RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 CHD9Q3L8U1 2897 aa15.44■□□□□ 0.06
HERPUD1-210ENST00000565966 EIF4BP23588 611 aaKnown RBP15.43■□□□□ 0.06
HERPUD1-210ENST00000565966 POLGP54098 1239 aaPredicted RBP15.43■□□□□ 0.06
HERPUD1-210ENST00000565966 HTRA4P83105 476 aaPredicted RBP15.43■□□□□ 0.06
HERPUD1-210ENST00000565966 SF3A1Q15459 793 aaKnown RBP15.43■□□□□ 0.06
HERPUD1-210ENST00000565966 ARL6IP4Q66PJ3 421 aaKnown RBP15.43■□□□□ 0.06
HERPUD1-210ENST00000565966 RTN4RL1Q86UN2 441 aaPredicted RBP15.43■□□□□ 0.06
HERPUD1-210ENST00000565966 CATSPER3Q86XQ3 398 aa15.43■□□□□ 0.06
HERPUD1-210ENST00000565966 ZNF579Q8NAF0 562 aaKnown RBP15.43■□□□□ 0.06
HERPUD1-210ENST00000565966 NLRP7Q8WX94 980 aa15.43■□□□□ 0.06
HERPUD1-210ENST00000565966 MYLIPQ8WY64 445 aa15.43■□□□□ 0.06
HERPUD1-210ENST00000565966 POLR3CQ9BUI4 534 aaPredicted RBP15.43■□□□□ 0.06
HERPUD1-210ENST00000565966 RAB34Q9BZG1 259 aa15.43■□□□□ 0.06
HERPUD1-210ENST00000565966 TSPYL2Q9H2G4 693 aaPredicted RBP15.43■□□□□ 0.06
HERPUD1-210ENST00000565966 CLIC4Q9Y696 253 aa15.43■□□□□ 0.06
HERPUD1-210ENST00000565966 GAS2O43903 313 aaKnown RBP15.42■□□□□ 0.06
HERPUD1-210ENST00000565966 BMP15O95972 392 aa15.42■□□□□ 0.06
HERPUD1-210ENST00000565966 ZSCAN22P10073 491 aaPredicted RBP15.42■□□□□ 0.06
HERPUD1-210ENST00000565966 RPA1P27694 616 aa15.42■□□□□ 0.06
HERPUD1-210ENST00000565966 TAP1Q03518 808 aa15.42■□□□□ 0.06
HERPUD1-210ENST00000565966 PKP1Q13835 747 aa15.42■□□□□ 0.06
HERPUD1-210ENST00000565966 FAM228AQ86W67 206 aa15.42■□□□□ 0.06
HERPUD1-210ENST00000565966 RHPN2Q8IUC4 686 aa15.42■□□□□ 0.06
HERPUD1-210ENST00000565966 LINC01599Q8WXQ3 324 aa15.42■□□□□ 0.06
HERPUD1-210ENST00000565966 SCLT1Q96NL6 688 aa15.42■□□□□ 0.06
HERPUD1-210ENST00000565966 TMX1Q9H3N1 280 aa15.42■□□□□ 0.06
HERPUD1-210ENST00000565966 PRDM12Q9H4Q4 367 aa15.42■□□□□ 0.06
HERPUD1-210ENST00000565966 STK24Q9Y6E0 443 aa15.42■□□□□ 0.06
HERPUD1-210ENST00000565966 RALGAPA2Q2PPJ7 1873 aa15.42■□□□□ 0.06
HERPUD1-210ENST00000565966 FNDC1Q4ZHG4 1894 aaPredicted RBP15.42■□□□□ 0.06
HERPUD1-210ENST00000565966 CHD7Q9P2D1 2997 aa15.41■□□□□ 0.06
HERPUD1-210ENST00000565966 A0A087WWV3 80 aa15.41■□□□□ 0.06
HERPUD1-210ENST00000565966 LCHNA4D1U4 455 aa15.41■□□□□ 0.06
HERPUD1-210ENST00000565966 PP2D1A8MPX8 630 aa15.41■□□□□ 0.06
HERPUD1-210ENST00000565966 DARSP14868 501 aaKnown RBP15.41■□□□□ 0.06
HERPUD1-210ENST00000565966 MUTP22033 750 aa15.41■□□□□ 0.06
HERPUD1-210ENST00000565966 RARRES1P49788 294 aa15.41■□□□□ 0.06
HERPUD1-210ENST00000565966 PTPAQ15257 358 aa15.41■□□□□ 0.06
HERPUD1-210ENST00000565966 FOXD4L5Q5VV16 416 aaPredicted RBP15.41■□□□□ 0.06
HERPUD1-210ENST00000565966 HAUS3Q68CZ6 603 aa15.41■□□□□ 0.06
HERPUD1-210ENST00000565966 ZNF410Q86VK4 478 aa15.41■□□□□ 0.06
HERPUD1-210ENST00000565966 PIGOQ8TEQ8 1089 aa15.41■□□□□ 0.06
HERPUD1-210ENST00000565966 TCP11Q8WWU5 503 aa15.41■□□□□ 0.06
HERPUD1-210ENST00000565966 PSPC1Q8WXF1 523 aaKnown RBP15.41■□□□□ 0.06
HERPUD1-210ENST00000565966 FOXD4L4Q8WXT5 416 aaPredicted RBP15.41■□□□□ 0.06
HERPUD1-210ENST00000565966 ZNF668Q96K58 619 aaPredicted RBP15.41■□□□□ 0.06
HERPUD1-210ENST00000565966 CCDC43Q96MW1 224 aaKnown RBP15.41■□□□□ 0.06
HERPUD1-210ENST00000565966 NACC1Q96RE7 527 aa15.41■□□□□ 0.06
HERPUD1-210ENST00000565966 YME1L1Q96TA2 773 aa15.41■□□□□ 0.06
HERPUD1-210ENST00000565966 GAS2L1Q99501 681 aaPredicted RBP15.41■□□□□ 0.06
HERPUD1-210ENST00000565966 MTRQ99707 1265 aa15.41■□□□□ 0.06
HERPUD1-210ENST00000565966 GCOM2Q9BZD3 368 aaPredicted RBP15.41■□□□□ 0.06
HERPUD1-210ENST00000565966 INO80BQ9C086 356 aaPredicted RBP15.41■□□□□ 0.06
HERPUD1-210ENST00000565966 COL6A3P12111 3177 aa15.41■□□□□ 0.06
HERPUD1-210ENST00000565966 A0A087WZ62 844 aa15.4■□□□□ 0.06
HERPUD1-210ENST00000565966 DENND3A2RUS2 1198 aa15.4■□□□□ 0.06
HERPUD1-210ENST00000565966 LINC01553A4QN01 128 aa15.4■□□□□ 0.06
HERPUD1-210ENST00000565966 VWA3AA6NCI4 1184 aa15.4■□□□□ 0.06
HERPUD1-210ENST00000565966 ASAP2O43150 1006 aa15.4■□□□□ 0.06
HERPUD1-210ENST00000565966 DGAT1O75907 488 aa15.4■□□□□ 0.06
HERPUD1-210ENST00000565966 ARHGEF15O94989 841 aa15.4■□□□□ 0.06
HERPUD1-210ENST00000565966 F13A1P00488 732 aa15.4■□□□□ 0.06
HERPUD1-210ENST00000565966 STAG3L1P0CL83 205 aa15.4■□□□□ 0.06
HERPUD1-210ENST00000565966 FOSL2P15408 326 aa15.4■□□□□ 0.06
HERPUD1-210ENST00000565966 CDC25AP30304 524 aa15.4■□□□□ 0.06
HERPUD1-210ENST00000565966 CCT6AP40227 531 aaKnown RBP15.4■□□□□ 0.06
HERPUD1-210ENST00000565966 EMC2Q15006 297 aa15.4■□□□□ 0.06
HERPUD1-210ENST00000565966 ECM1Q16610 540 aa15.4■□□□□ 0.06
HERPUD1-210ENST00000565966 POTEGQ6S5H5 508 aa15.4■□□□□ 0.06
HERPUD1-210ENST00000565966 SP7Q8TDD2 431 aaPredicted RBP15.4■□□□□ 0.06
HERPUD1-210ENST00000565966 SNX29Q8TEQ0 813 aa15.4■□□□□ 0.06
HERPUD1-210ENST00000565966 TMEM143Q96AN5 459 aa15.4■□□□□ 0.06
HERPUD1-210ENST00000565966 USP28Q96RU2 1077 aa15.4■□□□□ 0.06
HERPUD1-210ENST00000565966 ADAM2Q99965 735 aa15.4■□□□□ 0.06
HERPUD1-210ENST00000565966 FDXACB1Q9BRP7 624 aaPredicted RBP15.4■□□□□ 0.06
HERPUD1-210ENST00000565966 MMTAG2Q9BU76 263 aaKnown RBP15.4■□□□□ 0.06
HERPUD1-210ENST00000565966 CERS4Q9HA82 394 aa15.4■□□□□ 0.06
HERPUD1-210ENST00000565966 RGS18Q9NS28 235 aa15.4■□□□□ 0.06
HERPUD1-210ENST00000565966 C1orf112Q9NSG2 853 aa15.4■□□□□ 0.06
HERPUD1-210ENST00000565966 RNF216Q9NWF9 866 aaPredicted RBP15.4■□□□□ 0.06
HERPUD1-210ENST00000565966 DBR1Q9UK59 544 aaKnown RBP15.4■□□□□ 0.06
HERPUD1-210ENST00000565966 COL4A3BPQ9Y5P4 624 aa15.4■□□□□ 0.06
HERPUD1-210ENST00000565966 MYH15Q9Y2K3 1946 aa15.39■□□□□ 0.05
HERPUD1-210ENST00000565966 PRRC2BQ5JSZ5 2229 aaKnown RBP15.39■□□□□ 0.05
HERPUD1-210ENST00000565966 MYH11P35749 1972 aa15.39■□□□□ 0.05
HERPUD1-210ENST00000565966 MGEA5O60502 916 aa15.39■□□□□ 0.05
HERPUD1-210ENST00000565966 ZSCAN20P17040 1043 aaPredicted RBP15.39■□□□□ 0.05
HERPUD1-210ENST00000565966 SARSP49591 514 aaKnown RBP15.39■□□□□ 0.05
HERPUD1-210ENST00000565966 CEBPZQ03701 1054 aaKnown RBP15.39■□□□□ 0.05
HERPUD1-210ENST00000565966 GRIN1Q05586 938 aa15.39■□□□□ 0.05
HERPUD1-210ENST00000565966 KRT79Q5XKE5 535 aa15.39■□□□□ 0.05
HERPUD1-210ENST00000565966 SLC24A5Q71RS6 500 aa15.39■□□□□ 0.05
HERPUD1-210ENST00000565966 NPAS4Q8IUM7 802 aa15.39■□□□□ 0.05
HERPUD1-210ENST00000565966 KSR1Q8IVT5 923 aa15.39■□□□□ 0.05
HERPUD1-210ENST00000565966 CRIPAKQ8N1N5 446 aa15.39■□□□□ 0.05
HERPUD1-210ENST00000565966 PRPF31Q8WWY3 499 aaKnown RBP15.39■□□□□ 0.05
HERPUD1-210ENST00000565966 NLRP4Q96MN2 994 aa15.39■□□□□ 0.05
HERPUD1-210ENST00000565966 TGS1Q96RS0 853 aaKnown RBP15.39■□□□□ 0.05
HERPUD1-210ENST00000565966 ATP6V0A4Q9HBG4 840 aa15.39■□□□□ 0.05
HERPUD1-210ENST00000565966 XPNPEP1Q9NQW7 623 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms