RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 GPR32O75388 356 aa10.95□□□□□ -0.66
CLN6-209ENST00000569336 DGAT1O75907 488 aa10.95□□□□□ -0.66
CLN6-209ENST00000569336 SLITRK3O94933 977 aa10.95□□□□□ -0.66
CLN6-209ENST00000569336 XRCC6P12956 609 aaKnown RBP eCLIP10.95□□□□□ -0.66
CLN6-209ENST00000569336 PDIA4P13667 645 aaKnown RBP10.95□□□□□ -0.66
CLN6-209ENST00000569336 SFPQP23246 707 aaKnown RBP eCLIP10.95□□□□□ -0.66
CLN6-209ENST00000569336 EIF4BP23588 611 aaKnown RBP10.95□□□□□ -0.66
CLN6-209ENST00000569336 RPA1P27694 616 aa10.95□□□□□ -0.66
CLN6-209ENST00000569336 TOB1P50616 345 aaPredicted RBP10.95□□□□□ -0.66
CLN6-209ENST00000569336 NFX1Q12986 1120 aaKnown RBP10.95□□□□□ -0.66
CLN6-209ENST00000569336 PDIA5Q14554 519 aa10.95□□□□□ -0.66
CLN6-209ENST00000569336 NBR1Q14596 966 aa10.95□□□□□ -0.66
CLN6-209ENST00000569336 ARL6IP4Q66PJ3 421 aaKnown RBP10.95□□□□□ -0.66
CLN6-209ENST00000569336 DTHD1Q6ZMT9 781 aa10.95□□□□□ -0.66
CLN6-209ENST00000569336 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.95□□□□□ -0.66
CLN6-209ENST00000569336 MAFAQ8NHW3 353 aaPredicted RBP10.95□□□□□ -0.66
CLN6-209ENST00000569336 PSPC1Q8WXF1 523 aaKnown RBP10.95□□□□□ -0.66
CLN6-209ENST00000569336 TOP1MTQ969P6 601 aa10.95□□□□□ -0.66
CLN6-209ENST00000569336 CEP89Q96ST8 783 aa10.95□□□□□ -0.66
CLN6-209ENST00000569336 PPP1R16BQ96T49 567 aa10.95□□□□□ -0.66
CLN6-209ENST00000569336 YME1L1Q96TA2 773 aa10.95□□□□□ -0.66
CLN6-209ENST00000569336 GAS2L1Q99501 681 aaPredicted RBP10.95□□□□□ -0.66
CLN6-209ENST00000569336 MTRQ99707 1265 aa10.95□□□□□ -0.66
CLN6-209ENST00000569336 GCOM2Q9BZD3 368 aaPredicted RBP10.95□□□□□ -0.66
CLN6-209ENST00000569336 INO80BQ9C086 356 aaPredicted RBP10.95□□□□□ -0.66
CLN6-209ENST00000569336 TSPYL2Q9H2G4 693 aaPredicted RBP10.95□□□□□ -0.66
CLN6-209ENST00000569336 DHX33Q9H6R0 707 aaKnown RBP10.95□□□□□ -0.66
CLN6-209ENST00000569336 AGO3Q9H9G7 860 aaKnown RBP10.95□□□□□ -0.66
CLN6-209ENST00000569336 ATP6V0A4Q9HBG4 840 aa10.95□□□□□ -0.66
CLN6-209ENST00000569336 C1orf112Q9NSG2 853 aa10.95□□□□□ -0.66
CLN6-209ENST00000569336 WRAP73Q9P2S5 460 aaPredicted RBP10.95□□□□□ -0.66
CLN6-209ENST00000569336 LRWD1Q9UFC0 647 aa10.95□□□□□ -0.66
CLN6-209ENST00000569336 ANK1P16157 1881 aa10.95□□□□□ -0.66
CLN6-209ENST00000569336 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.94□□□□□ -0.66
CLN6-209ENST00000569336 TNFRSF10AO00220 468 aa10.94□□□□□ -0.66
CLN6-209ENST00000569336 ASAP2O43150 1006 aa10.94□□□□□ -0.66
CLN6-209ENST00000569336 STAG3L1P0CL83 205 aa10.94□□□□□ -0.66
CLN6-209ENST00000569336 FOSL2P15408 326 aa10.94□□□□□ -0.66
CLN6-209ENST00000569336 SYT1P21579 422 aa10.94□□□□□ -0.66
CLN6-209ENST00000569336 NPEPPSP55786 919 aa10.94□□□□□ -0.66
CLN6-209ENST00000569336 HTRA4P83105 476 aaPredicted RBP10.94□□□□□ -0.66
CLN6-209ENST00000569336 ATP2C1P98194 919 aaPredicted RBP10.94□□□□□ -0.66
CLN6-209ENST00000569336 MXD4Q14582 209 aaPredicted RBP10.94□□□□□ -0.66
CLN6-209ENST00000569336 KRT79Q5XKE5 535 aa10.94□□□□□ -0.66
CLN6-209ENST00000569336 RHPN2Q8IUC4 686 aa10.94□□□□□ -0.66
CLN6-209ENST00000569336 NPAS4Q8IUM7 802 aa10.94□□□□□ -0.66
CLN6-209ENST00000569336 IGSF22Q8N9C0 903 aa10.94□□□□□ -0.66
CLN6-209ENST00000569336 SNX29Q8TEQ0 813 aa10.94□□□□□ -0.66
CLN6-209ENST00000569336 TMEM40Q8WWA1 233 aa10.94□□□□□ -0.66
CLN6-209ENST00000569336 NACC1Q96RE7 527 aa10.94□□□□□ -0.66
CLN6-209ENST00000569336 SH2D3AQ9BRG2 576 aa10.94□□□□□ -0.66
CLN6-209ENST00000569336 OSBPL7Q9BZF2 842 aa10.94□□□□□ -0.66
CLN6-209ENST00000569336 ERVK-5Q9HDB9 667 aa10.94□□□□□ -0.66
CLN6-209ENST00000569336 SUCLA2Q9P2R7 463 aaPredicted RBP10.94□□□□□ -0.66
CLN6-209ENST00000569336 DBR1Q9UK59 544 aaKnown RBP10.94□□□□□ -0.66
CLN6-209ENST00000569336 ST3GAL5Q9UNP4 418 aa10.94□□□□□ -0.66
CLN6-209ENST00000569336 NOC2LQ9Y3T9 749 aaKnown RBP10.94□□□□□ -0.66
CLN6-209ENST00000569336 COL4A3BPQ9Y5P4 624 aa10.94□□□□□ -0.66
CLN6-209ENST00000569336 XIRP2A4UGR9 3374 aa10.93□□□□□ -0.66
CLN6-209ENST00000569336 ADGRA3Q8IWK6 1321 aa10.93□□□□□ -0.66
CLN6-209ENST00000569336 UPP2O95045 317 aa10.93□□□□□ -0.66
CLN6-209ENST00000569336 DARSP14868 501 aaKnown RBP10.93□□□□□ -0.66
CLN6-209ENST00000569336 MYOGP15173 224 aa10.93□□□□□ -0.66
CLN6-209ENST00000569336 ZSCAN20P17040 1043 aaPredicted RBP10.93□□□□□ -0.66
CLN6-209ENST00000569336 CCT6AP40227 531 aaKnown RBP10.93□□□□□ -0.66
CLN6-209ENST00000569336 PHKA2P46019 1235 aa10.93□□□□□ -0.66
CLN6-209ENST00000569336 RARRES1P49788 294 aa10.93□□□□□ -0.66
CLN6-209ENST00000569336 TAP1Q03518 808 aa10.93□□□□□ -0.66
CLN6-209ENST00000569336 TFDP1Q14186 410 aa10.93□□□□□ -0.66
CLN6-209ENST00000569336 FAM117BQ6P1L5 589 aa10.93□□□□□ -0.66
CLN6-209ENST00000569336 POTEGQ6S5H5 508 aa10.93□□□□□ -0.66
CLN6-209ENST00000569336 TMCO2Q7Z6W1 182 aaPredicted RBP10.93□□□□□ -0.66
CLN6-209ENST00000569336 FAM228AQ86W67 206 aa10.93□□□□□ -0.66
CLN6-209ENST00000569336 CATSPER3Q86XQ3 398 aa10.93□□□□□ -0.66
CLN6-209ENST00000569336 C4orf32Q8N8J7 132 aa10.93□□□□□ -0.66
CLN6-209ENST00000569336 MCPH1Q8NEM0 835 aa10.93□□□□□ -0.66
CLN6-209ENST00000569336 SP7Q8TDD2 431 aaPredicted RBP10.93□□□□□ -0.66
CLN6-209ENST00000569336 NLRP4Q96MN2 994 aa10.93□□□□□ -0.66
CLN6-209ENST00000569336 SAMD11Q96NU1 681 aa10.93□□□□□ -0.66
CLN6-209ENST00000569336 CDX2Q99626 313 aaPredicted RBP10.93□□□□□ -0.66
CLN6-209ENST00000569336 ADAMTS10Q9H324 1103 aa10.93□□□□□ -0.66
CLN6-209ENST00000569336 DACT1Q9NYF0 836 aa10.93□□□□□ -0.66
CLN6-209ENST00000569336 LRFN2Q9ULH4 789 aa10.93□□□□□ -0.66
CLN6-209ENST00000569336 RWDD3Q9Y3V2 267 aa10.93□□□□□ -0.66
CLN6-209ENST00000569336 MTCL1Q9Y4B5 1905 aaKnown RBP10.93□□□□□ -0.66
CLN6-209ENST00000569336 A0A087WZ62 844 aa10.92□□□□□ -0.66
CLN6-209ENST00000569336 ARHGEF35A5YM69 484 aa10.92□□□□□ -0.66
CLN6-209ENST00000569336 ENPP3O14638 875 aa10.92□□□□□ -0.66
CLN6-209ENST00000569336 SLC26A4O43511 780 aa10.92□□□□□ -0.66
CLN6-209ENST00000569336 STX6O43752 255 aa10.92□□□□□ -0.66
CLN6-209ENST00000569336 MED24O75448 989 aa10.92□□□□□ -0.66
CLN6-209ENST00000569336 SPATA31C1P0DKV0 1188 aa10.92□□□□□ -0.66
CLN6-209ENST00000569336 SARSP49591 514 aaKnown RBP10.92□□□□□ -0.66
CLN6-209ENST00000569336 LAMTOR4Q0VGL1 99 aa10.92□□□□□ -0.66
CLN6-209ENST00000569336 DRP2Q13474 957 aa10.92□□□□□ -0.66
CLN6-209ENST00000569336 GRIN2CQ14957 1233 aa10.92□□□□□ -0.66
CLN6-209ENST00000569336 PCBP1Q15365 356 aaKnown RBP eCLIP10.92□□□□□ -0.66
CLN6-209ENST00000569336 SLC24A5Q71RS6 500 aa10.92□□□□□ -0.66
CLN6-209ENST00000569336 FERMT3Q86UX7 667 aa10.92□□□□□ -0.66
CLN6-209ENST00000569336 KCTD17Q8N5Z5 321 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms