RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 CLUL1Q15846 466 aa10.02□□□□□ -0.81
NPLOC4-204ENST00000570324 PPP4R3AQ6IN85 833 aa10.02□□□□□ -0.81
NPLOC4-204ENST00000570324 OTUD6AQ7L8S5 288 aa10.02□□□□□ -0.81
NPLOC4-204ENST00000570324 RBM23Q86U06 439 aaKnown RBP10.02□□□□□ -0.81
NPLOC4-204ENST00000570324 RHPN2Q8IUC4 686 aa10.02□□□□□ -0.81
NPLOC4-204ENST00000570324 FAM178BQ8IXR5 827 aa10.02□□□□□ -0.81
NPLOC4-204ENST00000570324 EXOC8Q8IYI6 725 aa10.02□□□□□ -0.81
NPLOC4-204ENST00000570324 GJD3Q8N144 294 aa10.02□□□□□ -0.81
NPLOC4-204ENST00000570324 CRIPAKQ8N1N5 446 aa10.02□□□□□ -0.81
NPLOC4-204ENST00000570324 NECAB1Q8N987 351 aa10.02□□□□□ -0.81
NPLOC4-204ENST00000570324 ETNPPLQ8TBG4 499 aa10.02□□□□□ -0.81
NPLOC4-204ENST00000570324 SPPL3Q8TCT6 385 aa10.02□□□□□ -0.81
NPLOC4-204ENST00000570324 NEK9Q8TD19 979 aa10.02□□□□□ -0.81
NPLOC4-204ENST00000570324 SH2D3AQ9BRG2 576 aa10.02□□□□□ -0.81
NPLOC4-204ENST00000570324 TMEM117Q9H0C3 514 aa10.02□□□□□ -0.81
NPLOC4-204ENST00000570324 ADAMTS10Q9H324 1103 aa10.02□□□□□ -0.81
NPLOC4-204ENST00000570324 GJB4Q9NTQ9 266 aa10.02□□□□□ -0.81
NPLOC4-204ENST00000570324 TYW1Q9NV66 732 aaKnown RBP10.02□□□□□ -0.81
NPLOC4-204ENST00000570324 SUCLA2Q9P2R7 463 aaPredicted RBP10.02□□□□□ -0.81
NPLOC4-204ENST00000570324 PUF60Q9UHX1 559 aaKnown RBP10.02□□□□□ -0.81
NPLOC4-204ENST00000570324 TBX3O15119 743 aa10.01□□□□□ -0.81
NPLOC4-204ENST00000570324 SLC37A4O43826 429 aa10.01□□□□□ -0.81
NPLOC4-204ENST00000570324 DTNBO60941 627 aa10.01□□□□□ -0.81
NPLOC4-204ENST00000570324 MAFO75444 373 aaPredicted RBP10.01□□□□□ -0.81
NPLOC4-204ENST00000570324 P4HBP07237 508 aaKnown RBP10.01□□□□□ -0.81
NPLOC4-204ENST00000570324 LINC00271P0C7V0 271 aa10.01□□□□□ -0.81
NPLOC4-204ENST00000570324 FGFR4P22455 802 aa10.01□□□□□ -0.81
NPLOC4-204ENST00000570324 NRIP1P48552 1158 aa10.01□□□□□ -0.81
NPLOC4-204ENST00000570324 POLGP54098 1239 aaPredicted RBP10.01□□□□□ -0.81
NPLOC4-204ENST00000570324 FAM189BP81408 668 aa10.01□□□□□ -0.81
NPLOC4-204ENST00000570324 KRT17Q04695 432 aa10.01□□□□□ -0.81
NPLOC4-204ENST00000570324 PPP2R5CQ13362 524 aa10.01□□□□□ -0.81
NPLOC4-204ENST00000570324 DSC3Q14574 896 aa10.01□□□□□ -0.81
NPLOC4-204ENST00000570324 TARBP2Q15633 366 aaKnown RBP10.01□□□□□ -0.81
NPLOC4-204ENST00000570324 NPY5RQ15761 445 aa10.01□□□□□ -0.81
NPLOC4-204ENST00000570324 NCAPH2Q6IBW4 605 aa10.01□□□□□ -0.81
NPLOC4-204ENST00000570324 SLFN12Q8IYM2 578 aa10.01□□□□□ -0.81
NPLOC4-204ENST00000570324 LRRC43Q8N309 656 aa10.01□□□□□ -0.81
NPLOC4-204ENST00000570324 LINC01465Q8N7H1 131 aa10.01□□□□□ -0.81
NPLOC4-204ENST00000570324 COLGALT1Q8NBJ5 622 aa10.01□□□□□ -0.81
NPLOC4-204ENST00000570324 OXER1Q8TDS5 423 aa10.01□□□□□ -0.81
NPLOC4-204ENST00000570324 SLC7A3Q8WY07 619 aa10.01□□□□□ -0.81
NPLOC4-204ENST00000570324 CEP170P1Q96L14 293 aa10.01□□□□□ -0.81
NPLOC4-204ENST00000570324 NLRP4Q96MN2 994 aa10.01□□□□□ -0.81
NPLOC4-204ENST00000570324 CCDC43Q96MW1 224 aaKnown RBP10.01□□□□□ -0.81
NPLOC4-204ENST00000570324 TLE6Q9H808 572 aa10.01□□□□□ -0.81
NPLOC4-204ENST00000570324 KIAA1671Q9BY89 1806 aa10□□□□□ -0.81
NPLOC4-204ENST00000570324 UNC80Q8N2C7 3258 aa10□□□□□ -0.81
NPLOC4-204ENST00000570324 A0A087WZ62 844 aa10□□□□□ -0.81
NPLOC4-204ENST00000570324 TMEM150BA6NC51 233 aa10□□□□□ -0.81
NPLOC4-204ENST00000570324 CSDE1O75534 798 aaKnown RBP10□□□□□ -0.81
NPLOC4-204ENST00000570324 FGF18O76093 207 aa10□□□□□ -0.81
NPLOC4-204ENST00000570324 EOMESO95936 686 aa10□□□□□ -0.81
NPLOC4-204ENST00000570324 SRGAP2BP0DMP2 458 aa10□□□□□ -0.81
NPLOC4-204ENST00000570324 SKIP12755 728 aa10□□□□□ -0.81
NPLOC4-204ENST00000570324 DNAJB1P25685 340 aa10□□□□□ -0.81
NPLOC4-204ENST00000570324 CA8P35219 290 aa10□□□□□ -0.81
NPLOC4-204ENST00000570324 FOSBP53539 338 aa10□□□□□ -0.81
NPLOC4-204ENST00000570324 NR5A1Q13285 461 aa10□□□□□ -0.81
NPLOC4-204ENST00000570324 DRP2Q13474 957 aa10□□□□□ -0.81
NPLOC4-204ENST00000570324 EPHA7Q15375 998 aa10□□□□□ -0.81
NPLOC4-204ENST00000570324 SAFBQ15424 915 aaKnown RBP eCLIP10□□□□□ -0.81
NPLOC4-204ENST00000570324 ME3Q16798 604 aa10□□□□□ -0.81
NPLOC4-204ENST00000570324 XKR9Q5GH70 373 aa10□□□□□ -0.81
NPLOC4-204ENST00000570324 TMEM31Q5JXX7 168 aa10□□□□□ -0.81
NPLOC4-204ENST00000570324 PLA2G4FQ68DD2 849 aa10□□□□□ -0.81
NPLOC4-204ENST00000570324 TWF2Q6IBS0 349 aaKnown RBP10□□□□□ -0.81
NPLOC4-204ENST00000570324 PDE12Q6L8Q7 609 aaKnown RBP10□□□□□ -0.81
NPLOC4-204ENST00000570324 B3GNT9Q6UX72 402 aa10□□□□□ -0.81
NPLOC4-204ENST00000570324 ANO5Q75V66 913 aa10□□□□□ -0.81
NPLOC4-204ENST00000570324 CATSPER4Q7RTX7 472 aa10□□□□□ -0.81
NPLOC4-204ENST00000570324 ZNF410Q86VK4 478 aa10□□□□□ -0.81
NPLOC4-204ENST00000570324 ECHDC2Q86YB7 292 aa10□□□□□ -0.81
NPLOC4-204ENST00000570324 POTEDQ86YR6 584 aa10□□□□□ -0.81
NPLOC4-204ENST00000570324 GTF3C6Q969F1 213 aa10□□□□□ -0.81
NPLOC4-204ENST00000570324 ZNF558Q96NG5 402 aa10□□□□□ -0.81
NPLOC4-204ENST00000570324 POP1Q99575 1024 aaKnown RBP10□□□□□ -0.81
NPLOC4-204ENST00000570324 FDXACB1Q9BRP7 624 aaPredicted RBP10□□□□□ -0.81
NPLOC4-204ENST00000570324 EPHX3Q9H6B9 360 aa10□□□□□ -0.81
NPLOC4-204ENST00000570324 KCNMB3Q9NPA1 279 aa10□□□□□ -0.81
NPLOC4-204ENST00000570324 ENTPD7Q9NQZ7 604 aa10□□□□□ -0.81
NPLOC4-204ENST00000570324 CYP26B1Q9NR63 512 aa10□□□□□ -0.81
NPLOC4-204ENST00000570324 TLR9Q9NR96 1032 aa10□□□□□ -0.81
NPLOC4-204ENST00000570324 CHST12Q9NRB3 414 aa10□□□□□ -0.81
NPLOC4-204ENST00000570324 PRKAG3Q9UGI9 489 aa10□□□□□ -0.81
NPLOC4-204ENST00000570324 CD207Q9UJ71 328 aa10□□□□□ -0.81
NPLOC4-204ENST00000570324 FNDC1Q4ZHG4 1894 aaPredicted RBP10□□□□□ -0.81
NPLOC4-204ENST00000570324 IGKV6-21A0A0C4DH24 114 aa9.99□□□□□ -0.81
NPLOC4-204ENST00000570324 A0A0U1RQF3 1178 aa9.99□□□□□ -0.81
NPLOC4-204ENST00000570324 FSD2A1L4K1 749 aa9.99□□□□□ -0.81
NPLOC4-204ENST00000570324 EML1O00423 815 aa9.99□□□□□ -0.81
NPLOC4-204ENST00000570324 LINC01565O15544 149 aa9.99□□□□□ -0.81
NPLOC4-204ENST00000570324 CTDNEP1O95476 244 aa9.99□□□□□ -0.81
NPLOC4-204ENST00000570324 ALADP13716 330 aa9.99□□□□□ -0.81
NPLOC4-204ENST00000570324 YWHABP31946 246 aaKnown RBP9.99□□□□□ -0.81
NPLOC4-204ENST00000570324 GTF2F1P35269 517 aaKnown RBP eCLIP9.99□□□□□ -0.81
NPLOC4-204ENST00000570324 IRS1P35568 1242 aa9.99□□□□□ -0.81
NPLOC4-204ENST00000570324 PPM1AP35813 382 aa9.99□□□□□ -0.81
NPLOC4-204ENST00000570324 LTBRP36941 435 aa9.99□□□□□ -0.81
NPLOC4-204ENST00000570324 RFC5P40937 340 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms