RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 MAP7D3Q8IWC1 876 aa13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 AGGF1Q8N302 714 aaeCLIP13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 ALG13Q9NP73 1137 aaKnown RBP13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 PNPLA6Q8IY17 1366 aa13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 TESPA1A2RU30 521 aaPredicted RBP13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 NMT2O60551 498 aa13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 EEF1DP29692 281 aaKnown RBP13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 SERPINB4P48594 390 aa13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 EZH2Q15910 746 aaKnown RBP13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 TBC1D22AQ8WUA7 517 aa13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 AMNQ9BXJ7 453 aa13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 FIS1Q9Y3D6 152 aa13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 USP6P35125 1406 aa13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 KRT37O76014 449 aa13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 NR3C1P04150 777 aa13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 HSD17B3P37058 310 aa13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 CTCFP49711 727 aaPredicted RBP13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 CAV1Q03135 178 aa13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 RABGAP1LQ5R372 815 aa13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 DNAJC24Q6P3W2 148 aa13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 RASSF3Q86WH2 238 aa13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 SUGP1Q8IWZ8 645 aaKnown RBP13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 TEX9Q8N6V9 391 aa13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 CCDC124Q96CT7 223 aaKnown RBP13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 RBM17Q96I25 401 aaKnown RBP13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 ACCSQ96QU6 501 aa13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 CYP4F11Q9HBI6 524 aa13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 E9PCH4 1651 aa13.27□□□□□ -0.28
CSPG4P13-202ENST00000567704 SSU72P8A0A1W2PR75 194 aa13.27□□□□□ -0.28
CSPG4P13-202ENST00000567704 NOP56O00567 594 aaKnown RBP13.27□□□□□ -0.28
CSPG4P13-202ENST00000567704 SH3BP5O60239 455 aa13.27□□□□□ -0.28
CSPG4P13-202ENST00000567704 ACTN1P12814 892 aa13.27□□□□□ -0.28
CSPG4P13-202ENST00000567704 DRAP1Q14919 205 aaPredicted RBP13.27□□□□□ -0.28
CSPG4P13-202ENST00000567704 LRRC36Q1X8D7 754 aa13.27□□□□□ -0.28
CSPG4P13-202ENST00000567704 SFR1Q86XK3 245 aa13.27□□□□□ -0.28
CSPG4P13-202ENST00000567704 TEKT4Q8WW24 435 aa13.27□□□□□ -0.28
CSPG4P13-202ENST00000567704 SH3GLB2Q9NR46 395 aa13.27□□□□□ -0.28
CSPG4P13-202ENST00000567704 APOBEC2Q9Y235 224 aaKnown RBP13.27□□□□□ -0.28
CSPG4P13-202ENST00000567704 A0A0G2JLW4 131 aa13.27□□□□□ -0.29
CSPG4P13-202ENST00000567704 ZBBXA8MT70 800 aa13.27□□□□□ -0.29
CSPG4P13-202ENST00000567704 TFRCP02786 760 aaKnown RBP13.27□□□□□ -0.29
CSPG4P13-202ENST00000567704 FTLP02792 175 aaPredicted RBP13.27□□□□□ -0.29
CSPG4P13-202ENST00000567704 SCARF1Q14162 830 aa13.27□□□□□ -0.29
CSPG4P13-202ENST00000567704 CDAN1Q8IWY9 1227 aa13.27□□□□□ -0.29
CSPG4P13-202ENST00000567704 RAD54LQ92698 747 aa13.27□□□□□ -0.29
CSPG4P13-202ENST00000567704 CELF4Q9BZC1 486 aaKnown RBP13.27□□□□□ -0.29
CSPG4P13-202ENST00000567704 GOLGA8IPA6NC78 632 aa13.27□□□□□ -0.29
CSPG4P13-202ENST00000567704 GOLGA8JA6NMD2 632 aa13.27□□□□□ -0.29
CSPG4P13-202ENST00000567704 GPATCH4Q5T3I0 446 aaKnown RBP13.27□□□□□ -0.29
CSPG4P13-202ENST00000567704 ANO5Q75V66 913 aa13.27□□□□□ -0.29
CSPG4P13-202ENST00000567704 LRRC34Q8IZ02 419 aa13.27□□□□□ -0.29
CSPG4P13-202ENST00000567704 RFFLQ8WZ73 363 aa13.27□□□□□ -0.29
CSPG4P13-202ENST00000567704 RAPGEF5Q92565 580 aa13.27□□□□□ -0.29
CSPG4P13-202ENST00000567704 TRIM9Q9C026 710 aa13.27□□□□□ -0.29
CSPG4P13-202ENST00000567704 ISCUQ9H1K1 167 aa13.27□□□□□ -0.29
CSPG4P13-202ENST00000567704 RAB21Q9UL25 225 aa13.27□□□□□ -0.29
CSPG4P13-202ENST00000567704 ARHGAP10A1A4S6 786 aa13.27□□□□□ -0.29
CSPG4P13-202ENST00000567704 ARL4CP56559 192 aa13.27□□□□□ -0.29
CSPG4P13-202ENST00000567704 DEUP1Q05D60 604 aa13.27□□□□□ -0.29
CSPG4P13-202ENST00000567704 BRDTQ58F21 947 aaPredicted RBP13.27□□□□□ -0.29
CSPG4P13-202ENST00000567704 RSBN1LQ6PCB5 846 aaPredicted RBP13.27□□□□□ -0.29
CSPG4P13-202ENST00000567704 DGKHQ86XP1 1220 aa13.27□□□□□ -0.29
CSPG4P13-202ENST00000567704 MCUQ8NE86 351 aa13.27□□□□□ -0.29
CSPG4P13-202ENST00000567704 MIS12Q9H081 205 aa13.27□□□□□ -0.29
CSPG4P13-202ENST00000567704 GOLPH3Q9H4A6 298 aa13.27□□□□□ -0.29
CSPG4P13-202ENST00000567704 ANKFY1Q9P2R3 1169 aa13.27□□□□□ -0.29
CSPG4P13-202ENST00000567704 TRAF3IP3Q9Y228 551 aa13.27□□□□□ -0.29
CSPG4P13-202ENST00000567704 PTPRMP28827 1452 aa13.26□□□□□ -0.29
CSPG4P13-202ENST00000567704 PAX7P23759 505 aa13.26□□□□□ -0.29
CSPG4P13-202ENST00000567704 STK4Q13043 487 aa13.26□□□□□ -0.29
CSPG4P13-202ENST00000567704 C16orf87Q6PH81 154 aa13.26□□□□□ -0.29
CSPG4P13-202ENST00000567704 LCA5Q86VQ0 697 aa13.26□□□□□ -0.29
CSPG4P13-202ENST00000567704 CCDC125Q86Z20 511 aa13.26□□□□□ -0.29
CSPG4P13-202ENST00000567704 LAMC1P11047 1609 aa13.26□□□□□ -0.29
CSPG4P13-202ENST00000567704 PLEKHG2Q9H7P9 1386 aa13.26□□□□□ -0.29
CSPG4P13-202ENST00000567704 IL1RL1Q01638 556 aa13.26□□□□□ -0.29
CSPG4P13-202ENST00000567704 TMEM259Q4ZIN3 620 aa13.26□□□□□ -0.29
CSPG4P13-202ENST00000567704 NLRP10Q86W26 655 aa13.26□□□□□ -0.29
CSPG4P13-202ENST00000567704 USP38Q8NB14 1042 aa13.26□□□□□ -0.29
CSPG4P13-202ENST00000567704 ICA1LQ8NDH6 482 aa13.26□□□□□ -0.29
CSPG4P13-202ENST00000567704 RNF25Q96BH1 459 aaPredicted RBP13.26□□□□□ -0.29
CSPG4P13-202ENST00000567704 TMEM120BA0PK00 339 aa13.26□□□□□ -0.29
CSPG4P13-202ENST00000567704 PPP1R3GB7ZBB8 358 aa13.26□□□□□ -0.29
CSPG4P13-202ENST00000567704 SORBS3O60504 671 aa13.26□□□□□ -0.29
CSPG4P13-202ENST00000567704 CYP2D6P10635 497 aa13.26□□□□□ -0.29
CSPG4P13-202ENST00000567704 KRT3P12035 628 aa13.26□□□□□ -0.29
CSPG4P13-202ENST00000567704 KLRC1P26715 233 aa13.26□□□□□ -0.29
CSPG4P13-202ENST00000567704 PDCD2Q16342 344 aaPredicted RBP13.26□□□□□ -0.29
CSPG4P13-202ENST00000567704 TRMT10CQ7L0Y3 403 aaKnown RBP13.26□□□□□ -0.29
CSPG4P13-202ENST00000567704 CASKIN2Q8WXE0 1202 aa13.26□□□□□ -0.29
CSPG4P13-202ENST00000567704 HDAC11Q96DB2 347 aa13.26□□□□□ -0.29
CSPG4P13-202ENST00000567704 DTNBP1Q96EV8 351 aa13.26□□□□□ -0.29
CSPG4P13-202ENST00000567704 NACC1Q96RE7 527 aa13.26□□□□□ -0.29
CSPG4P13-202ENST00000567704 LACRTQ9GZZ8 138 aa13.26□□□□□ -0.29
CSPG4P13-202ENST00000567704 EHD4Q9H223 541 aa13.26□□□□□ -0.29
CSPG4P13-202ENST00000567704 KCNG1Q9UIX4 513 aa13.26□□□□□ -0.29
CSPG4P13-202ENST00000567704 CCDC195A0A1B0GUA6 201 aa13.25□□□□□ -0.29
CSPG4P13-202ENST00000567704 PLEKP08567 350 aaPredicted RBP13.25□□□□□ -0.29
CSPG4P13-202ENST00000567704 YARSP54577 528 aaKnown RBP13.25□□□□□ -0.29
CSPG4P13-202ENST00000567704 ZNF564Q8TBZ8 553 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms