RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 TMEM143Q96AN5 459 aa8.62□□□□□ -1.03
CDH1-208ENST00000565810 PAWRQ96IZ0 340 aaKnown RBP8.62□□□□□ -1.03
CDH1-208ENST00000565810 GSDMAQ96QA5 445 aa8.62□□□□□ -1.03
CDH1-208ENST00000565810 CEP89Q96ST8 783 aa8.62□□□□□ -1.03
CDH1-208ENST00000565810 REEP2Q9BRK0 252 aa8.62□□□□□ -1.03
CDH1-208ENST00000565810 POLR3FQ9H1D9 316 aaPredicted RBP8.62□□□□□ -1.03
CDH1-208ENST00000565810 PDLIM7Q9NR12 457 aa8.62□□□□□ -1.03
CDH1-208ENST00000565810 KIAA1468Q9P260 1216 aa8.62□□□□□ -1.03
CDH1-208ENST00000565810 SEL1LQ9UBV2 794 aa8.62□□□□□ -1.03
CDH1-208ENST00000565810 AKT3Q9Y243 479 aa8.62□□□□□ -1.03
CDH1-208ENST00000565810 PCDHA5Q9Y5H7 936 aa8.62□□□□□ -1.03
CDH1-208ENST00000565810 KIAA1217Q5T5P2 1943 aa8.62□□□□□ -1.03
CDH1-208ENST00000565810 GRIN2DO15399 1336 aa8.61□□□□□ -1.03
CDH1-208ENST00000565810 MBLAC1A4D2B0 266 aaPredicted RBP8.61□□□□□ -1.03
CDH1-208ENST00000565810 CCDC169A6NNP5 214 aa8.61□□□□□ -1.03
CDH1-208ENST00000565810 SFI1A8K8P3 1242 aa8.61□□□□□ -1.03
CDH1-208ENST00000565810 DCDC2CA8MYV0 355 aa8.61□□□□□ -1.03
CDH1-208ENST00000565810 H0YCG3 227 aa8.61□□□□□ -1.03
CDH1-208ENST00000565810 M0QZ92 97 aa8.61□□□□□ -1.03
CDH1-208ENST00000565810 KIF20AO95235 890 aa8.61□□□□□ -1.03
CDH1-208ENST00000565810 PRR29P0C7W0 189 aa8.61□□□□□ -1.03
CDH1-208ENST00000565810 PLS3P13797 630 aa8.61□□□□□ -1.03
CDH1-208ENST00000565810 EN2P19622 333 aaPredicted RBP8.61□□□□□ -1.03
CDH1-208ENST00000565810 CASP1P29466 404 aa8.61□□□□□ -1.03
CDH1-208ENST00000565810 HOXC8P31273 242 aa8.61□□□□□ -1.03
CDH1-208ENST00000565810 ABCD1P33897 745 aa8.61□□□□□ -1.03
CDH1-208ENST00000565810 ARL2P36404 184 aa8.61□□□□□ -1.03
CDH1-208ENST00000565810 CLCN3P51790 818 aa8.61□□□□□ -1.03
CDH1-208ENST00000565810 PEX3P56589 373 aa8.61□□□□□ -1.03
CDH1-208ENST00000565810 ADAM17P78536 824 aa8.61□□□□□ -1.03
CDH1-208ENST00000565810 ZNF200P98182 395 aaPredicted RBP8.61□□□□□ -1.03
CDH1-208ENST00000565810 COASYQ13057 564 aa8.61□□□□□ -1.03
CDH1-208ENST00000565810 PSMD2Q13200 908 aa8.61□□□□□ -1.03
CDH1-208ENST00000565810 KCNB1Q14721 858 aa8.61□□□□□ -1.03
CDH1-208ENST00000565810 KMT5BQ4FZB7 885 aa8.61□□□□□ -1.03
CDH1-208ENST00000565810 ODR4Q5SWX8 454 aa8.61□□□□□ -1.03
CDH1-208ENST00000565810 MARCH8Q5T0T0 291 aa8.61□□□□□ -1.03
CDH1-208ENST00000565810 SASS6Q6UVJ0 657 aa8.61□□□□□ -1.03
CDH1-208ENST00000565810 SLC39A5Q6ZMH5 540 aa8.61□□□□□ -1.03
CDH1-208ENST00000565810 STXBP4Q6ZWJ1 553 aa8.61□□□□□ -1.03
CDH1-208ENST00000565810 RHPN2Q8IUC4 686 aa8.61□□□□□ -1.03
CDH1-208ENST00000565810 FAM178BQ8IXR5 827 aa8.61□□□□□ -1.03
CDH1-208ENST00000565810 PRPF31Q8WWY3 499 aaKnown RBP8.61□□□□□ -1.03
CDH1-208ENST00000565810 DNAJC19Q96DA6 116 aa8.61□□□□□ -1.03
CDH1-208ENST00000565810 ABHD8Q96I13 439 aa8.61□□□□□ -1.03
CDH1-208ENST00000565810 SCLT1Q96NL6 688 aa8.61□□□□□ -1.03
CDH1-208ENST00000565810 FAM49AQ9H0Q0 323 aaPredicted RBP8.61□□□□□ -1.03
CDH1-208ENST00000565810 RNF39Q9H2S5 420 aa8.61□□□□□ -1.03
CDH1-208ENST00000565810 MRPL44Q9H9J2 332 aaKnown RBP8.61□□□□□ -1.03
CDH1-208ENST00000565810 POLD4Q9HCU8 107 aa8.61□□□□□ -1.03
CDH1-208ENST00000565810 GPRC5CQ9NQ84 441 aa8.61□□□□□ -1.03
CDH1-208ENST00000565810 XPNPEP1Q9NQW7 623 aa8.61□□□□□ -1.03
CDH1-208ENST00000565810 TMEM63CQ9P1W3 806 aa8.61□□□□□ -1.03
CDH1-208ENST00000565810 MYH15Q9Y2K3 1946 aa8.6□□□□□ -1.03
CDH1-208ENST00000565810 FRMD3A2A2Y4 597 aa8.6□□□□□ -1.03
CDH1-208ENST00000565810 LRRIQ4A6NIV6 560 aa8.6□□□□□ -1.03
CDH1-208ENST00000565810 CCDC85CA6NKD9 419 aa8.6□□□□□ -1.03
CDH1-208ENST00000565810 RSPH10B2B2RC85 870 aa8.6□□□□□ -1.03
CDH1-208ENST00000565810 PQBP1O60828 265 aaKnown RBP8.6□□□□□ -1.03
CDH1-208ENST00000565810 RSPH10BP0C881 870 aa8.6□□□□□ -1.03
CDH1-208ENST00000565810 SRGAP2CP0DJJ0 459 aa8.6□□□□□ -1.03
CDH1-208ENST00000565810 MAPTP10636 758 aaKnown RBP8.6□□□□□ -1.03
CDH1-208ENST00000565810 COL6A1P12109 1028 aa8.6□□□□□ -1.03
CDH1-208ENST00000565810 SCP2P22307 547 aa8.6□□□□□ -1.03
CDH1-208ENST00000565810 GLRA2P23416 452 aa8.6□□□□□ -1.03
CDH1-208ENST00000565810 NAMPTP43490 491 aa8.6□□□□□ -1.03
CDH1-208ENST00000565810 SARSP49591 514 aaKnown RBP8.6□□□□□ -1.03
CDH1-208ENST00000565810 MNX1P50219 401 aaPredicted RBP8.6□□□□□ -1.03
CDH1-208ENST00000565810 CDK7P50613 346 aa8.6□□□□□ -1.03
CDH1-208ENST00000565810 ZNF131P52739 623 aa8.6□□□□□ -1.03
CDH1-208ENST00000565810 SOX10P56693 466 aa8.6□□□□□ -1.03
CDH1-208ENST00000565810 LAMTOR4Q0VGL1 99 aa8.6□□□□□ -1.03
CDH1-208ENST00000565810 PTK7Q13308 1070 aa8.6□□□□□ -1.03
CDH1-208ENST00000565810 BFSP2Q13515 415 aa8.6□□□□□ -1.03
CDH1-208ENST00000565810 STIM1Q13586 685 aa8.6□□□□□ -1.03
CDH1-208ENST00000565810 FAM26FQ5R3K3 315 aa8.6□□□□□ -1.03
CDH1-208ENST00000565810 NT5DC1Q5TFE4 455 aa8.6□□□□□ -1.03
CDH1-208ENST00000565810 C1orf53Q5VUE5 145 aa8.6□□□□□ -1.03
CDH1-208ENST00000565810 SERINC5Q86VE9 423 aa8.6□□□□□ -1.03
CDH1-208ENST00000565810 ZBTB8OSQ8IWT0 167 aa8.6□□□□□ -1.03
CDH1-208ENST00000565810 KIAA0319LQ8IZA0 1049 aa8.6□□□□□ -1.03
CDH1-208ENST00000565810 TNS4Q8IZW8 715 aa8.6□□□□□ -1.03
CDH1-208ENST00000565810 CCDC155Q8N6L0 562 aa8.6□□□□□ -1.03
CDH1-208ENST00000565810 TRIML1Q8N9V2 468 aa8.6□□□□□ -1.03
CDH1-208ENST00000565810 DEPTORQ8TB45 409 aa8.6□□□□□ -1.03
CDH1-208ENST00000565810 DIS3LQ8TF46 1054 aaKnown RBP8.6□□□□□ -1.03
CDH1-208ENST00000565810 DNAJB3Q8WWF6 145 aa8.6□□□□□ -1.03
CDH1-208ENST00000565810 SPIRE2Q8WWL2 714 aa8.6□□□□□ -1.03
CDH1-208ENST00000565810 NLRP7Q8WX94 980 aa8.6□□□□□ -1.03
CDH1-208ENST00000565810 ERCC4Q92889 916 aaPredicted RBP8.6□□□□□ -1.03
CDH1-208ENST00000565810 ZBTB10Q96DT7 871 aa8.6□□□□□ -1.03
CDH1-208ENST00000565810 NLRP4Q96MN2 994 aa8.6□□□□□ -1.03
CDH1-208ENST00000565810 TOX2Q96NM4 488 aa8.6□□□□□ -1.03
CDH1-208ENST00000565810 INO80BQ9C086 356 aaPredicted RBP8.6□□□□□ -1.03
CDH1-208ENST00000565810 C2orf40Q9H1Z8 148 aa8.6□□□□□ -1.03
CDH1-208ENST00000565810 KMT5AQ9NQR1 393 aa8.6□□□□□ -1.03
CDH1-208ENST00000565810 TRMT13Q9NUP7 481 aaKnown RBP8.6□□□□□ -1.03
CDH1-208ENST00000565810 MAN1B1Q9UKM7 699 aa8.6□□□□□ -1.03
CDH1-208ENST00000565810 PCDHB13Q9Y5F0 798 aa8.6□□□□□ -1.03
CDH1-208ENST00000565810 PHLPP2Q6ZVD8 1323 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms