RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 NCAPH2Q6IBW4 605 aa9.16□□□□□ -0.94
HDGFL3-205ENST00000568129 SLC24A5Q71RS6 500 aa9.16□□□□□ -0.94
HDGFL3-205ENST00000568129 SPRED2Q7Z698 418 aa9.16□□□□□ -0.94
HDGFL3-205ENST00000568129 CATSPER3Q86XQ3 398 aa9.16□□□□□ -0.94
HDGFL3-205ENST00000568129 IFNLR1Q8IU57 520 aaPredicted RBP9.16□□□□□ -0.94
HDGFL3-205ENST00000568129 NPAS4Q8IUM7 802 aa9.16□□□□□ -0.94
HDGFL3-205ENST00000568129 LRRC71Q8N4P6 559 aa9.16□□□□□ -0.94
HDGFL3-205ENST00000568129 IGSF22Q8N9C0 903 aa9.16□□□□□ -0.94
HDGFL3-205ENST00000568129 MAFAQ8NHW3 353 aaPredicted RBP9.16□□□□□ -0.94
HDGFL3-205ENST00000568129 INTS4Q96HW7 963 aaKnown RBP9.16□□□□□ -0.94
HDGFL3-205ENST00000568129 TGS1Q96RS0 853 aaKnown RBP9.16□□□□□ -0.94
HDGFL3-205ENST00000568129 MAP7D2Q96T17 732 aa9.16□□□□□ -0.94
HDGFL3-205ENST00000568129 GAS2L1Q99501 681 aaPredicted RBP9.16□□□□□ -0.94
HDGFL3-205ENST00000568129 OSMRQ99650 979 aa9.16□□□□□ -0.94
HDGFL3-205ENST00000568129 ZBED2Q9BTP6 218 aa9.16□□□□□ -0.94
HDGFL3-205ENST00000568129 IFT122Q9HBG6 1241 aa9.16□□□□□ -0.94
HDGFL3-205ENST00000568129 CHST12Q9NRB3 414 aa9.16□□□□□ -0.94
HDGFL3-205ENST00000568129 RNF216Q9NWF9 866 aaPredicted RBP9.16□□□□□ -0.94
HDGFL3-205ENST00000568129 SEPT9Q9UHD8 586 aaPredicted RBP9.16□□□□□ -0.94
HDGFL3-205ENST00000568129 DBR1Q9UK59 544 aaKnown RBP9.16□□□□□ -0.94
HDGFL3-205ENST00000568129 MTCH2Q9Y6C9 303 aa9.16□□□□□ -0.94
HDGFL3-205ENST00000568129 PLXNA4Q9HCM2 1894 aa9.16□□□□□ -0.94
HDGFL3-205ENST00000568129 SPTBN5Q9NRC6 3674 aaKnown RBP9.16□□□□□ -0.94
HDGFL3-205ENST00000568129 TRIP11Q15643 1979 aa9.15□□□□□ -0.94
HDGFL3-205ENST00000568129 ZBTB39O15060 712 aa9.15□□□□□ -0.94
HDGFL3-205ENST00000568129 MARCH6O60337 910 aa9.15□□□□□ -0.94
HDGFL3-205ENST00000568129 OR52Z1P0C646 297 aa9.15□□□□□ -0.94
HDGFL3-205ENST00000568129 ARL2P36404 184 aa9.15□□□□□ -0.94
HDGFL3-205ENST00000568129 RARRES1P49788 294 aa9.15□□□□□ -0.94
HDGFL3-205ENST00000568129 DNM2P50570 870 aa9.15□□□□□ -0.94
HDGFL3-205ENST00000568129 FOSBP53539 338 aa9.15□□□□□ -0.94
HDGFL3-205ENST00000568129 GRB10Q13322 594 aa9.15□□□□□ -0.94
HDGFL3-205ENST00000568129 TMEM266Q2M3C6 531 aa9.15□□□□□ -0.94
HDGFL3-205ENST00000568129 RILPL1Q5EBL4 403 aa9.15□□□□□ -0.94
HDGFL3-205ENST00000568129 PLA2G4FQ68DD2 849 aa9.15□□□□□ -0.94
HDGFL3-205ENST00000568129 TRMT1LQ7Z2T5 733 aaKnown RBP9.15□□□□□ -0.94
HDGFL3-205ENST00000568129 TPH2Q8IWU9 490 aa9.15□□□□□ -0.94
HDGFL3-205ENST00000568129 CMTR2Q8IYT2 770 aaKnown RBP9.15□□□□□ -0.94
HDGFL3-205ENST00000568129 SNX21Q969T3 373 aa9.15□□□□□ -0.94
HDGFL3-205ENST00000568129 CEP170P1Q96L14 293 aa9.15□□□□□ -0.94
HDGFL3-205ENST00000568129 NFKBIZQ9BYH8 718 aa9.15□□□□□ -0.94
HDGFL3-205ENST00000568129 INO80BQ9C086 356 aaPredicted RBP9.15□□□□□ -0.94
HDGFL3-205ENST00000568129 XPNPEP1Q9NQW7 623 aa9.15□□□□□ -0.94
HDGFL3-205ENST00000568129 SUCLA2Q9P2R7 463 aaPredicted RBP9.15□□□□□ -0.94
HDGFL3-205ENST00000568129 NOL7Q9UMY1 257 aaKnown RBP9.15□□□□□ -0.94
HDGFL3-205ENST00000568129 AKT3Q9Y243 479 aa9.15□□□□□ -0.94
HDGFL3-205ENST00000568129 PCDHB6Q9Y5E3 794 aa9.15□□□□□ -0.94
HDGFL3-205ENST00000568129 GTF3C3Q9Y5Q9 886 aa9.15□□□□□ -0.94
HDGFL3-205ENST00000568129 STK24Q9Y6E0 443 aa9.15□□□□□ -0.94
HDGFL3-205ENST00000568129 A0A0C4DFX4 3053 aa9.15□□□□□ -0.95
HDGFL3-205ENST00000568129 ADGRA3Q8IWK6 1321 aa9.14□□□□□ -0.95
HDGFL3-205ENST00000568129 A0A087WZ62 844 aa9.14□□□□□ -0.95
HDGFL3-205ENST00000568129 A0A0U1RQF3 1178 aa9.14□□□□□ -0.95
HDGFL3-205ENST00000568129 POTEMA6NI47 508 aa9.14□□□□□ -0.95
HDGFL3-205ENST00000568129 H3BNC9 293 aa9.14□□□□□ -0.95
HDGFL3-205ENST00000568129 ZNF623O75123 536 aa9.14□□□□□ -0.95
HDGFL3-205ENST00000568129 MED24O75448 989 aa9.14□□□□□ -0.95
HDGFL3-205ENST00000568129 DGAT1O75907 488 aa9.14□□□□□ -0.95
HDGFL3-205ENST00000568129 EOMESO95936 686 aa9.14□□□□□ -0.95
HDGFL3-205ENST00000568129 STAG3L1P0CL83 205 aa9.14□□□□□ -0.95
HDGFL3-205ENST00000568129 BMPR1AP36894 532 aa9.14□□□□□ -0.95
HDGFL3-205ENST00000568129 TECP42680 631 aa9.14□□□□□ -0.95
HDGFL3-205ENST00000568129 CYP4A11Q02928 519 aa9.14□□□□□ -0.95
HDGFL3-205ENST00000568129 NFX1Q12986 1120 aaKnown RBP9.14□□□□□ -0.95
HDGFL3-205ENST00000568129 PTGDRQ13258 359 aa9.14□□□□□ -0.95
HDGFL3-205ENST00000568129 PCBP1Q15365 356 aaKnown RBP eCLIP9.14□□□□□ -0.95
HDGFL3-205ENST00000568129 IL17AQ16552 155 aa9.14□□□□□ -0.95
HDGFL3-205ENST00000568129 EPC2Q52LR7 807 aa9.14□□□□□ -0.95
HDGFL3-205ENST00000568129 NAALADL2Q58DX5 795 aa9.14□□□□□ -0.95
HDGFL3-205ENST00000568129 ARL6IP4Q66PJ3 421 aaKnown RBP9.14□□□□□ -0.95
HDGFL3-205ENST00000568129 SRGAP1Q7Z6B7 1085 aa9.14□□□□□ -0.95
HDGFL3-205ENST00000568129 ZNF598Q86UK7 904 aaKnown RBP9.14□□□□□ -0.95
HDGFL3-205ENST00000568129 FERMT3Q86UX7 667 aa9.14□□□□□ -0.95
HDGFL3-205ENST00000568129 TMEM192Q8IY95 271 aa9.14□□□□□ -0.95
HDGFL3-205ENST00000568129 KCTD17Q8N5Z5 321 aa9.14□□□□□ -0.95
HDGFL3-205ENST00000568129 TCP11Q8WWU5 503 aa9.14□□□□□ -0.95
HDGFL3-205ENST00000568129 PRPF31Q8WWY3 499 aaKnown RBP9.14□□□□□ -0.95
HDGFL3-205ENST00000568129 SLC7A3Q8WY07 619 aa9.14□□□□□ -0.95
HDGFL3-205ENST00000568129 RSPH1Q8WYR4 309 aa9.14□□□□□ -0.95
HDGFL3-205ENST00000568129 P2RX5Q93086 422 aa9.14□□□□□ -0.95
HDGFL3-205ENST00000568129 YME1L1Q96TA2 773 aa9.14□□□□□ -0.95
HDGFL3-205ENST00000568129 ADAM2Q99965 735 aa9.14□□□□□ -0.95
HDGFL3-205ENST00000568129 SH2D3AQ9BRG2 576 aa9.14□□□□□ -0.95
HDGFL3-205ENST00000568129 FDXACB1Q9BRP7 624 aaPredicted RBP9.14□□□□□ -0.95
HDGFL3-205ENST00000568129 PLVAPQ9BX97 442 aa9.14□□□□□ -0.95
HDGFL3-205ENST00000568129 GCOM2Q9BZD3 368 aaPredicted RBP9.14□□□□□ -0.95
HDGFL3-205ENST00000568129 RNF19AQ9NV58 838 aa9.14□□□□□ -0.95
HDGFL3-205ENST00000568129 TMEM161AQ9NX61 479 aa9.14□□□□□ -0.95
HDGFL3-205ENST00000568129 SMC3Q9UQE7 1217 aa9.14□□□□□ -0.95
HDGFL3-205ENST00000568129 RWDD3Q9Y3V2 267 aa9.14□□□□□ -0.95
HDGFL3-205ENST00000568129 TDRD15B5MCY1 1934 aaKnown RBP9.13□□□□□ -0.95
HDGFL3-205ENST00000568129 RFXAPO00287 272 aa9.13□□□□□ -0.95
HDGFL3-205ENST00000568129 UPP2O95045 317 aa9.13□□□□□ -0.95
HDGFL3-205ENST00000568129 ATP2B1P20020 1258 aa9.13□□□□□ -0.95
HDGFL3-205ENST00000568129 POLGP54098 1239 aaPredicted RBP9.13□□□□□ -0.95
HDGFL3-205ENST00000568129 PTENP60484 403 aa9.13□□□□□ -0.95
HDGFL3-205ENST00000568129 ATP2C1P98194 919 aaPredicted RBP9.13□□□□□ -0.95
HDGFL3-205ENST00000568129 LAMTOR4Q0VGL1 99 aa9.13□□□□□ -0.95
HDGFL3-205ENST00000568129 MXD4Q14582 209 aaPredicted RBP9.13□□□□□ -0.95
HDGFL3-205ENST00000568129 NBR1Q14596 966 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms