RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 GJA9P57773 515 aa5.43□□□□□ -1.54
HERPUD1-212ENST00000567944 ESPNLQ6ZVH7 1005 aa5.43□□□□□ -1.54
HERPUD1-212ENST00000567944 OTOP2Q7RTS6 562 aa5.43□□□□□ -1.54
HERPUD1-212ENST00000567944 KBTBD2Q8IY47 623 aa5.43□□□□□ -1.54
HERPUD1-212ENST00000567944 ZDHHC14Q8IZN3 488 aa5.43□□□□□ -1.54
HERPUD1-212ENST00000567944 NKD2Q969F2 451 aaPredicted RBP5.43□□□□□ -1.54
HERPUD1-212ENST00000567944 C20orf173Q96LM9 149 aa5.43□□□□□ -1.54
HERPUD1-212ENST00000567944 SOX7Q9BT81 388 aa5.43□□□□□ -1.54
HERPUD1-212ENST00000567944 ANO3Q9BYT9 981 aa5.43□□□□□ -1.54
HERPUD1-212ENST00000567944 MTG2Q9H4K7 406 aa5.43□□□□□ -1.54
HERPUD1-212ENST00000567944 KCMF1Q9P0J7 381 aa5.43□□□□□ -1.54
HERPUD1-212ENST00000567944 MCM8Q9UJA3 840 aa5.43□□□□□ -1.54
HERPUD1-212ENST00000567944 FBXO10Q9UK96 956 aa5.43□□□□□ -1.54
HERPUD1-212ENST00000567944 NOC2LQ9Y3T9 749 aaKnown RBP5.43□□□□□ -1.54
HERPUD1-212ENST00000567944 A0A0G2JLL6 359 aaPredicted RBP5.42□□□□□ -1.54
HERPUD1-212ENST00000567944 OPHN1O60890 802 aa5.42□□□□□ -1.54
HERPUD1-212ENST00000567944 APOL3O95236 402 aa5.42□□□□□ -1.54
HERPUD1-212ENST00000567944 INHBBP09529 407 aa5.42□□□□□ -1.54
HERPUD1-212ENST00000567944 CLEC2LP0C7M8 214 aa5.42□□□□□ -1.54
HERPUD1-212ENST00000567944 CPEP16870 476 aa5.42□□□□□ -1.54
HERPUD1-212ENST00000567944 HOXA5P20719 270 aa5.42□□□□□ -1.54
HERPUD1-212ENST00000567944 BCAR1P56945 870 aa5.42□□□□□ -1.54
HERPUD1-212ENST00000567944 TBR1Q16650 682 aa5.42□□□□□ -1.54
HERPUD1-212ENST00000567944 INAVAQ3KP66 663 aa5.42□□□□□ -1.54
HERPUD1-212ENST00000567944 PITRM1Q5JRX3 1037 aa5.42□□□□□ -1.54
HERPUD1-212ENST00000567944 TIGD7Q6NT04 549 aaPredicted RBP5.42□□□□□ -1.54
HERPUD1-212ENST00000567944 TTLL10Q6ZVT0 673 aa5.42□□□□□ -1.54
HERPUD1-212ENST00000567944 BMP8AQ7Z5Y6 402 aa5.42□□□□□ -1.54
HERPUD1-212ENST00000567944 LMBR1Q8WVP7 490 aa5.42□□□□□ -1.54
HERPUD1-212ENST00000567944 ORAI2Q96SN7 254 aa5.42□□□□□ -1.54
HERPUD1-212ENST00000567944 CARD11Q9BXL7 1154 aa5.42□□□□□ -1.54
HERPUD1-212ENST00000567944 ADAM7Q9H2U9 754 aa5.42□□□□□ -1.54
HERPUD1-212ENST00000567944 ZCCHC4Q9H5U6 513 aa5.42□□□□□ -1.54
HERPUD1-212ENST00000567944 BARX1Q9HBU1 254 aaPredicted RBP5.42□□□□□ -1.54
HERPUD1-212ENST00000567944 ZDHHC9Q9Y397 364 aa5.42□□□□□ -1.54
HERPUD1-212ENST00000567944 MYPNQ86TC9 1320 aa5.42□□□□□ -1.54
HERPUD1-212ENST00000567944 PRICKLE3O43900 615 aaPredicted RBP5.41□□□□□ -1.54
HERPUD1-212ENST00000567944 SASH1O94885 1247 aa5.41□□□□□ -1.54
HERPUD1-212ENST00000567944 HMGCRP04035 888 aa5.41□□□□□ -1.54
HERPUD1-212ENST00000567944 KIAA2012Q0VF49 1180 aa5.41□□□□□ -1.54
HERPUD1-212ENST00000567944 TRIM25Q14258 630 aaKnown RBP5.41□□□□□ -1.54
HERPUD1-212ENST00000567944 USP10Q14694 798 aaKnown RBP5.41□□□□□ -1.54
HERPUD1-212ENST00000567944 PCOLCEQ15113 449 aa5.41□□□□□ -1.54
HERPUD1-212ENST00000567944 IQSEC1Q6DN90 963 aa5.41□□□□□ -1.54
HERPUD1-212ENST00000567944 FRMD5Q7Z6J6 570 aa5.41□□□□□ -1.54
HERPUD1-212ENST00000567944 CBARPQ8N350 705 aaPredicted RBP5.41□□□□□ -1.54
HERPUD1-212ENST00000567944 KIAA1683Q9H0B3 1180 aa5.41□□□□□ -1.54
HERPUD1-212ENST00000567944 SLC5A4Q9NY91 659 aa5.41□□□□□ -1.54
HERPUD1-212ENST00000567944 INVSQ9Y283 1065 aa5.41□□□□□ -1.54
HERPUD1-212ENST00000567944 NUMBLQ9Y6R0 609 aa5.41□□□□□ -1.54
HERPUD1-212ENST00000567944 MATN2O00339 956 aa5.4□□□□□ -1.54
HERPUD1-212ENST00000567944 PCDH8O95206 1070 aa5.4□□□□□ -1.54
HERPUD1-212ENST00000567944 CNOT4O95628 575 aaKnown RBP5.4□□□□□ -1.54
HERPUD1-212ENST00000567944 GPR3P46089 330 aa5.4□□□□□ -1.54
HERPUD1-212ENST00000567944 MRE11P49959 708 aa5.4□□□□□ -1.54
HERPUD1-212ENST00000567944 MTMR1Q13613 665 aa5.4□□□□□ -1.54
HERPUD1-212ENST00000567944 FSCN1Q16658 493 aaKnown RBP5.4□□□□□ -1.54
HERPUD1-212ENST00000567944 DGKDQ16760 1214 aa5.4□□□□□ -1.54
HERPUD1-212ENST00000567944 CT83Q5H943 113 aa5.4□□□□□ -1.54
HERPUD1-212ENST00000567944 ZFYVE27Q5T4F4 411 aa5.4□□□□□ -1.54
HERPUD1-212ENST00000567944 NECAB2Q7Z6G3 386 aa5.4□□□□□ -1.54
HERPUD1-212ENST00000567944 FERMT3Q86UX7 667 aa5.4□□□□□ -1.54
HERPUD1-212ENST00000567944 CNTD1Q8N815 330 aa5.4□□□□□ -1.54
HERPUD1-212ENST00000567944 PPP1R14CQ8TAE6 165 aa5.4□□□□□ -1.54
HERPUD1-212ENST00000567944 WDR48Q8TAF3 677 aa5.4□□□□□ -1.54
HERPUD1-212ENST00000567944 PTPN18Q99952 460 aa5.4□□□□□ -1.54
HERPUD1-212ENST00000567944 FDXACB1Q9BRP7 624 aaPredicted RBP5.4□□□□□ -1.54
HERPUD1-212ENST00000567944 PUS7LQ9H0K6 701 aaKnown RBP5.4□□□□□ -1.54
HERPUD1-212ENST00000567944 CCDC8Q9H0W5 538 aaPredicted RBP5.4□□□□□ -1.54
HERPUD1-212ENST00000567944 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.4□□□□□ -1.54
HERPUD1-212ENST00000567944 C14orf119Q9NWQ9 140 aa5.4□□□□□ -1.54
HERPUD1-212ENST00000567944 NOP58Q9Y2X3 529 aaKnown RBP5.4□□□□□ -1.54
HERPUD1-212ENST00000567944 SLC4A7Q9Y6M7 1214 aa5.4□□□□□ -1.54
HERPUD1-212ENST00000567944 WASHC2CQ9Y4E1 1318 aa5.4□□□□□ -1.55
HERPUD1-212ENST00000567944 B4GALT4O60513 344 aa5.39□□□□□ -1.55
HERPUD1-212ENST00000567944 RAB11FIP3O75154 756 aa5.39□□□□□ -1.55
HERPUD1-212ENST00000567944 KATNA1O75449 491 aa5.39□□□□□ -1.55
HERPUD1-212ENST00000567944 CNR2P34972 360 aa5.39□□□□□ -1.55
HERPUD1-212ENST00000567944 GUCY2FP51841 1108 aa5.39□□□□□ -1.55
HERPUD1-212ENST00000567944 RRADP55042 308 aa5.39□□□□□ -1.55
HERPUD1-212ENST00000567944 SCAND1P57086 179 aa5.39□□□□□ -1.55
HERPUD1-212ENST00000567944 HGFACQ04756 655 aa5.39□□□□□ -1.55
HERPUD1-212ENST00000567944 MAP3K12Q12852 859 aa5.39□□□□□ -1.55
HERPUD1-212ENST00000567944 FAM50AQ14320 339 aaKnown RBP5.39□□□□□ -1.55
HERPUD1-212ENST00000567944 RNF151Q2KHN1 245 aa5.39□□□□□ -1.55
HERPUD1-212ENST00000567944 AGBL4Q5VU57 503 aa5.39□□□□□ -1.55
HERPUD1-212ENST00000567944 CCDC62Q6P9F0 684 aa5.39□□□□□ -1.55
HERPUD1-212ENST00000567944 IFNL2Q8IZJ0 200 aa5.39□□□□□ -1.55
HERPUD1-212ENST00000567944 ZCRB1Q8TBF4 217 aaKnown RBP5.39□□□□□ -1.55
HERPUD1-212ENST00000567944 STAG1Q8WVM7 1258 aa5.39□□□□□ -1.55
HERPUD1-212ENST00000567944 CFHR4Q92496 578 aa5.39□□□□□ -1.55
HERPUD1-212ENST00000567944 RPGRQ92834 1020 aaKnown RBP5.39□□□□□ -1.55
HERPUD1-212ENST00000567944 EAF2Q96CJ1 260 aaPredicted RBP5.39□□□□□ -1.55
HERPUD1-212ENST00000567944 AHCYL2Q96HN2 611 aaKnown RBP5.39□□□□□ -1.55
HERPUD1-212ENST00000567944 DYDC2Q96IM9 177 aa5.39□□□□□ -1.55
HERPUD1-212ENST00000567944 SSBP3Q9BWW4 388 aaPredicted RBP5.39□□□□□ -1.55
HERPUD1-212ENST00000567944 USP40Q9NVE5 1235 aa5.39□□□□□ -1.55
HERPUD1-212ENST00000567944 SAE1Q9UBE0 346 aaPredicted RBP5.39□□□□□ -1.55
HERPUD1-212ENST00000567944 PRSS50Q9UI38 385 aa5.39□□□□□ -1.55
HERPUD1-212ENST00000567944 JAG2Q9Y219 1238 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms