RNA–Protein interactions for RNA: ENST00000565844.1

KNOP1-203, Transcript of lysine rich nucleolar protein 1, humanhuman

TSL 5

Gene KNOP1, Length 1,394 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-203ENST00000565844 CACNB1Q02641 598 aaPredicted RBP16.93■□□□□ 0.3
KNOP1-203ENST00000565844 PTPN11Q06124 597 aaPredicted RBP16.93■□□□□ 0.3
KNOP1-203ENST00000565844 CUL4BQ13620 913 aa16.93■□□□□ 0.3
KNOP1-203ENST00000565844 HIC1Q14526 733 aa16.93■□□□□ 0.3
KNOP1-203ENST00000565844 SHHQ15465 462 aa16.93■□□□□ 0.3
KNOP1-203ENST00000565844 GDF6Q6KF10 455 aaPredicted RBP16.93■□□□□ 0.3
KNOP1-203ENST00000565844 MAEAQ7L5Y9 396 aa16.93■□□□□ 0.3
KNOP1-203ENST00000565844 METTL13Q8N6R0 699 aa16.93■□□□□ 0.3
KNOP1-203ENST00000565844 RETREG2Q8NC44 543 aa16.93■□□□□ 0.3
KNOP1-203ENST00000565844 MCPH1Q8NEM0 835 aa16.93■□□□□ 0.3
KNOP1-203ENST00000565844 FAM161BQ96MY7 647 aa16.93■□□□□ 0.3
KNOP1-203ENST00000565844 C7orf25Q9BPX7 421 aa16.93■□□□□ 0.3
KNOP1-203ENST00000565844 JPH2Q9BR39 696 aaPredicted RBP16.93■□□□□ 0.3
KNOP1-203ENST00000565844 REEP2Q9BRK0 252 aa16.93■□□□□ 0.3
KNOP1-203ENST00000565844 TRIM9Q9C026 710 aa16.93■□□□□ 0.3
KNOP1-203ENST00000565844 SUGCTQ9HAC7 445 aa16.93■□□□□ 0.3
KNOP1-203ENST00000565844 MBLAC1A4D2B0 266 aaPredicted RBP16.92■□□□□ 0.3
KNOP1-203ENST00000565844 ARVCFO00192 962 aa16.92■□□□□ 0.3
KNOP1-203ENST00000565844 TRAK2O60296 914 aa16.92■□□□□ 0.3
KNOP1-203ENST00000565844 TBCAO75347 108 aaKnown RBP16.92■□□□□ 0.3
KNOP1-203ENST00000565844 MYL1P05976 194 aa16.92■□□□□ 0.3
KNOP1-203ENST00000565844 ASIC1P78348 528 aa16.92■□□□□ 0.3
KNOP1-203ENST00000565844 ZNF200P98182 395 aaPredicted RBP16.92■□□□□ 0.3
KNOP1-203ENST00000565844 PNOCQ13519 176 aa16.92■□□□□ 0.3
KNOP1-203ENST00000565844 FAM102BQ5T8I3 360 aa16.92■□□□□ 0.3
KNOP1-203ENST00000565844 EFCAB12Q6NXP0 572 aa16.92■□□□□ 0.3
KNOP1-203ENST00000565844 CAVIN1Q6NZI2 390 aaKnown RBP16.92■□□□□ 0.3
KNOP1-203ENST00000565844 ELOA2Q8IYF1 753 aaPredicted RBP16.92■□□□□ 0.3
KNOP1-203ENST00000565844 LRRC71Q8N4P6 559 aa16.92■□□□□ 0.3
KNOP1-203ENST00000565844 SLC43A3Q8NBI5 491 aa16.92■□□□□ 0.3
KNOP1-203ENST00000565844 TIPINQ9BVW5 301 aa16.92■□□□□ 0.3
KNOP1-203ENST00000565844 XPNPEP1Q9NQW7 623 aa16.92■□□□□ 0.3
KNOP1-203ENST00000565844 TMEM39AQ9NV64 488 aa16.92■□□□□ 0.3
KNOP1-203ENST00000565844 TREHO43280 583 aa16.91■□□□□ 0.3
KNOP1-203ENST00000565844 GAS2O43903 313 aaKnown RBP16.91■□□□□ 0.3
KNOP1-203ENST00000565844 HIP1RO75146 1068 aa16.91■□□□□ 0.3
KNOP1-203ENST00000565844 IDEP14735 1019 aa16.91■□□□□ 0.3
KNOP1-203ENST00000565844 RAG1P15918 1043 aa16.91■□□□□ 0.3
KNOP1-203ENST00000565844 ADAM17P78536 824 aa16.91■□□□□ 0.3
KNOP1-203ENST00000565844 FAAP100Q0VG06 881 aa16.91■□□□□ 0.3
KNOP1-203ENST00000565844 GIT2Q14161 759 aa16.91■□□□□ 0.3
KNOP1-203ENST00000565844 PTGISQ16647 500 aa16.91■□□□□ 0.3
KNOP1-203ENST00000565844 C1orf53Q5VUE5 145 aa16.91■□□□□ 0.3
KNOP1-203ENST00000565844 CNNM4Q6P4Q7 775 aa16.91■□□□□ 0.3
KNOP1-203ENST00000565844 ERCC4Q92889 916 aaPredicted RBP16.91■□□□□ 0.3
KNOP1-203ENST00000565844 SYAP1Q96A49 352 aaPredicted RBP16.91■□□□□ 0.3
KNOP1-203ENST00000565844 TMEM143Q96AN5 459 aa16.91■□□□□ 0.3
KNOP1-203ENST00000565844 DRC1Q96MC2 740 aa16.91■□□□□ 0.3
KNOP1-203ENST00000565844 SEZ6LQ9BYH1 1024 aa16.91■□□□□ 0.3
KNOP1-203ENST00000565844 POLR3FQ9H1D9 316 aaPredicted RBP16.91■□□□□ 0.3
KNOP1-203ENST00000565844 ZHX3Q9H4I2 956 aa16.91■□□□□ 0.3
KNOP1-203ENST00000565844 POLD4Q9HCU8 107 aa16.91■□□□□ 0.3
KNOP1-203ENST00000565844 GPRC5CQ9NQ84 441 aa16.91■□□□□ 0.3
KNOP1-203ENST00000565844 ODF2LQ9ULJ1 636 aa16.91■□□□□ 0.3
KNOP1-203ENST00000565844 PCDHA2Q9Y5H9 948 aa16.91■□□□□ 0.3
KNOP1-203ENST00000565844 IGKV6-21A0A0C4DH24 114 aa16.9■□□□□ 0.3
KNOP1-203ENST00000565844 RSPH10B2B2RC85 870 aa16.9■□□□□ 0.3
KNOP1-203ENST00000565844 RSPH10BP0C881 870 aa16.9■□□□□ 0.3
KNOP1-203ENST00000565844 CYP2C9P11712 490 aa16.9■□□□□ 0.3
KNOP1-203ENST00000565844 DNM2P50570 870 aa16.9■□□□□ 0.3
KNOP1-203ENST00000565844 CLCN3P51790 818 aa16.9■□□□□ 0.3
KNOP1-203ENST00000565844 EPHB4P54760 987 aa16.9■□□□□ 0.3
KNOP1-203ENST00000565844 DPYDQ12882 1025 aa16.9■□□□□ 0.3
KNOP1-203ENST00000565844 CCDC183Q5T5S1 534 aa16.9■□□□□ 0.3
KNOP1-203ENST00000565844 RUFY4Q6ZNE9 571 aa16.9■□□□□ 0.3
KNOP1-203ENST00000565844 TCP11Q8WWU5 503 aa16.9■□□□□ 0.3
KNOP1-203ENST00000565844 DNAJC19Q96DA6 116 aa16.9■□□□□ 0.3
KNOP1-203ENST00000565844 FAM49AQ9H0Q0 323 aaPredicted RBP16.9■□□□□ 0.3
KNOP1-203ENST00000565844 TRMT13Q9NUP7 481 aaKnown RBP16.9■□□□□ 0.3
KNOP1-203ENST00000565844 NOD1Q9Y239 953 aa16.9■□□□□ 0.3
KNOP1-203ENST00000565844 FAM13AO94988 1023 aa16.89■□□□□ 0.3
KNOP1-203ENST00000565844 SMC2O95347 1197 aa16.89■□□□□ 0.3
KNOP1-203ENST00000565844 TMOD1P28289 359 aa16.89■□□□□ 0.3
KNOP1-203ENST00000565844 CDK7P50613 346 aa16.89■□□□□ 0.3
KNOP1-203ENST00000565844 MAPK7Q13164 816 aa16.89■□□□□ 0.3
KNOP1-203ENST00000565844 MKRN4PQ13434 485 aaPredicted RBP16.89■□□□□ 0.3
KNOP1-203ENST00000565844 DRP2Q13474 957 aa16.89■□□□□ 0.3
KNOP1-203ENST00000565844 SERINC5Q86VE9 423 aa16.89■□□□□ 0.3
KNOP1-203ENST00000565844 CCDC65Q8IXS2 484 aa16.89■□□□□ 0.3
KNOP1-203ENST00000565844 DAW1Q8N136 415 aa16.89■□□□□ 0.3
KNOP1-203ENST00000565844 LINC01465Q8N7H1 131 aa16.89■□□□□ 0.3
KNOP1-203ENST00000565844 PSPC1Q8WXF1 523 aaKnown RBP16.89■□□□□ 0.3
KNOP1-203ENST00000565844 KIFAP3Q92845 792 aa16.89■□□□□ 0.3
KNOP1-203ENST00000565844 TMEM63CQ9P1W3 806 aa16.89■□□□□ 0.3
KNOP1-203ENST00000565844 MROH7Q68CQ1 1323 aa16.89■□□□□ 0.29
KNOP1-203ENST00000565844 SMIM35A0A1B0GVV1 85 aa16.89■□□□□ 0.29
KNOP1-203ENST00000565844 SFI1A8K8P3 1242 aa16.89■□□□□ 0.29
KNOP1-203ENST00000565844 DCDC2CA8MYV0 355 aa16.89■□□□□ 0.29
KNOP1-203ENST00000565844 B4GALT4O60513 344 aa16.89■□□□□ 0.29
KNOP1-203ENST00000565844 RPN1P04843 607 aaKnown RBP16.89■□□□□ 0.29
KNOP1-203ENST00000565844 IER5Q5VY09 327 aa16.89■□□□□ 0.29
KNOP1-203ENST00000565844 TAF2Q6P1X5 1199 aa16.89■□□□□ 0.29
KNOP1-203ENST00000565844 UNC13DQ70J99 1090 aa16.89■□□□□ 0.29
KNOP1-203ENST00000565844 SMARCE1Q969G3 411 aa16.89■□□□□ 0.29
KNOP1-203ENST00000565844 MAP7D2Q96T17 732 aa16.89■□□□□ 0.29
KNOP1-203ENST00000565844 PPP1R12CQ9BZL4 782 aa16.89■□□□□ 0.29
KNOP1-203ENST00000565844 TRPV6Q9H1D0 765 aa16.89■□□□□ 0.29
KNOP1-203ENST00000565844 PANK4Q9NVE7 773 aa16.89■□□□□ 0.29
KNOP1-203ENST00000565844 SUCLA2Q9P2R7 463 aaPredicted RBP16.89■□□□□ 0.29
KNOP1-203ENST00000565844 AKT3Q9Y243 479 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms