RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 PRR23CQ6ZRP0 262 aa7.33□□□□□ -1.24
UBFD1-209ENST00000569919 FAM214BQ7L5A3 538 aa7.33□□□□□ -1.24
UBFD1-209ENST00000569919 ADAT2Q7Z6V5 191 aaKnown RBP7.33□□□□□ -1.24
UBFD1-209ENST00000569919 ZAR1Q86SH2 424 aa7.33□□□□□ -1.24
UBFD1-209ENST00000569919 SHISA5Q8N114 240 aa7.33□□□□□ -1.24
UBFD1-209ENST00000569919 ZGPATQ8N5A5 531 aaKnown RBP7.33□□□□□ -1.24
UBFD1-209ENST00000569919 ARRDC4Q8NCT1 418 aa7.33□□□□□ -1.24
UBFD1-209ENST00000569919 ATXN2LQ8WWM7 1075 aaKnown RBP7.33□□□□□ -1.24
UBFD1-209ENST00000569919 LPIN2Q92539 896 aa7.33□□□□□ -1.24
UBFD1-209ENST00000569919 LPAR1Q92633 364 aa7.33□□□□□ -1.24
UBFD1-209ENST00000569919 USP6NLQ92738 828 aa7.33□□□□□ -1.24
UBFD1-209ENST00000569919 EDC3Q96F86 508 aaKnown RBP7.33□□□□□ -1.24
UBFD1-209ENST00000569919 KAZALD1Q96I82 304 aa7.33□□□□□ -1.24
UBFD1-209ENST00000569919 SUCLG2Q96I99 432 aa7.33□□□□□ -1.24
UBFD1-209ENST00000569919 P2RX7Q99572 595 aaKnown RBP7.33□□□□□ -1.24
UBFD1-209ENST00000569919 TTYH1Q9H313 450 aaPredicted RBP7.33□□□□□ -1.24
UBFD1-209ENST00000569919 PRDM5Q9NQX1 630 aaPredicted RBP7.33□□□□□ -1.24
UBFD1-209ENST00000569919 DENND2AQ9ULE3 1009 aa7.33□□□□□ -1.24
UBFD1-209ENST00000569919 ATRNL1Q5VV63 1379 aa7.33□□□□□ -1.24
UBFD1-209ENST00000569919 UTYO14607 1347 aa7.32□□□□□ -1.24
UBFD1-209ENST00000569919 SALL1Q9NSC2 1324 aa7.32□□□□□ -1.24
UBFD1-209ENST00000569919 C19orf81C9J6K1 198 aa7.32□□□□□ -1.24
UBFD1-209ENST00000569919 GLRX3O76003 335 aaKnown RBP7.32□□□□□ -1.24
UBFD1-209ENST00000569919 MAP4K4O95819 1239 aaPredicted RBP7.32□□□□□ -1.24
UBFD1-209ENST00000569919 NAT2P11245 290 aa7.32□□□□□ -1.24
UBFD1-209ENST00000569919 RTP1P59025 263 aa7.32□□□□□ -1.24
UBFD1-209ENST00000569919 C2orf27AQ580R0 203 aa7.32□□□□□ -1.24
UBFD1-209ENST00000569919 SFRP5Q5T4F7 317 aa7.32□□□□□ -1.24
UBFD1-209ENST00000569919 EGFLAMQ63HQ2 1017 aa7.32□□□□□ -1.24
UBFD1-209ENST00000569919 SPTY2D1Q68D10 685 aaPredicted RBP7.32□□□□□ -1.24
UBFD1-209ENST00000569919 SLC4A10Q6U841 1118 aa7.32□□□□□ -1.24
UBFD1-209ENST00000569919 SLC39A5Q6ZMH5 540 aa7.32□□□□□ -1.24
UBFD1-209ENST00000569919 PLEKHH3Q7Z736 793 aa7.32□□□□□ -1.24
UBFD1-209ENST00000569919 FBXL6Q8N531 539 aa7.32□□□□□ -1.24
UBFD1-209ENST00000569919 THAP3Q8WTV1 239 aaPredicted RBP7.32□□□□□ -1.24
UBFD1-209ENST00000569919 BADQ92934 168 aa7.32□□□□□ -1.24
UBFD1-209ENST00000569919 MFSD14AQ96MC6 490 aa7.32□□□□□ -1.24
UBFD1-209ENST00000569919 HEXIM2Q96MH2 286 aaKnown RBP7.32□□□□□ -1.24
UBFD1-209ENST00000569919 SPATA9Q9BWV2 254 aa7.32□□□□□ -1.24
UBFD1-209ENST00000569919 BICC1Q9H694 974 aaKnown RBP7.32□□□□□ -1.24
UBFD1-209ENST00000569919 TPSG1Q9NRR2 321 aa7.32□□□□□ -1.24
UBFD1-209ENST00000569919 TMOD4Q9NZQ9 345 aa7.32□□□□□ -1.24
UBFD1-209ENST00000569919 RBPJLQ9UBG7 517 aa7.32□□□□□ -1.24
UBFD1-209ENST00000569919 APEX2Q9UBZ4 518 aa7.32□□□□□ -1.24
UBFD1-209ENST00000569919 FBXL21Q9UKT6 434 aa7.32□□□□□ -1.24
UBFD1-209ENST00000569919 UNC80Q8N2C7 3258 aa7.32□□□□□ -1.24
UBFD1-209ENST00000569919 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.31□□□□□ -1.24
UBFD1-209ENST00000569919 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.31□□□□□ -1.24
UBFD1-209ENST00000569919 FAM170BA6NMN3 283 aa7.31□□□□□ -1.24
UBFD1-209ENST00000569919 AGRPO00253 132 aa7.31□□□□□ -1.24
UBFD1-209ENST00000569919 DNM1LO00429 736 aa7.31□□□□□ -1.24
UBFD1-209ENST00000569919 ENPP3O14638 875 aa7.31□□□□□ -1.24
UBFD1-209ENST00000569919 CBX7O95931 251 aa7.31□□□□□ -1.24
UBFD1-209ENST00000569919 ITGB2P05107 769 aa7.31□□□□□ -1.24
UBFD1-209ENST00000569919 NBPF7P0C2Y1 421 aaPredicted RBP7.31□□□□□ -1.24
UBFD1-209ENST00000569919 HSD3B2P26439 372 aa7.31□□□□□ -1.24
UBFD1-209ENST00000569919 CNGA1P29973 690 aa7.31□□□□□ -1.24
UBFD1-209ENST00000569919 HERVK_113P62684 666 aa7.31□□□□□ -1.24
UBFD1-209ENST00000569919 SQSTM1Q13501 440 aa7.31□□□□□ -1.24
UBFD1-209ENST00000569919 CCL14Q16627 93 aa7.31□□□□□ -1.24
UBFD1-209ENST00000569919 C9orf50Q5SZB4 431 aa7.31□□□□□ -1.24
UBFD1-209ENST00000569919 GPR142Q7Z601 462 aa7.31□□□□□ -1.24
UBFD1-209ENST00000569919 LRRC47Q8N1G4 583 aaKnown RBP7.31□□□□□ -1.24
UBFD1-209ENST00000569919 ZNF513Q8N8E2 541 aaPredicted RBP7.31□□□□□ -1.24
UBFD1-209ENST00000569919 PPP1R14AQ96A00 147 aa7.31□□□□□ -1.24
UBFD1-209ENST00000569919 COX4I2Q96KJ9 171 aa7.31□□□□□ -1.24
UBFD1-209ENST00000569919 ASB2Q96Q27 587 aa7.31□□□□□ -1.24
UBFD1-209ENST00000569919 GBP3Q9H0R5 595 aa7.31□□□□□ -1.24
UBFD1-209ENST00000569919 CWC22Q9HCG8 908 aaKnown RBP7.31□□□□□ -1.24
UBFD1-209ENST00000569919 GP6Q9HCN6 339 aa7.31□□□□□ -1.24
UBFD1-209ENST00000569919 FANCLQ9NW38 375 aa7.31□□□□□ -1.24
UBFD1-209ENST00000569919 DDX20Q9UHI6 824 aaKnown RBP7.31□□□□□ -1.24
UBFD1-209ENST00000569919 RAPGEFL1Q9UHV5 662 aa7.31□□□□□ -1.24
UBFD1-209ENST00000569919 ATP11BQ9Y2G3 1177 aa7.31□□□□□ -1.24
UBFD1-209ENST00000569919 PCDHB12Q9Y5F1 795 aa7.31□□□□□ -1.24
UBFD1-209ENST00000569919 LAMA3Q16787 3333 aa7.3□□□□□ -1.24
UBFD1-209ENST00000569919 GAKO14976 1311 aa7.3□□□□□ -1.24
UBFD1-209ENST00000569919 ESYT3A0FGR9 886 aa7.3□□□□□ -1.24
UBFD1-209ENST00000569919 EYA2O00167 538 aa7.3□□□□□ -1.24
UBFD1-209ENST00000569919 PPM1BO75688 479 aa7.3□□□□□ -1.24
UBFD1-209ENST00000569919 LDHCP07864 332 aa7.3□□□□□ -1.24
UBFD1-209ENST00000569919 BACE1P56817 501 aa7.3□□□□□ -1.24
UBFD1-209ENST00000569919 CCNA1P78396 465 aa7.3□□□□□ -1.24
UBFD1-209ENST00000569919 MRPS5P82675 430 aaKnown RBP7.3□□□□□ -1.24
UBFD1-209ENST00000569919 MAP3K12Q12852 859 aa7.3□□□□□ -1.24
UBFD1-209ENST00000569919 DDX10Q13206 875 aaKnown RBP7.3□□□□□ -1.24
UBFD1-209ENST00000569919 PICALMQ13492 652 aa7.3□□□□□ -1.24
UBFD1-209ENST00000569919 SNW1Q13573 536 aaKnown RBP7.3□□□□□ -1.24
UBFD1-209ENST00000569919 PLA2G4EQ3MJ16 856 aa7.3□□□□□ -1.24
UBFD1-209ENST00000569919 CYP27C1Q4G0S4 372 aa7.3□□□□□ -1.24
UBFD1-209ENST00000569919 RNF43Q68DV7 783 aa7.3□□□□□ -1.24
UBFD1-209ENST00000569919 ZNF662Q6ZS27 426 aa7.3□□□□□ -1.24
UBFD1-209ENST00000569919 ZNF765Q7L2R6 523 aa7.3□□□□□ -1.24
UBFD1-209ENST00000569919 DZIP1Q86YF9 867 aaKnown RBP7.3□□□□□ -1.24
UBFD1-209ENST00000569919 LRRN4CLQ8ND94 238 aa7.3□□□□□ -1.24
UBFD1-209ENST00000569919 SGSM3Q96HU1 749 aa7.3□□□□□ -1.24
UBFD1-209ENST00000569919 Q96M66 194 aa7.3□□□□□ -1.24
UBFD1-209ENST00000569919 LGR4Q9BXB1 951 aa7.3□□□□□ -1.24
UBFD1-209ENST00000569919 C1QTNF1Q9BXJ1 281 aa7.3□□□□□ -1.24
UBFD1-209ENST00000569919 PRDM14Q9GZV8 571 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms