RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 FAM13BQ9NYF5 915 aa13.53□□□□□ -0.24
SF3B3-208ENST00000567250 SUCLA2Q9P2R7 463 aaPredicted RBP13.53□□□□□ -0.24
SF3B3-208ENST00000567250 E9PMD0 336 aa13.52□□□□□ -0.25
SF3B3-208ENST00000567250 ASAP2O43150 1006 aa13.52□□□□□ -0.25
SF3B3-208ENST00000567250 CXCL10P02778 98 aa13.52□□□□□ -0.25
SF3B3-208ENST00000567250 TMEM62Q0P6H9 643 aa13.52□□□□□ -0.25
SF3B3-208ENST00000567250 TFDP1Q14186 410 aa13.52□□□□□ -0.25
SF3B3-208ENST00000567250 SPECC1Q5M775 1068 aa13.52□□□□□ -0.25
SF3B3-208ENST00000567250 RRAGBQ5VZM2 374 aa13.52□□□□□ -0.25
SF3B3-208ENST00000567250 TRAF7Q6Q0C0 670 aa13.52□□□□□ -0.25
SF3B3-208ENST00000567250 CHRDL2Q6WN34 429 aa13.52□□□□□ -0.25
SF3B3-208ENST00000567250 TSHZ1Q6ZSZ6 1077 aa13.52□□□□□ -0.25
SF3B3-208ENST00000567250 DEFB128Q7Z7B8 93 aa13.52□□□□□ -0.25
SF3B3-208ENST00000567250 RHPN2Q8IUC4 686 aa13.52□□□□□ -0.25
SF3B3-208ENST00000567250 NLRP7Q8WX94 980 aa13.52□□□□□ -0.25
SF3B3-208ENST00000567250 PCDHA7Q9UN72 937 aa13.52□□□□□ -0.25
SF3B3-208ENST00000567250 GINS2Q9Y248 185 aa13.52□□□□□ -0.25
SF3B3-208ENST00000567250 COL4A3BPQ9Y5P4 624 aa13.52□□□□□ -0.25
SF3B3-208ENST00000567250 A0A1W2PPC1 479 aa13.51□□□□□ -0.25
SF3B3-208ENST00000567250 EFCAB14O75071 495 aa13.51□□□□□ -0.25
SF3B3-208ENST00000567250 BAIAP3O94812 1187 aa13.51□□□□□ -0.25
SF3B3-208ENST00000567250 CHRNA1P02708 482 aa13.51□□□□□ -0.25
SF3B3-208ENST00000567250 SSBP05455 408 aaKnown RBP eCLIP13.51□□□□□ -0.25
SF3B3-208ENST00000567250 CYP11B2P19099 503 aa13.51□□□□□ -0.25
SF3B3-208ENST00000567250 STAT6P42226 847 aa13.51□□□□□ -0.25
SF3B3-208ENST00000567250 GPC3P51654 580 aa13.51□□□□□ -0.25
SF3B3-208ENST00000567250 CRYBB1P53674 252 aaPredicted RBP13.51□□□□□ -0.25
SF3B3-208ENST00000567250 NLRP11P59045 1033 aaKnown RBP13.51□□□□□ -0.25
SF3B3-208ENST00000567250 PPP2R5AQ15172 486 aa13.51□□□□□ -0.25
SF3B3-208ENST00000567250 KIZQ2M2Z5 673 aa13.51□□□□□ -0.25
SF3B3-208ENST00000567250 FBXO47Q5MNV8 452 aa13.51□□□□□ -0.25
SF3B3-208ENST00000567250 ADALQ6DHV7 355 aa13.51□□□□□ -0.25
SF3B3-208ENST00000567250 CNKSR3Q6P9H4 555 aa13.51□□□□□ -0.25
SF3B3-208ENST00000567250 SYT2Q8N9I0 419 aaPredicted RBP13.51□□□□□ -0.25
SF3B3-208ENST00000567250 RAD54LQ92698 747 aa13.51□□□□□ -0.25
SF3B3-208ENST00000567250 KIFAP3Q92845 792 aa13.51□□□□□ -0.25
SF3B3-208ENST00000567250 DRC1Q96MC2 740 aa13.51□□□□□ -0.25
SF3B3-208ENST00000567250 PLIN2Q99541 437 aa13.51□□□□□ -0.25
SF3B3-208ENST00000567250 IFIH1Q9BYX4 1025 aaKnown RBP13.51□□□□□ -0.25
SF3B3-208ENST00000567250 GCOM2Q9BZD3 368 aaPredicted RBP13.51□□□□□ -0.25
SF3B3-208ENST00000567250 INO80BQ9C086 356 aaPredicted RBP13.51□□□□□ -0.25
SF3B3-208ENST00000567250 CUEDC2Q9H467 287 aa13.51□□□□□ -0.25
SF3B3-208ENST00000567250 XPNPEP1Q9NQW7 623 aa13.51□□□□□ -0.25
SF3B3-208ENST00000567250 GOLGA6L4A6NEF3 574 aa13.5□□□□□ -0.25
SF3B3-208ENST00000567250 NBNO60934 754 aa13.5□□□□□ -0.25
SF3B3-208ENST00000567250 FGBP02675 491 aa13.5□□□□□ -0.25
SF3B3-208ENST00000567250 PLA2G4BP0C869 781 aa13.5□□□□□ -0.25
SF3B3-208ENST00000567250 GHRP10912 638 aa13.5□□□□□ -0.25
SF3B3-208ENST00000567250 SFPQP23246 707 aaKnown RBP eCLIP13.5□□□□□ -0.25
SF3B3-208ENST00000567250 GUCY2CP25092 1073 aa13.5□□□□□ -0.25
SF3B3-208ENST00000567250 PAK2Q13177 524 aa13.5□□□□□ -0.25
SF3B3-208ENST00000567250 DRP2Q13474 957 aa13.5□□□□□ -0.25
SF3B3-208ENST00000567250 MBTPS1Q14703 1052 aa13.5□□□□□ -0.25
SF3B3-208ENST00000567250 AXDND1Q5T1B0 1012 aaPredicted RBP13.5□□□□□ -0.25
SF3B3-208ENST00000567250 FAM102BQ5T8I3 360 aa13.5□□□□□ -0.25
SF3B3-208ENST00000567250 RESP18Q5W5W9 173 aa13.5□□□□□ -0.25
SF3B3-208ENST00000567250 KCNK18Q7Z418 384 aa13.5□□□□□ -0.25
SF3B3-208ENST00000567250 TDHQ8IZJ6 230 aa13.5□□□□□ -0.25
SF3B3-208ENST00000567250 TET1Q8NFU7 2136 aa13.5□□□□□ -0.25
SF3B3-208ENST00000567250 SEPT8Q92599 483 aa13.5□□□□□ -0.25
SF3B3-208ENST00000567250 TMEM143Q96AN5 459 aa13.5□□□□□ -0.25
SF3B3-208ENST00000567250 NLRP4Q96MN2 994 aa13.5□□□□□ -0.25
SF3B3-208ENST00000567250 PPP1R16BQ96T49 567 aa13.5□□□□□ -0.25
SF3B3-208ENST00000567250 OSMRQ99650 979 aa13.5□□□□□ -0.25
SF3B3-208ENST00000567250 LRRC27Q9C0I9 530 aa13.5□□□□□ -0.25
SF3B3-208ENST00000567250 POLR3FQ9H1D9 316 aaPredicted RBP13.5□□□□□ -0.25
SF3B3-208ENST00000567250 MAGEF1Q9HAY2 307 aa13.5□□□□□ -0.25
SF3B3-208ENST00000567250 A0A087WWV3 80 aa13.49□□□□□ -0.25
SF3B3-208ENST00000567250 GPR182O15218 404 aa13.49□□□□□ -0.25
SF3B3-208ENST00000567250 GPR32O75388 356 aa13.49□□□□□ -0.25
SF3B3-208ENST00000567250 RPS6KA5O75582 802 aa13.49□□□□□ -0.25
SF3B3-208ENST00000567250 KRT18P05783 430 aaKnown RBP13.49□□□□□ -0.25
SF3B3-208ENST00000567250 PHKA2P46019 1235 aa13.49□□□□□ -0.25
SF3B3-208ENST00000567250 KCNJ6P48051 423 aa13.49□□□□□ -0.25
SF3B3-208ENST00000567250 SLC12A3P55017 1021 aa13.49□□□□□ -0.25
SF3B3-208ENST00000567250 LAMTOR4Q0VGL1 99 aa13.49□□□□□ -0.25
SF3B3-208ENST00000567250 IKBKEQ14164 716 aa13.49□□□□□ -0.25
SF3B3-208ENST00000567250 LPIN1Q14693 890 aa13.49□□□□□ -0.25
SF3B3-208ENST00000567250 PCBP1Q15365 356 aaKnown RBP eCLIP13.49□□□□□ -0.25
SF3B3-208ENST00000567250 PLEKHG4Q58EX7 1191 aa13.49□□□□□ -0.25
SF3B3-208ENST00000567250 RINT1Q6NUQ1 792 aa13.49□□□□□ -0.25
SF3B3-208ENST00000567250 SHC4Q6S5L8 630 aa13.49□□□□□ -0.25
SF3B3-208ENST00000567250 USP49Q70CQ1 688 aa13.49□□□□□ -0.25
SF3B3-208ENST00000567250 GPBP1Q86WP2 473 aa13.49□□□□□ -0.25
SF3B3-208ENST00000567250 IQUBQ8NA54 791 aa13.49□□□□□ -0.25
SF3B3-208ENST00000567250 PRPF31Q8WWY3 499 aaKnown RBP13.49□□□□□ -0.25
SF3B3-208ENST00000567250 IFT74Q96LB3 600 aa13.49□□□□□ -0.25
SF3B3-208ENST00000567250 RNPC3Q96LT9 517 aaKnown RBP13.49□□□□□ -0.25
SF3B3-208ENST00000567250 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.49□□□□□ -0.256e-9■■□□□ 13.6
SF3B3-208ENST00000567250 FTHL17Q9BXU8 183 aa13.49□□□□□ -0.25
SF3B3-208ENST00000567250 ADAMTS10Q9H324 1103 aa13.49□□□□□ -0.25
SF3B3-208ENST00000567250 C17orf75Q9HAS0 396 aa13.49□□□□□ -0.25
SF3B3-208ENST00000567250 KCNG1Q9UIX4 513 aa13.49□□□□□ -0.25
SF3B3-208ENST00000567250 ODF2LQ9ULJ1 636 aa13.49□□□□□ -0.25
SF3B3-208ENST00000567250 PHLPP2Q6ZVD8 1323 aa13.48□□□□□ -0.25
SF3B3-208ENST00000567250 A0A087WZ62 844 aa13.48□□□□□ -0.25
SF3B3-208ENST00000567250 ABHD14A-ACY1A0A1B0GW23 586 aa13.48□□□□□ -0.25
SF3B3-208ENST00000567250 A0A1W2PQ27 194 aa13.48□□□□□ -0.25
SF3B3-208ENST00000567250 A0A1W2PQ64 194 aa13.48□□□□□ -0.25
SF3B3-208ENST00000567250 A0A1W2PQD8 194 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms