
CCDC40-205ENST00000571028 GLG1Q92896 1179 aa14.93□□□□□ -0.02
CCDC40-205ENST00000571028 FAM20AQ96MK3 541 aa14.93□□□□□ -0.02
CCDC40-205ENST00000571028 RIT2Q99578 217 aa14.93□□□□□ -0.02
CCDC40-205ENST00000571028 ZDBF2Q9HCK1 2354 aa14.92□□□□□ -0.02
CCDC40-205ENST00000571028 PROB1E7EW31 1015 aa14.92□□□□□ -0.02
CCDC40-205ENST00000571028 GALR2O43603 387 aaPredicted RBP14.92□□□□□ -0.02
CCDC40-205ENST00000571028 PSMD10O75832 226 aa14.92□□□□□ -0.02
CCDC40-205ENST00000571028 STAG3L1P0CL83 205 aa14.92□□□□□ -0.02
CCDC40-205ENST00000571028 KRT76Q01546 638 aa14.92□□□□□ -0.02
CCDC40-205ENST00000571028 SPOUT1Q5T280 376 aaKnown RBP14.92□□□□□ -0.02
CCDC40-205ENST00000571028 SWSAP1Q6NVH7 229 aa14.92□□□□□ -0.02
CCDC40-205ENST00000571028 TSHZ1Q6ZSZ6 1077 aa14.92□□□□□ -0.02
CCDC40-205ENST00000571028 ASCL5Q7RTU5 278 aa14.92□□□□□ -0.02
CCDC40-205ENST00000571028 NPAS4Q8IUM7 802 aa14.92□□□□□ -0.02
CCDC40-205ENST00000571028 SLFN12Q8IYM2 578 aa14.92□□□□□ -0.02
CCDC40-205ENST00000571028 ZSCAN16Q9H4T2 348 aaPredicted RBP14.92□□□□□ -0.02
CCDC40-205ENST00000571028 AZI2Q9H6S1 392 aa14.92□□□□□ -0.02
CCDC40-205ENST00000571028 KCNMB3Q9NPA1 279 aa14.92□□□□□ -0.02
CCDC40-205ENST00000571028 LRFN2Q9ULH4 789 aa14.92□□□□□ -0.02
CCDC40-205ENST00000571028 TRPC6Q9Y210 931 aa14.92□□□□□ -0.02
CCDC40-205ENST00000571028 DOCK5Q9H7D0 1870 aa14.91□□□□□ -0.02
CCDC40-205ENST00000571028 PRR23AA6NEV1 266 aa14.91□□□□□ -0.02
CCDC40-205ENST00000571028 TBX3O15119 743 aa14.91□□□□□ -0.02
CCDC40-205ENST00000571028 GLP2RO95838 553 aa14.91□□□□□ -0.02
CCDC40-205ENST00000571028 F13A1P00488 732 aa14.91□□□□□ -0.02
CCDC40-205ENST00000571028 PSAPP07602 524 aa14.91□□□□□ -0.02
CCDC40-205ENST00000571028 OR52Z1P0C646 297 aa14.91□□□□□ -0.02
CCDC40-205ENST00000571028 IBSPP21815 317 aaPredicted RBP14.91□□□□□ -0.02
CCDC40-205ENST00000571028 PPFIA1Q13136 1202 aa14.91□□□□□ -0.02
CCDC40-205ENST00000571028 PTGDRQ13258 359 aa14.91□□□□□ -0.02
CCDC40-205ENST00000571028 ZNF746Q6NUN9 644 aaPredicted RBP14.91□□□□□ -0.02
CCDC40-205ENST00000571028 RUFY4Q6ZNE9 571 aa14.91□□□□□ -0.02
CCDC40-205ENST00000571028 CKAP2LQ8IYA6 745 aa14.91□□□□□ -0.02
CCDC40-205ENST00000571028 RIPOR3Q96MK2 946 aa14.91□□□□□ -0.02
CCDC40-205ENST00000571028 FTHL17Q9BXU8 183 aa14.91□□□□□ -0.02
CCDC40-205ENST00000571028 TTC12Q9H892 705 aaPredicted RBP14.91□□□□□ -0.02
CCDC40-205ENST00000571028 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.91□□□□□ -0.02
CCDC40-205ENST00000571028 DISC1Q9NRI5 854 aa14.91□□□□□ -0.02
CCDC40-205ENST00000571028 GABBR1Q9UBS5 961 aa14.91□□□□□ -0.02
CCDC40-205ENST00000571028 TUBE1Q9UJT0 475 aa14.91□□□□□ -0.02
CCDC40-205ENST00000571028 PCDHA12Q9UN75 941 aa14.91□□□□□ -0.02
CCDC40-205ENST00000571028 PCDHB12Q9Y5F1 795 aa14.91□□□□□ -0.02
CCDC40-205ENST00000571028 KMT2EQ8IZD2 1858 aa14.91□□□□□ -0.02
CCDC40-205ENST00000571028 WDR64B1ANS9 1081 aa14.9□□□□□ -0.02
CCDC40-205ENST00000571028 M0QZ92 97 aa14.9□□□□□ -0.02
CCDC40-205ENST00000571028 EML1O00423 815 aa14.9□□□□□ -0.02
CCDC40-205ENST00000571028 PER2O15055 1255 aa14.9□□□□□ -0.02
CCDC40-205ENST00000571028 SP100P23497 879 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms