RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 FAM178BQ8IXR5 827 aa10.67□□□□□ -0.7
SF3B3-211ENST00000568291 TMEM192Q8IY95 271 aa10.67□□□□□ -0.7
SF3B3-211ENST00000568291 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.67□□□□□ -0.7
SF3B3-211ENST00000568291 LINC01599Q8WXQ3 324 aa10.67□□□□□ -0.7
SF3B3-211ENST00000568291 TNPO1Q92973 898 aaKnown RBP10.67□□□□□ -0.7
SF3B3-211ENST00000568291 TOP1MTQ969P6 601 aa10.67□□□□□ -0.7
SF3B3-211ENST00000568291 FAM20AQ96MK3 541 aa10.67□□□□□ -0.7
SF3B3-211ENST00000568291 OSMRQ99650 979 aa10.67□□□□□ -0.7
SF3B3-211ENST00000568291 TTC12Q9H892 705 aaPredicted RBP10.67□□□□□ -0.7
SF3B3-211ENST00000568291 PADI3Q9ULW8 664 aa10.67□□□□□ -0.7
SF3B3-211ENST00000568291 AKT3Q9Y243 479 aa10.67□□□□□ -0.7
SF3B3-211ENST00000568291 NOC2LQ9Y3T9 749 aaKnown RBP10.67□□□□□ -0.7
SF3B3-211ENST00000568291 TRPV2Q9Y5S1 764 aa10.67□□□□□ -0.7
SF3B3-211ENST00000568291 ADGRA3Q8IWK6 1321 aa10.66□□□□□ -0.7
SF3B3-211ENST00000568291 POTEMA6NI47 508 aa10.66□□□□□ -0.7
SF3B3-211ENST00000568291 PI4K2BG5E9Z4 385 aa10.66□□□□□ -0.7
SF3B3-211ENST00000568291 H3BNC9 293 aa10.66□□□□□ -0.7
SF3B3-211ENST00000568291 H3BQ06 376 aaPredicted RBP10.66□□□□□ -0.7
SF3B3-211ENST00000568291 M0QZ92 97 aa10.66□□□□□ -0.7
SF3B3-211ENST00000568291 MGEA5O60502 916 aa10.66□□□□□ -0.7
SF3B3-211ENST00000568291 NEMFO60524 1076 aa10.66□□□□□ -0.7
SF3B3-211ENST00000568291 GPR37L1O60883 481 aa10.66□□□□□ -0.7
SF3B3-211ENST00000568291 GPR32O75388 356 aa10.66□□□□□ -0.7
SF3B3-211ENST00000568291 BAG4O95429 457 aaKnown RBP10.66□□□□□ -0.7
SF3B3-211ENST00000568291 TOB1P50616 345 aaPredicted RBP10.66□□□□□ -0.7
SF3B3-211ENST00000568291 NLRP11P59045 1033 aaKnown RBP10.66□□□□□ -0.7
SF3B3-211ENST00000568291 PSMC5P62195 406 aa10.66□□□□□ -0.7
SF3B3-211ENST00000568291 TARBP2Q15633 366 aaKnown RBP10.66□□□□□ -0.7
SF3B3-211ENST00000568291 EP400NLQ6ZTU2 488 aa10.66□□□□□ -0.7
SF3B3-211ENST00000568291 NOSTRINQ8IVI9 506 aa10.66□□□□□ -0.7
SF3B3-211ENST00000568291 KSR1Q8IVT5 923 aa10.66□□□□□ -0.7
SF3B3-211ENST00000568291 GJD3Q8N144 294 aa10.66□□□□□ -0.7
SF3B3-211ENST00000568291 MTMR9Q96QG7 549 aa10.66□□□□□ -0.7
SF3B3-211ENST00000568291 CEP89Q96ST8 783 aa10.66□□□□□ -0.7
SF3B3-211ENST00000568291 TMX1Q9H3N1 280 aa10.66□□□□□ -0.7
SF3B3-211ENST00000568291 NSUN3Q9H649 340 aaKnown RBP10.66□□□□□ -0.7
SF3B3-211ENST00000568291 PCDHA12Q9UN75 941 aa10.66□□□□□ -0.7
SF3B3-211ENST00000568291 PIEZO1Q92508 2521 aa10.66□□□□□ -0.7
SF3B3-211ENST00000568291 PLXNA4Q9HCM2 1894 aa10.66□□□□□ -0.7
SF3B3-211ENST00000568291 EVPLQ92817 2033 aa10.65□□□□□ -0.7
SF3B3-211ENST00000568291 MYH9P35579 1960 aaKnown RBP10.65□□□□□ -0.7
SF3B3-211ENST00000568291 WDR81Q562E7 1941 aa10.65□□□□□ -0.7
SF3B3-211ENST00000568291 TBX3O15119 743 aa10.65□□□□□ -0.7
SF3B3-211ENST00000568291 SLITRK3O94933 977 aa10.65□□□□□ -0.7
SF3B3-211ENST00000568291 TECP42680 631 aa10.65□□□□□ -0.7
SF3B3-211ENST00000568291 QARSP47897 775 aaKnown RBP10.65□□□□□ -0.7
SF3B3-211ENST00000568291 GATMP50440 423 aa10.65□□□□□ -0.7
SF3B3-211ENST00000568291 TBC1D8BQ0IIM8 1120 aa10.65□□□□□ -0.7
SF3B3-211ENST00000568291 PAK2Q13177 524 aa10.65□□□□□ -0.7
SF3B3-211ENST00000568291 EPHA7Q15375 998 aa10.65□□□□□ -0.7
SF3B3-211ENST00000568291 PUS10Q3MIT2 529 aaKnown RBP10.65□□□□□ -0.7
SF3B3-211ENST00000568291 XKR3Q5GH77 459 aa10.65□□□□□ -0.7
SF3B3-211ENST00000568291 TTC38Q5R3I4 469 aa10.65□□□□□ -0.7
SF3B3-211ENST00000568291 TSHZ1Q6ZSZ6 1077 aa10.65□□□□□ -0.7
SF3B3-211ENST00000568291 NME8Q8N427 588 aa10.65□□□□□ -0.7
SF3B3-211ENST00000568291 FIBCD1Q8N539 461 aa10.65□□□□□ -0.7
SF3B3-211ENST00000568291 LINC01465Q8N7H1 131 aa10.65□□□□□ -0.7
SF3B3-211ENST00000568291 RDM1Q8NG50 284 aa10.65□□□□□ -0.7
SF3B3-211ENST00000568291 NEK9Q8TD19 979 aa10.65□□□□□ -0.7
SF3B3-211ENST00000568291 PIGOQ8TEQ8 1089 aa10.65□□□□□ -0.7
SF3B3-211ENST00000568291 TMEM143Q96AN5 459 aa10.65□□□□□ -0.7
SF3B3-211ENST00000568291 FAM167AQ96KS9 214 aa10.65□□□□□ -0.7
SF3B3-211ENST00000568291 NAP1L4Q99733 375 aaKnown RBP10.65□□□□□ -0.7
SF3B3-211ENST00000568291 EIF2AK1Q9BQI3 630 aaKnown RBP10.65□□□□□ -0.7
SF3B3-211ENST00000568291 LXNQ9BS40 222 aa10.65□□□□□ -0.7
SF3B3-211ENST00000568291 NIFKQ9BYG3 293 aaKnown RBP10.65□□□□□ -0.7
SF3B3-211ENST00000568291 FOXP1Q9H334 677 aaPredicted RBP10.65□□□□□ -0.7
SF3B3-211ENST00000568291 POLD4Q9HCU8 107 aa10.65□□□□□ -0.7
SF3B3-211ENST00000568291 ST3GAL5Q9UNP4 418 aa10.65□□□□□ -0.7
SF3B3-211ENST00000568291 SMC3Q9UQE7 1217 aa10.65□□□□□ -0.7
SF3B3-211ENST00000568291 ARIH1Q9Y4X5 557 aaPredicted RBP10.65□□□□□ -0.7
SF3B3-211ENST00000568291 PCDHB6Q9Y5E3 794 aa10.65□□□□□ -0.7
SF3B3-211ENST00000568291 ZNF318Q5VUA4 2279 aa10.65□□□□□ -0.7
SF3B3-211ENST00000568291 COL1A2P08123 1366 aa10.65□□□□□ -0.71
SF3B3-211ENST00000568291 FNDC1Q4ZHG4 1894 aaPredicted RBP10.64□□□□□ -0.71
SF3B3-211ENST00000568291 GRXCR2A6NFK2 248 aa10.64□□□□□ -0.71
SF3B3-211ENST00000568291 RPS6KA5O75582 802 aa10.64□□□□□ -0.71
SF3B3-211ENST00000568291 CSPG5O95196 566 aa10.64□□□□□ -0.71
SF3B3-211ENST00000568291 P4HBP07237 508 aaKnown RBP10.64□□□□□ -0.71
SF3B3-211ENST00000568291 COL19A1Q14993 1142 aa10.64□□□□□ -0.71
SF3B3-211ENST00000568291 XKR9Q5GH70 373 aa10.64□□□□□ -0.71
SF3B3-211ENST00000568291 SLFN12Q8IYM2 578 aa10.64□□□□□ -0.71
SF3B3-211ENST00000568291 C4orf32Q8N8J7 132 aa10.64□□□□□ -0.71
SF3B3-211ENST00000568291 PABPC5Q96DU9 382 aaKnown RBP10.64□□□□□ -0.71
SF3B3-211ENST00000568291 CEP170P1Q96L14 293 aa10.64□□□□□ -0.71
SF3B3-211ENST00000568291 SCLT1Q96NL6 688 aa10.64□□□□□ -0.71
SF3B3-211ENST00000568291 C11orf84Q9BUA3 381 aaPredicted RBP10.64□□□□□ -0.71
SF3B3-211ENST00000568291 ADAMTS10Q9H324 1103 aa10.64□□□□□ -0.71
SF3B3-211ENST00000568291 RC3H2Q9HBD1 1191 aaKnown RBP10.64□□□□□ -0.71
SF3B3-211ENST00000568291 CYP26B1Q9NR63 512 aa10.64□□□□□ -0.71
SF3B3-211ENST00000568291 CLDND1Q9NY35 253 aa10.64□□□□□ -0.71
SF3B3-211ENST00000568291 SUCLA2Q9P2R7 463 aaPredicted RBP10.64□□□□□ -0.71
SF3B3-211ENST00000568291 CEP131Q9UPN4 1083 aa10.64□□□□□ -0.71
SF3B3-211ENST00000568291 FAM50BQ9Y247 325 aa10.64□□□□□ -0.71
SF3B3-211ENST00000568291 RWDD3Q9Y3V2 267 aa10.64□□□□□ -0.71
SF3B3-211ENST00000568291 A0A087WZ62 844 aa10.63□□□□□ -0.71
SF3B3-211ENST00000568291 PP2D1A8MPX8 630 aa10.63□□□□□ -0.71
SF3B3-211ENST00000568291 C5orf67F2Z3F1 127 aa10.63□□□□□ -0.71
SF3B3-211ENST00000568291 H3BQV1 296 aa10.63□□□□□ -0.71
SF3B3-211ENST00000568291 MAGEB2O15479 319 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms