RNA–Protein interactions for RNA: ENST00000567934.5

CDH11-213, Transcript of cadherin 11, humanhuman

TSL 2

Gene CDH11, Length 1,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-213ENST00000567934 CERS4Q9HA82 394 aa17.49■□□□□ 0.39
CDH11-213ENST00000567934 ERVK-5Q9HDB9 667 aa17.49■□□□□ 0.39
CDH11-213ENST00000567934 LRFN2Q9ULH4 789 aa17.49■□□□□ 0.39
CDH11-213ENST00000567934 STK24Q9Y6E0 443 aa17.49■□□□□ 0.39
CDH11-213ENST00000567934 A0A087WZ62 844 aa17.48■□□□□ 0.39
CDH11-213ENST00000567934 GAS2O43903 313 aaKnown RBP17.48■□□□□ 0.39
CDH11-213ENST00000567934 MED24O75448 989 aa17.48■□□□□ 0.39
CDH11-213ENST00000567934 LYPLA2O95372 231 aa17.48■□□□□ 0.39
CDH11-213ENST00000567934 XRCC6P12956 609 aaKnown RBP eCLIP17.48■□□□□ 0.39
CDH11-213ENST00000567934 SYT1P21579 422 aa17.48■□□□□ 0.39
CDH11-213ENST00000567934 EIF4BP23588 611 aaKnown RBP17.48■□□□□ 0.39
CDH11-213ENST00000567934 MKRN4PQ13434 485 aaPredicted RBP17.48■□□□□ 0.39
CDH11-213ENST00000567934 PDIA5Q14554 519 aa17.48■□□□□ 0.39
CDH11-213ENST00000567934 EMC2Q15006 297 aa17.48■□□□□ 0.39
CDH11-213ENST00000567934 FAM228AQ86W67 206 aa17.48■□□□□ 0.39
CDH11-213ENST00000567934 PSPC1Q8WXF1 523 aaKnown RBP17.48■□□□□ 0.39
CDH11-213ENST00000567934 NACC1Q96RE7 527 aa17.48■□□□□ 0.39
CDH11-213ENST00000567934 FDXACB1Q9BRP7 624 aaPredicted RBP17.48■□□□□ 0.39
CDH11-213ENST00000567934 POLR3CQ9BUI4 534 aaPredicted RBP17.48■□□□□ 0.39
CDH11-213ENST00000567934 DHX33Q9H6R0 707 aaKnown RBP17.48■□□□□ 0.39
CDH11-213ENST00000567934 NLRC5Q86WI3 1866 aa17.48■□□□□ 0.39
CDH11-213ENST00000567934 LCHNA4D1U4 455 aa17.47■□□□□ 0.39
CDH11-213ENST00000567934 STAG3L1P0CL83 205 aa17.47■□□□□ 0.39
CDH11-213ENST00000567934 SPATA31C1P0DKV0 1188 aa17.47■□□□□ 0.39
CDH11-213ENST00000567934 FOSL2P15408 326 aa17.47■□□□□ 0.39
CDH11-213ENST00000567934 ZSCAN20P17040 1043 aaPredicted RBP17.47■□□□□ 0.39
CDH11-213ENST00000567934 RPA1P27694 616 aa17.47■□□□□ 0.39
CDH11-213ENST00000567934 PRPHP41219 470 aa17.47■□□□□ 0.39
CDH11-213ENST00000567934 KRT79Q5XKE5 535 aa17.47■□□□□ 0.39
CDH11-213ENST00000567934 RTN4RL1Q86UN2 441 aaPredicted RBP17.47■□□□□ 0.39
CDH11-213ENST00000567934 KSR1Q8IVT5 923 aa17.47■□□□□ 0.39
CDH11-213ENST00000567934 SNX29Q8TEQ0 813 aa17.47■□□□□ 0.39
CDH11-213ENST00000567934 ARNTL2Q8WYA1 636 aa17.47■□□□□ 0.39
CDH11-213ENST00000567934 ADAM2Q99965 735 aa17.47■□□□□ 0.39
CDH11-213ENST00000567934 INO80BQ9C086 356 aaPredicted RBP17.47■□□□□ 0.39
CDH11-213ENST00000567934 ATP6V0A4Q9HBG4 840 aa17.47■□□□□ 0.39
CDH11-213ENST00000567934 STXBP5LQ9Y2K9 1186 aa17.47■□□□□ 0.39
CDH11-213ENST00000567934 COL4A3BPQ9Y5P4 624 aa17.47■□□□□ 0.39
CDH11-213ENST00000567934 ASAP2O43150 1006 aa17.46■□□□□ 0.39
CDH11-213ENST00000567934 DGAT1O75907 488 aa17.46■□□□□ 0.39
CDH11-213ENST00000567934 SRGAP2CP0DJJ0 459 aa17.46■□□□□ 0.39
CDH11-213ENST00000567934 DARSP14868 501 aaKnown RBP17.46■□□□□ 0.39
CDH11-213ENST00000567934 FGFR4P22455 802 aa17.46■□□□□ 0.39
CDH11-213ENST00000567934 IGFBP4P22692 258 aa17.46■□□□□ 0.39
CDH11-213ENST00000567934 RARRES1P49788 294 aa17.46■□□□□ 0.39
CDH11-213ENST00000567934 ATP2C1P98194 919 aaPredicted RBP17.46■□□□□ 0.39
CDH11-213ENST00000567934 TAP1Q03518 808 aa17.46■□□□□ 0.39
CDH11-213ENST00000567934 ZRSR1Q15695 479 aaKnown RBP17.46■□□□□ 0.39
CDH11-213ENST00000567934 POTEGQ6S5H5 508 aa17.46■□□□□ 0.39
CDH11-213ENST00000567934 FAM43BQ6ZT52 329 aaPredicted RBP17.46■□□□□ 0.39
CDH11-213ENST00000567934 ZNF410Q86VK4 478 aa17.46■□□□□ 0.39
CDH11-213ENST00000567934 PRPF31Q8WWY3 499 aaKnown RBP17.46■□□□□ 0.39
CDH11-213ENST00000567934 TSPYL2Q9H2G4 693 aaPredicted RBP17.46■□□□□ 0.39
CDH11-213ENST00000567934 TMX1Q9H3N1 280 aa17.46■□□□□ 0.39
CDH11-213ENST00000567934 C1orf112Q9NSG2 853 aa17.46■□□□□ 0.39
CDH11-213ENST00000567934 RNF216Q9NWF9 866 aaPredicted RBP17.46■□□□□ 0.39
CDH11-213ENST00000567934 PCDHB7Q9Y5E2 793 aa17.46■□□□□ 0.39
CDH11-213ENST00000567934 ARHGEF35A5YM69 484 aa17.45■□□□□ 0.38
CDH11-213ENST00000567934 VWA3AA6NCI4 1184 aa17.45■□□□□ 0.38
CDH11-213ENST00000567934 USO1O60763 962 aaKnown RBP17.45■□□□□ 0.38
CDH11-213ENST00000567934 CSDE1O75534 798 aaKnown RBP17.45■□□□□ 0.38
CDH11-213ENST00000567934 HTRA4P83105 476 aaPredicted RBP17.45■□□□□ 0.38
CDH11-213ENST00000567934 MAEAQ7L5Y9 396 aa17.45■□□□□ 0.38
CDH11-213ENST00000567934 NPAS4Q8IUM7 802 aa17.45■□□□□ 0.38
CDH11-213ENST00000567934 SPRYD3Q8NCJ5 442 aa17.45■□□□□ 0.38
CDH11-213ENST00000567934 LINC01599Q8WXQ3 324 aa17.45■□□□□ 0.38
CDH11-213ENST00000567934 MTUS1Q9ULD2 1270 aa17.45■□□□□ 0.38
CDH11-213ENST00000567934 KIAA1024Q9UPX6 916 aa17.45■□□□□ 0.38
CDH11-213ENST00000567934 STX6O43752 255 aa17.44■□□□□ 0.38
CDH11-213ENST00000567934 MGEA5O60502 916 aa17.44■□□□□ 0.38
CDH11-213ENST00000567934 ARHGEF15O94989 841 aa17.44■□□□□ 0.38
CDH11-213ENST00000567934 BMP15O95972 392 aa17.44■□□□□ 0.38
CDH11-213ENST00000567934 MUTP22033 750 aa17.44■□□□□ 0.38
CDH11-213ENST00000567934 SFPQP23246 707 aaKnown RBP eCLIP17.44■□□□□ 0.38
CDH11-213ENST00000567934 CDC25AP30304 524 aa17.44■□□□□ 0.38
CDH11-213ENST00000567934 SARSP49591 514 aaKnown RBP17.44■□□□□ 0.38
CDH11-213ENST00000567934 LAMTOR4Q0VGL1 99 aa17.44■□□□□ 0.38
CDH11-213ENST00000567934 MXD4Q14582 209 aaPredicted RBP17.44■□□□□ 0.38
CDH11-213ENST00000567934 ARL6IP4Q66PJ3 421 aaKnown RBP17.44■□□□□ 0.38
CDH11-213ENST00000567934 SLC24A5Q71RS6 500 aa17.44■□□□□ 0.38
CDH11-213ENST00000567934 CATSPER4Q7RTX7 472 aa17.44■□□□□ 0.38
CDH11-213ENST00000567934 FIBCD1Q8N539 461 aa17.44■□□□□ 0.38
CDH11-213ENST00000567934 IGSF22Q8N9C0 903 aa17.44■□□□□ 0.38
CDH11-213ENST00000567934 RNF149Q8NC42 400 aa17.44■□□□□ 0.38
CDH11-213ENST00000567934 TGS1Q96RS0 853 aaKnown RBP17.44■□□□□ 0.38
CDH11-213ENST00000567934 RGS18Q9NS28 235 aa17.44■□□□□ 0.38
CDH11-213ENST00000567934 DDX19AQ9NUU7 478 aaKnown RBP17.44■□□□□ 0.38
CDH11-213ENST00000567934 DBR1Q9UK59 544 aaKnown RBP17.44■□□□□ 0.38
CDH11-213ENST00000567934 MYH15Q9Y2K3 1946 aa17.43■□□□□ 0.38
CDH11-213ENST00000567934 MYH11P35749 1972 aa17.43■□□□□ 0.38
CDH11-213ENST00000567934 LINC01553A4QN01 128 aa17.43■□□□□ 0.38
CDH11-213ENST00000567934 PP2D1A8MPX8 630 aa17.43■□□□□ 0.38
CDH11-213ENST00000567934 TFDP1Q14186 410 aa17.43■□□□□ 0.38
CDH11-213ENST00000567934 BTG3Q14201 252 aaPredicted RBP17.43■□□□□ 0.38
CDH11-213ENST00000567934 SF3A1Q15459 793 aaKnown RBP17.43■□□□□ 0.38
CDH11-213ENST00000567934 IL17AQ16552 155 aa17.43■□□□□ 0.38
CDH11-213ENST00000567934 CDK5RAP3Q96JB5 506 aa17.43■□□□□ 0.38
CDH11-213ENST00000567934 RALGAPA2Q2PPJ7 1873 aa17.43■□□□□ 0.38
CDH11-213ENST00000567934 FNDC1Q4ZHG4 1894 aaPredicted RBP17.43■□□□□ 0.38
CDH11-213ENST00000567934 RFXAPO00287 272 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms