RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 EFCAB12Q6NXP0 572 aa16.4■□□□□ 0.22
SPG7-213ENST00000566221 TAF2Q6P1X5 1199 aa16.4■□□□□ 0.22
SPG7-213ENST00000566221 DYMQ7RTS9 669 aa16.4■□□□□ 0.22
SPG7-213ENST00000566221 SERINC5Q86VE9 423 aa16.4■□□□□ 0.22
SPG7-213ENST00000566221 LRRC71Q8N4P6 559 aa16.4■□□□□ 0.22
SPG7-213ENST00000566221 METTL13Q8N6R0 699 aa16.4■□□□□ 0.22
SPG7-213ENST00000566221 LINC01465Q8N7H1 131 aa16.4■□□□□ 0.22
SPG7-213ENST00000566221 DNAJC19Q96DA6 116 aa16.4■□□□□ 0.22
SPG7-213ENST00000566221 MAP7D2Q96T17 732 aa16.4■□□□□ 0.22
SPG7-213ENST00000566221 BLZF1Q9H2G9 400 aa16.4■□□□□ 0.22
SPG7-213ENST00000566221 SUGCTQ9HAC7 445 aa16.4■□□□□ 0.22
SPG7-213ENST00000566221 NPHP3-ACAD11A0A0J9YXS1 232 aa16.39■□□□□ 0.21
SPG7-213ENST00000566221 TLR3O15455 904 aaKnown RBP16.39■□□□□ 0.21
SPG7-213ENST00000566221 FAM13AO94988 1023 aa16.39■□□□□ 0.21
SPG7-213ENST00000566221 SMC2O95347 1197 aa16.39■□□□□ 0.21
SPG7-213ENST00000566221 CLCN3P51790 818 aa16.39■□□□□ 0.21
SPG7-213ENST00000566221 ATN1P54259 1190 aaPredicted RBP16.39■□□□□ 0.21
SPG7-213ENST00000566221 DPYDQ12882 1025 aa16.39■□□□□ 0.21
SPG7-213ENST00000566221 MAPK7Q13164 816 aa16.39■□□□□ 0.21
SPG7-213ENST00000566221 PTK7Q13308 1070 aa16.39■□□□□ 0.21
SPG7-213ENST00000566221 PNOCQ13519 176 aa16.39■□□□□ 0.21
SPG7-213ENST00000566221 CUL4BQ13620 913 aa16.39■□□□□ 0.21
SPG7-213ENST00000566221 CCDC183Q5T5S1 534 aa16.39■□□□□ 0.21
SPG7-213ENST00000566221 MAEAQ7L5Y9 396 aa16.39■□□□□ 0.21
SPG7-213ENST00000566221 UBE2Q1Q7Z7E8 422 aa16.39■□□□□ 0.21
SPG7-213ENST00000566221 CCDC65Q8IXS2 484 aa16.39■□□□□ 0.21
SPG7-213ENST00000566221 FAM126BQ8IXS8 530 aa16.39■□□□□ 0.21
SPG7-213ENST00000566221 PSPC1Q8WXF1 523 aaKnown RBP16.39■□□□□ 0.21
SPG7-213ENST00000566221 ZBTB10Q96DT7 871 aa16.39■□□□□ 0.21
SPG7-213ENST00000566221 POLR3FQ9H1D9 316 aaPredicted RBP16.39■□□□□ 0.21
SPG7-213ENST00000566221 TRMT13Q9NUP7 481 aaKnown RBP16.39■□□□□ 0.21
SPG7-213ENST00000566221 COL4A3BPQ9Y5P4 624 aa16.39■□□□□ 0.21
SPG7-213ENST00000566221 PVALEFA0A1B0GWK0 134 aa16.38■□□□□ 0.21
SPG7-213ENST00000566221 B4GALT4O60513 344 aa16.38■□□□□ 0.21
SPG7-213ENST00000566221 IDEP14735 1019 aa16.38■□□□□ 0.21
SPG7-213ENST00000566221 GAP43P17677 238 aa16.38■□□□□ 0.21
SPG7-213ENST00000566221 CASP1P29466 404 aa16.38■□□□□ 0.21
SPG7-213ENST00000566221 ZNF131P52739 623 aa16.38■□□□□ 0.21
SPG7-213ENST00000566221 RTP1P59025 263 aa16.38■□□□□ 0.21
SPG7-213ENST00000566221 CACNB1Q02641 598 aaPredicted RBP16.38■□□□□ 0.21
SPG7-213ENST00000566221 MXD4Q14582 209 aaPredicted RBP16.38■□□□□ 0.21
SPG7-213ENST00000566221 CAMK4Q16566 473 aa16.38■□□□□ 0.21
SPG7-213ENST00000566221 RUFY4Q6ZNE9 571 aa16.38■□□□□ 0.21
SPG7-213ENST00000566221 UNC13DQ70J99 1090 aa16.38■□□□□ 0.21
SPG7-213ENST00000566221 ANKRD33Q7Z3H0 272 aa16.38■□□□□ 0.21
SPG7-213ENST00000566221 RSPH3Q86UC2 560 aa16.38■□□□□ 0.21
SPG7-213ENST00000566221 DAW1Q8N136 415 aa16.38■□□□□ 0.21
SPG7-213ENST00000566221 CCDC47Q96A33 483 aaKnown RBP16.38■□□□□ 0.21
SPG7-213ENST00000566221 TMEM143Q96AN5 459 aa16.38■□□□□ 0.21
SPG7-213ENST00000566221 CTAGE1Q96RT6 745 aa16.38■□□□□ 0.21
SPG7-213ENST00000566221 C17orf75Q9HAS0 396 aa16.38■□□□□ 0.21
SPG7-213ENST00000566221 PARVGQ9HBI0 331 aa16.38■□□□□ 0.21
SPG7-213ENST00000566221 GPRC5CQ9NQ84 441 aa16.38■□□□□ 0.21
SPG7-213ENST00000566221 SUCLA2Q9P2R7 463 aaPredicted RBP16.38■□□□□ 0.21
SPG7-213ENST00000566221 AKT3Q9Y243 479 aa16.38■□□□□ 0.21
SPG7-213ENST00000566221 FRMD3A2A2Y4 597 aa16.37■□□□□ 0.21
SPG7-213ENST00000566221 RSPH10B2B2RC85 870 aa16.37■□□□□ 0.21
SPG7-213ENST00000566221 PQBP1O60828 265 aaKnown RBP16.37■□□□□ 0.21
SPG7-213ENST00000566221 RPN1P04843 607 aaKnown RBP16.37■□□□□ 0.21
SPG7-213ENST00000566221 RSPH10BP0C881 870 aa16.37■□□□□ 0.21
SPG7-213ENST00000566221 ARL2P36404 184 aa16.37■□□□□ 0.21
SPG7-213ENST00000566221 DMP1Q13316 513 aaPredicted RBP16.37■□□□□ 0.21
SPG7-213ENST00000566221 MKRN4PQ13434 485 aaPredicted RBP16.37■□□□□ 0.21
SPG7-213ENST00000566221 DRP2Q13474 957 aa16.37■□□□□ 0.21
SPG7-213ENST00000566221 PPP2R5AQ15172 486 aa16.37■□□□□ 0.21
SPG7-213ENST00000566221 TRIM60Q495X7 471 aa16.37■□□□□ 0.21
SPG7-213ENST00000566221 CAVIN1Q6NZI2 390 aaKnown RBP16.37■□□□□ 0.21
SPG7-213ENST00000566221 KIAA0319LQ8IZA0 1049 aa16.37■□□□□ 0.21
SPG7-213ENST00000566221 ZNF710Q8N1W2 664 aa16.37■□□□□ 0.21
SPG7-213ENST00000566221 CCDC155Q8N6L0 562 aa16.37■□□□□ 0.21
SPG7-213ENST00000566221 SMARCE1Q969G3 411 aa16.37■□□□□ 0.21
SPG7-213ENST00000566221 IFT74Q96LB3 600 aa16.37■□□□□ 0.21
SPG7-213ENST00000566221 TOX2Q96NM4 488 aa16.37■□□□□ 0.21
SPG7-213ENST00000566221 FAM49AQ9H0Q0 323 aaPredicted RBP16.37■□□□□ 0.21
SPG7-213ENST00000566221 TRPV6Q9H1D0 765 aa16.37■□□□□ 0.21
SPG7-213ENST00000566221 EXOC1Q9NV70 894 aa16.37■□□□□ 0.21
SPG7-213ENST00000566221 PANK4Q9NVE7 773 aa16.37■□□□□ 0.21
SPG7-213ENST00000566221 LARSQ9P2J5 1176 aaKnown RBP16.37■□□□□ 0.21
SPG7-213ENST00000566221 SEL1LQ9UBV2 794 aa16.37■□□□□ 0.21
SPG7-213ENST00000566221 CEP290O15078 2479 aa16.37■□□□□ 0.21
SPG7-213ENST00000566221 DCDC2CA8MYV0 355 aa16.36■□□□□ 0.21
SPG7-213ENST00000566221 ASAP2O43150 1006 aa16.36■□□□□ 0.21
SPG7-213ENST00000566221 CAND2O75155 1236 aa16.36■□□□□ 0.21
SPG7-213ENST00000566221 LETM1O95202 739 aaPredicted RBP16.36■□□□□ 0.21
SPG7-213ENST00000566221 CD4P01730 458 aa16.36■□□□□ 0.21
SPG7-213ENST00000566221 PLS3P13797 630 aa16.36■□□□□ 0.21
SPG7-213ENST00000566221 CDC42EP1Q00587 391 aa16.36■□□□□ 0.21
SPG7-213ENST00000566221 COASYQ13057 564 aa16.36■□□□□ 0.21
SPG7-213ENST00000566221 RPAINQ86UA6 219 aa16.36■□□□□ 0.21
SPG7-213ENST00000566221 NME8Q8N427 588 aa16.36■□□□□ 0.21
SPG7-213ENST00000566221 SPATA20Q8TB22 786 aa16.36■□□□□ 0.21
SPG7-213ENST00000566221 ASAP3Q8TDY4 903 aa16.36■□□□□ 0.21
SPG7-213ENST00000566221 DNAJB3Q8WWF6 145 aa16.36■□□□□ 0.21
SPG7-213ENST00000566221 PRPF31Q8WWY3 499 aaKnown RBP16.36■□□□□ 0.21
SPG7-213ENST00000566221 GSDMAQ96QA5 445 aa16.36■□□□□ 0.21
SPG7-213ENST00000566221 ZHX3Q9H4I2 956 aa16.36■□□□□ 0.21
SPG7-213ENST00000566221 RMND1Q9NWS8 449 aa16.36■□□□□ 0.21
SPG7-213ENST00000566221 TMEM63CQ9P1W3 806 aa16.36■□□□□ 0.21
SPG7-213ENST00000566221 KLRC4O43908 158 aa16.35■□□□□ 0.21
SPG7-213ENST00000566221 VTNP04004 478 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms