RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-219ENST00000567399 BAIAP3O94812 1187 aa16.85■□□□□ 0.29
COMMD4-219ENST00000567399 EYA4O95677 639 aa16.85■□□□□ 0.29
COMMD4-219ENST00000567399 SRGAP2CP0DJJ0 459 aa16.85■□□□□ 0.29
COMMD4-219ENST00000567399 LPIN1Q14693 890 aa16.85■□□□□ 0.29
COMMD4-219ENST00000567399 GPNMBQ14956 572 aa16.85■□□□□ 0.29
COMMD4-219ENST00000567399 PLEKHG4Q58EX7 1191 aa16.85■□□□□ 0.29
COMMD4-219ENST00000567399 KCTD17Q8N5Z5 321 aa16.85■□□□□ 0.29
COMMD4-219ENST00000567399 LINC01465Q8N7H1 131 aa16.85■□□□□ 0.29
COMMD4-219ENST00000567399 MCPH1Q8NEM0 835 aa16.85■□□□□ 0.29
COMMD4-219ENST00000567399 PRPF31Q8WWY3 499 aaKnown RBP16.85■□□□□ 0.29
COMMD4-219ENST00000567399 PRO3102Q9H379 93 aa16.85■□□□□ 0.29
COMMD4-219ENST00000567399 CDHR5Q9HBB8 845 aa16.85■□□□□ 0.29
COMMD4-219ENST00000567399 COL4A3BPQ9Y5P4 624 aa16.85■□□□□ 0.29
COMMD4-219ENST00000567399 WDR81Q562E7 1941 aa16.85■□□□□ 0.29
COMMD4-219ENST00000567399 GPR182O15218 404 aa16.84■□□□□ 0.29
COMMD4-219ENST00000567399 CD52P31358 61 aa16.84■□□□□ 0.29
COMMD4-219ENST00000567399 GPC3P51654 580 aa16.84■□□□□ 0.29
COMMD4-219ENST00000567399 MKRN4PQ13434 485 aaPredicted RBP16.84■□□□□ 0.29
COMMD4-219ENST00000567399 TFDP1Q14186 410 aa16.84■□□□□ 0.29
COMMD4-219ENST00000567399 DHX8Q14562 1220 aaKnown RBP16.84■□□□□ 0.29
COMMD4-219ENST00000567399 MXD4Q14582 209 aaPredicted RBP16.84■□□□□ 0.29
COMMD4-219ENST00000567399 KARSQ15046 597 aaKnown RBP16.84■□□□□ 0.29
COMMD4-219ENST00000567399 HYIQ5T013 277 aa16.84■□□□□ 0.29
COMMD4-219ENST00000567399 RRAGBQ5VZM2 374 aa16.84■□□□□ 0.29
COMMD4-219ENST00000567399 ZNF410Q86VK4 478 aa16.84■□□□□ 0.29
COMMD4-219ENST00000567399 KSR1Q8IVT5 923 aa16.84■□□□□ 0.29
COMMD4-219ENST00000567399 SYMPKQ92797 1274 aaKnown RBP16.84■□□□□ 0.29
COMMD4-219ENST00000567399 EPSTI1Q96J88 318 aa16.84■□□□□ 0.29
COMMD4-219ENST00000567399 SPATA32Q96LK8 384 aa16.84■□□□□ 0.29
COMMD4-219ENST00000567399 PNMA5Q96PV4 448 aa16.84■□□□□ 0.29
COMMD4-219ENST00000567399 INO80BQ9C086 356 aaPredicted RBP16.84■□□□□ 0.29
COMMD4-219ENST00000567399 POLR3FQ9H1D9 316 aaPredicted RBP16.84■□□□□ 0.29
COMMD4-219ENST00000567399 DNAH12Q6ZR08 3092 aa16.84■□□□□ 0.29
COMMD4-219ENST00000567399 TANC1Q9C0D5 1861 aa16.84■□□□□ 0.29
COMMD4-219ENST00000567399 PDE4DIPQ5VU43 2346 aa16.84■□□□□ 0.29
COMMD4-219ENST00000567399 A0A087WZ62 844 aa16.83■□□□□ 0.28
COMMD4-219ENST00000567399 CUTAO60888 179 aa16.83■□□□□ 0.28
COMMD4-219ENST00000567399 CYP11B2P19099 503 aa16.83■□□□□ 0.28
COMMD4-219ENST00000567399 EIF4BP23588 611 aaKnown RBP16.83■□□□□ 0.28
COMMD4-219ENST00000567399 LAMTOR4Q0VGL1 99 aa16.83■□□□□ 0.28
COMMD4-219ENST00000567399 GRB10Q13322 594 aa16.83■□□□□ 0.28
COMMD4-219ENST00000567399 HABP4Q5JVS0 413 aaKnown RBP16.83■□□□□ 0.28
COMMD4-219ENST00000567399 FDXACB1Q9BRP7 624 aaPredicted RBP16.83■□□□□ 0.28
COMMD4-219ENST00000567399 PANK2Q9BZ23 570 aa16.83■□□□□ 0.28
COMMD4-219ENST00000567399 OSBPL7Q9BZF2 842 aa16.83■□□□□ 0.28
COMMD4-219ENST00000567399 CCSER1Q9C0I3 900 aa16.83■□□□□ 0.28
COMMD4-219ENST00000567399 ADAMTS10Q9H324 1103 aa16.83■□□□□ 0.28
COMMD4-219ENST00000567399 PADI3Q9ULW8 664 aa16.83■□□□□ 0.28
COMMD4-219ENST00000567399 NOC2LQ9Y3T9 749 aaKnown RBP16.83■□□□□ 0.28
COMMD4-219ENST00000567399 MORC2Q9Y6X9 1032 aaPredicted RBP16.83■□□□□ 0.28
COMMD4-219ENST00000567399 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.82■□□□□ 0.28
COMMD4-219ENST00000567399 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.82■□□□□ 0.28
COMMD4-219ENST00000567399 AMHP03971 560 aa16.82■□□□□ 0.28
COMMD4-219ENST00000567399 KRT18P05783 430 aaKnown RBP16.82■□□□□ 0.28
COMMD4-219ENST00000567399 PLA2G4BP0C869 781 aa16.82■□□□□ 0.28
COMMD4-219ENST00000567399 PLCG1P19174 1290 aa16.82■□□□□ 0.28
COMMD4-219ENST00000567399 IBSPP21815 317 aaPredicted RBP16.82■□□□□ 0.28
COMMD4-219ENST00000567399 TPRNQ4KMQ1 711 aa16.82■□□□□ 0.28
COMMD4-219ENST00000567399 RNF149Q8NC42 400 aa16.82■□□□□ 0.28
COMMD4-219ENST00000567399 IFT74Q96LB3 600 aa16.82■□□□□ 0.28
COMMD4-219ENST00000567399 ZBED2Q9BTP6 218 aa16.82■□□□□ 0.28
COMMD4-219ENST00000567399 FTHL17Q9BXU8 183 aa16.82■□□□□ 0.28
COMMD4-219ENST00000567399 AGO3Q9H9G7 860 aaKnown RBP16.82■□□□□ 0.28
COMMD4-219ENST00000567399 XPNPEP1Q9NQW7 623 aa16.82■□□□□ 0.28
COMMD4-219ENST00000567399 FAM13BQ9NYF5 915 aa16.82■□□□□ 0.28
COMMD4-219ENST00000567399 CXXC1Q9P0U4 656 aaPredicted RBP16.82■□□□□ 0.28
COMMD4-219ENST00000567399 SCN5AQ14524 2016 aa16.82■□□□□ 0.28
COMMD4-219ENST00000567399 DENND3A2RUS2 1198 aa16.81■□□□□ 0.28
COMMD4-219ENST00000567399 DARSP14868 501 aaKnown RBP16.81■□□□□ 0.28
COMMD4-219ENST00000567399 ATP2A2P16615 1042 aaKnown RBP16.81■□□□□ 0.28
COMMD4-219ENST00000567399 ZSCAN20P17040 1043 aaPredicted RBP16.81■□□□□ 0.28
COMMD4-219ENST00000567399 SFPQP23246 707 aaKnown RBP eCLIP16.81■□□□□ 0.28
COMMD4-219ENST00000567399 STAT6P42226 847 aa16.81■□□□□ 0.28
COMMD4-219ENST00000567399 PHKA2P46019 1235 aa16.81■□□□□ 0.28
COMMD4-219ENST00000567399 TMEM119Q4V9L6 283 aa16.81■□□□□ 0.28
COMMD4-219ENST00000567399 CCDC73Q6ZRK6 1079 aa16.81■□□□□ 0.28
COMMD4-219ENST00000567399 USP49Q70CQ1 688 aa16.81■□□□□ 0.28
COMMD4-219ENST00000567399 KCNK18Q7Z418 384 aa16.81■□□□□ 0.28
COMMD4-219ENST00000567399 SYT2Q8N9I0 419 aaPredicted RBP16.81■□□□□ 0.28
COMMD4-219ENST00000567399 VWCEQ96DN2 955 aa16.81■□□□□ 0.28
COMMD4-219ENST00000567399 SLC9A7Q96T83 725 aa16.81■□□□□ 0.28
COMMD4-219ENST00000567399 SCAND2PQ9GZW5 306 aaPredicted RBP16.81■□□□□ 0.28
COMMD4-219ENST00000567399 GPRC5CQ9NQ84 441 aa16.81■□□□□ 0.28
COMMD4-219ENST00000567399 RCOR1Q9UKL0 485 aa16.81■□□□□ 0.28
COMMD4-219ENST00000567399 CIZ1Q9ULV3 898 aaPredicted RBP16.81■□□□□ 0.28
COMMD4-219ENST00000567399 ST3GAL5Q9UNP4 418 aa16.81■□□□□ 0.28
COMMD4-219ENST00000567399 RBM19Q9Y4C8 960 aaKnown RBP16.81■□□□□ 0.28
COMMD4-219ENST00000567399 LRRIQ4A6NIV6 560 aa16.8■□□□□ 0.28
COMMD4-219ENST00000567399 CSDE1O75534 798 aaKnown RBP16.8■□□□□ 0.28
COMMD4-219ENST00000567399 DDIT3P35638 169 aa16.8■□□□□ 0.28
COMMD4-219ENST00000567399 ARL2P36404 184 aa16.8■□□□□ 0.28
COMMD4-219ENST00000567399 WDR5P61964 334 aaKnown RBP16.8■□□□□ 0.28
COMMD4-219ENST00000567399 NCBP1Q09161 790 aaKnown RBP16.8■□□□□ 0.28
COMMD4-219ENST00000567399 RAD51AP2Q09MP3 1159 aa16.8■□□□□ 0.28
COMMD4-219ENST00000567399 PPP2R5AQ15172 486 aa16.8■□□□□ 0.28
COMMD4-219ENST00000567399 LRIT3Q3SXY7 679 aa16.8■□□□□ 0.28
COMMD4-219ENST00000567399 RINT1Q6NUQ1 792 aa16.8■□□□□ 0.28
COMMD4-219ENST00000567399 CATSPER4Q7RTX7 472 aa16.8■□□□□ 0.28
COMMD4-219ENST00000567399 FAM228AQ86W67 206 aa16.8■□□□□ 0.28
COMMD4-219ENST00000567399 MYOCDQ8IZQ8 938 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms