RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 SP7Q8TDD2 431 aaPredicted RBP12.37□□□□□ -0.43
SHCBP1-207ENST00000569702 SUCLA2Q9P2R7 463 aaPredicted RBP12.37□□□□□ -0.43
SHCBP1-207ENST00000569702 GAS2O43903 313 aaKnown RBP12.36□□□□□ -0.43
SHCBP1-207ENST00000569702 MGEA5O60502 916 aa12.36□□□□□ -0.43
SHCBP1-207ENST00000569702 DARSP14868 501 aaKnown RBP12.36□□□□□ -0.43
SHCBP1-207ENST00000569702 MUTP22033 750 aa12.36□□□□□ -0.43
SHCBP1-207ENST00000569702 RARRES1P49788 294 aa12.36□□□□□ -0.43
SHCBP1-207ENST00000569702 POLGP54098 1239 aaPredicted RBP12.36□□□□□ -0.43
SHCBP1-207ENST00000569702 NFX1Q12986 1120 aaKnown RBP12.36□□□□□ -0.43
SHCBP1-207ENST00000569702 FAM117BQ6P1L5 589 aa12.36□□□□□ -0.43
SHCBP1-207ENST00000569702 ZNF410Q86VK4 478 aa12.36□□□□□ -0.43
SHCBP1-207ENST00000569702 PIGOQ8TEQ8 1089 aa12.36□□□□□ -0.43
SHCBP1-207ENST00000569702 MYLIPQ8WY64 445 aa12.36□□□□□ -0.43
SHCBP1-207ENST00000569702 ZNF668Q96K58 619 aaPredicted RBP12.36□□□□□ -0.43
SHCBP1-207ENST00000569702 XPNPEP1Q9NQW7 623 aa12.36□□□□□ -0.43
SHCBP1-207ENST00000569702 LRWD1Q9UFC0 647 aa12.36□□□□□ -0.43
SHCBP1-207ENST00000569702 A0A087WWV3 80 aa12.35□□□□□ -0.43
SHCBP1-207ENST00000569702 A0A087WZ62 844 aa12.35□□□□□ -0.43
SHCBP1-207ENST00000569702 LINC01553A4QN01 128 aa12.35□□□□□ -0.43
SHCBP1-207ENST00000569702 VPS37CA5D8V6 355 aaPredicted RBP12.35□□□□□ -0.43
SHCBP1-207ENST00000569702 DGAT1O75907 488 aa12.35□□□□□ -0.43
SHCBP1-207ENST00000569702 UPP2O95045 317 aa12.35□□□□□ -0.43
SHCBP1-207ENST00000569702 DSC3Q14574 896 aa12.35□□□□□ -0.43
SHCBP1-207ENST00000569702 EMC2Q15006 297 aa12.35□□□□□ -0.43
SHCBP1-207ENST00000569702 ECM1Q16610 540 aa12.35□□□□□ -0.43
SHCBP1-207ENST00000569702 ARL6IP4Q66PJ3 421 aaKnown RBP12.35□□□□□ -0.43
SHCBP1-207ENST00000569702 HAUS3Q68CZ6 603 aa12.35□□□□□ -0.43
SHCBP1-207ENST00000569702 POTEGQ6S5H5 508 aa12.35□□□□□ -0.43
SHCBP1-207ENST00000569702 DTHD1Q6ZMT9 781 aa12.35□□□□□ -0.43
SHCBP1-207ENST00000569702 SPRED2Q7Z698 418 aa12.35□□□□□ -0.43
SHCBP1-207ENST00000569702 RHPN2Q8IUC4 686 aa12.35□□□□□ -0.43
SHCBP1-207ENST00000569702 KSR1Q8IVT5 923 aa12.35□□□□□ -0.43
SHCBP1-207ENST00000569702 TCP11Q8WWU5 503 aa12.35□□□□□ -0.43
SHCBP1-207ENST00000569702 PRPF31Q8WWY3 499 aaKnown RBP12.35□□□□□ -0.43
SHCBP1-207ENST00000569702 NLRP7Q8WX94 980 aa12.35□□□□□ -0.43
SHCBP1-207ENST00000569702 TMEM143Q96AN5 459 aa12.35□□□□□ -0.43
SHCBP1-207ENST00000569702 NACC1Q96RE7 527 aa12.35□□□□□ -0.43
SHCBP1-207ENST00000569702 FDXACB1Q9BRP7 624 aaPredicted RBP12.35□□□□□ -0.43
SHCBP1-207ENST00000569702 GCOM2Q9BZD3 368 aaPredicted RBP12.35□□□□□ -0.43
SHCBP1-207ENST00000569702 RAB34Q9BZG1 259 aa12.35□□□□□ -0.43
SHCBP1-207ENST00000569702 PRDM12Q9H4Q4 367 aa12.35□□□□□ -0.43
SHCBP1-207ENST00000569702 RC3H2Q9HBD1 1191 aaKnown RBP12.35□□□□□ -0.43
SHCBP1-207ENST00000569702 IFT122Q9HBG6 1241 aa12.35□□□□□ -0.43
SHCBP1-207ENST00000569702 RGS18Q9NS28 235 aa12.35□□□□□ -0.43
SHCBP1-207ENST00000569702 DBR1Q9UK59 544 aaKnown RBP12.35□□□□□ -0.43
SHCBP1-207ENST00000569702 COL4A3BPQ9Y5P4 624 aa12.35□□□□□ -0.43
SHCBP1-207ENST00000569702 STK24Q9Y6E0 443 aa12.35□□□□□ -0.43
SHCBP1-207ENST00000569702 COL4A6Q14031 1691 aa12.35□□□□□ -0.43
SHCBP1-207ENST00000569702 ARID2Q68CP9 1835 aa12.34□□□□□ -0.43
SHCBP1-207ENST00000569702 C9IYK1 514 aa12.34□□□□□ -0.43
SHCBP1-207ENST00000569702 ASAP2O43150 1006 aa12.34□□□□□ -0.43
SHCBP1-207ENST00000569702 CSDE1O75534 798 aaKnown RBP12.34□□□□□ -0.43
SHCBP1-207ENST00000569702 DGKIO75912 1065 aa12.34□□□□□ -0.43
SHCBP1-207ENST00000569702 SARSP49591 514 aaKnown RBP12.34□□□□□ -0.43
SHCBP1-207ENST00000569702 ERVK-21P61565 698 aa12.34□□□□□ -0.43
SHCBP1-207ENST00000569702 FAM189BP81408 668 aa12.34□□□□□ -0.43
SHCBP1-207ENST00000569702 LAMTOR4Q0VGL1 99 aa12.34□□□□□ -0.43
SHCBP1-207ENST00000569702 SLC24A5Q71RS6 500 aa12.34□□□□□ -0.43
SHCBP1-207ENST00000569702 FERMT3Q86UX7 667 aa12.34□□□□□ -0.43
SHCBP1-207ENST00000569702 NPAS4Q8IUM7 802 aa12.34□□□□□ -0.43
SHCBP1-207ENST00000569702 HSCBQ8IWL3 235 aa12.34□□□□□ -0.43
SHCBP1-207ENST00000569702 PSPC1Q8WXF1 523 aaKnown RBP12.34□□□□□ -0.43
SHCBP1-207ENST00000569702 ZNF689Q96CS4 500 aaPredicted RBP12.34□□□□□ -0.43
SHCBP1-207ENST00000569702 YME1L1Q96TA2 773 aa12.34□□□□□ -0.43
SHCBP1-207ENST00000569702 MTRQ99707 1265 aa12.34□□□□□ -0.43
SHCBP1-207ENST00000569702 ADAM2Q99965 735 aa12.34□□□□□ -0.43
SHCBP1-207ENST00000569702 ATP6V0A4Q9HBG4 840 aa12.34□□□□□ -0.43
SHCBP1-207ENST00000569702 C1orf112Q9NSG2 853 aa12.34□□□□□ -0.43
SHCBP1-207ENST00000569702 BMP2KQ9NSY1 1161 aaPredicted RBP12.34□□□□□ -0.43
SHCBP1-207ENST00000569702 FOXD4L1Q9NU39 408 aa12.34□□□□□ -0.43
SHCBP1-207ENST00000569702 MTMR6Q9Y217 621 aa12.34□□□□□ -0.43
SHCBP1-207ENST00000569702 DENND3A2RUS2 1198 aa12.33□□□□□ -0.44
SHCBP1-207ENST00000569702 EPOPA6NHQ4 379 aa12.33□□□□□ -0.44
SHCBP1-207ENST00000569702 PP2D1A8MPX8 630 aa12.33□□□□□ -0.44
SHCBP1-207ENST00000569702 ARL2P36404 184 aa12.33□□□□□ -0.44
SHCBP1-207ENST00000569702 CCT6AP40227 531 aaKnown RBP12.33□□□□□ -0.44
SHCBP1-207ENST00000569702 POU5F1BQ06416 359 aa12.33□□□□□ -0.44
SHCBP1-207ENST00000569702 RESTQ13127 1097 aa12.33□□□□□ -0.44
SHCBP1-207ENST00000569702 ADGRE1Q14246 886 aa12.33□□□□□ -0.44
SHCBP1-207ENST00000569702 MXD4Q14582 209 aaPredicted RBP12.33□□□□□ -0.44
SHCBP1-207ENST00000569702 SNX29Q8TEQ0 813 aa12.33□□□□□ -0.44
SHCBP1-207ENST00000569702 NLRP4Q96MN2 994 aa12.33□□□□□ -0.44
SHCBP1-207ENST00000569702 SCLT1Q96NL6 688 aa12.33□□□□□ -0.44
SHCBP1-207ENST00000569702 TGS1Q96RS0 853 aaKnown RBP12.33□□□□□ -0.44
SHCBP1-207ENST00000569702 MMTAG2Q9BU76 263 aaKnown RBP12.33□□□□□ -0.44
SHCBP1-207ENST00000569702 INO80BQ9C086 356 aaPredicted RBP12.33□□□□□ -0.44
SHCBP1-207ENST00000569702 CERS4Q9HA82 394 aa12.33□□□□□ -0.44
SHCBP1-207ENST00000569702 A0A0C4DFX4 3053 aa12.33□□□□□ -0.44
SHCBP1-207ENST00000569702 REV3LO60673 3130 aa12.33□□□□□ -0.44
SHCBP1-207ENST00000569702 STX6O43752 255 aa12.32□□□□□ -0.44
SHCBP1-207ENST00000569702 BMP15O95972 392 aa12.32□□□□□ -0.44
SHCBP1-207ENST00000569702 LINC00271P0C7V0 271 aa12.32□□□□□ -0.44
SHCBP1-207ENST00000569702 STAG3L1P0CL83 205 aa12.32□□□□□ -0.44
SHCBP1-207ENST00000569702 SRGAP2CP0DJJ0 459 aa12.32□□□□□ -0.44
SHCBP1-207ENST00000569702 FOSL2P15408 326 aa12.32□□□□□ -0.44
SHCBP1-207ENST00000569702 POU3F3P20264 500 aaPredicted RBP12.32□□□□□ -0.44
SHCBP1-207ENST00000569702 FGFR4P22455 802 aa12.32□□□□□ -0.44
SHCBP1-207ENST00000569702 CDC25AP30304 524 aa12.32□□□□□ -0.44
SHCBP1-207ENST00000569702 SF3A1Q15459 793 aaKnown RBP12.32□□□□□ -0.44
SHCBP1-207ENST00000569702 KRT79Q5XKE5 535 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms