RNA–Protein interactions for RNA: ENST00000565666.5

CMTM3-210, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-210ENST00000565666 BRAPQ7Z569 592 aa20.87■□□□□ 0.93
CMTM3-210ENST00000565666 FERMT3Q86UX7 667 aa20.87■□□□□ 0.93
CMTM3-210ENST00000565666 CATSPER3Q86XQ3 398 aa20.87■□□□□ 0.93
CMTM3-210ENST00000565666 TCP11Q8WWU5 503 aa20.87■□□□□ 0.93
CMTM3-210ENST00000565666 TMEM143Q96AN5 459 aa20.87■□□□□ 0.93
CMTM3-210ENST00000565666 NLRP4Q96MN2 994 aa20.87■□□□□ 0.93
CMTM3-210ENST00000565666 MTRQ99707 1265 aa20.87■□□□□ 0.93
CMTM3-210ENST00000565666 POLR3CQ9BUI4 534 aaPredicted RBP20.87■□□□□ 0.93
CMTM3-210ENST00000565666 GCOM2Q9BZD3 368 aaPredicted RBP20.87■□□□□ 0.93
CMTM3-210ENST00000565666 TMX1Q9H3N1 280 aa20.87■□□□□ 0.93
CMTM3-210ENST00000565666 SZT2Q5T011 3432 aa20.87■□□□□ 0.93
CMTM3-210ENST00000565666 A0A087WWV3 80 aa20.86■□□□□ 0.93
CMTM3-210ENST00000565666 A0A087WZ62 844 aa20.86■□□□□ 0.93
CMTM3-210ENST00000565666 ARHGEF15O94989 841 aa20.86■□□□□ 0.93
CMTM3-210ENST00000565666 HSP90AA1P07900 732 aaKnown RBP20.86■□□□□ 0.93
CMTM3-210ENST00000565666 SPATA31C1P0DKV0 1188 aa20.86■□□□□ 0.93
CMTM3-210ENST00000565666 DARSP14868 501 aaKnown RBP20.86■□□□□ 0.93
CMTM3-210ENST00000565666 RPA1P27694 616 aa20.86■□□□□ 0.93
CMTM3-210ENST00000565666 CCT6AP40227 531 aaKnown RBP20.86■□□□□ 0.93
CMTM3-210ENST00000565666 PRPHP41219 470 aa20.86■□□□□ 0.93
CMTM3-210ENST00000565666 HTRA4P83105 476 aaPredicted RBP20.86■□□□□ 0.93
CMTM3-210ENST00000565666 DTHD1Q6ZMT9 781 aa20.86■□□□□ 0.93
CMTM3-210ENST00000565666 FAM43BQ6ZT52 329 aaPredicted RBP20.86■□□□□ 0.93
CMTM3-210ENST00000565666 RTN4RL1Q86UN2 441 aaPredicted RBP20.86■□□□□ 0.93
CMTM3-210ENST00000565666 ZNF410Q86VK4 478 aa20.86■□□□□ 0.93
CMTM3-210ENST00000565666 PSPC1Q8WXF1 523 aaKnown RBP20.86■□□□□ 0.93
CMTM3-210ENST00000565666 ARNTL2Q8WYA1 636 aa20.86■□□□□ 0.93
CMTM3-210ENST00000565666 ADAM2Q99965 735 aa20.86■□□□□ 0.93
CMTM3-210ENST00000565666 FDXACB1Q9BRP7 624 aaPredicted RBP20.86■□□□□ 0.93
CMTM3-210ENST00000565666 TSPYL2Q9H2G4 693 aaPredicted RBP20.86■□□□□ 0.93
CMTM3-210ENST00000565666 LRFN2Q9ULH4 789 aa20.86■□□□□ 0.93
CMTM3-210ENST00000565666 COL4A3BPQ9Y5P4 624 aa20.86■□□□□ 0.93
CMTM3-210ENST00000565666 STK24Q9Y6E0 443 aa20.86■□□□□ 0.93
CMTM3-210ENST00000565666 LINC01553A4QN01 128 aa20.85■□□□□ 0.93
CMTM3-210ENST00000565666 STAG3L1P0CL83 205 aa20.85■□□□□ 0.93
CMTM3-210ENST00000565666 XRCC6P12956 609 aaKnown RBP eCLIP20.85■□□□□ 0.93
CMTM3-210ENST00000565666 SYT1P21579 422 aa20.85■□□□□ 0.93
CMTM3-210ENST00000565666 RARRES1P49788 294 aa20.85■□□□□ 0.93
CMTM3-210ENST00000565666 PDIA5Q14554 519 aa20.85■□□□□ 0.93
CMTM3-210ENST00000565666 POTEGQ6S5H5 508 aa20.85■□□□□ 0.93
CMTM3-210ENST00000565666 KSR1Q8IVT5 923 aa20.85■□□□□ 0.93
CMTM3-210ENST00000565666 NACC1Q96RE7 527 aa20.85■□□□□ 0.93
CMTM3-210ENST00000565666 INO80BQ9C086 356 aaPredicted RBP20.85■□□□□ 0.93
CMTM3-210ENST00000565666 ATP6V0A4Q9HBG4 840 aa20.85■□□□□ 0.93
CMTM3-210ENST00000565666 MGEA5O60502 916 aa20.84■□□□□ 0.93
CMTM3-210ENST00000565666 DGAT1O75907 488 aa20.84■□□□□ 0.93
CMTM3-210ENST00000565666 ZSCAN20P17040 1043 aaPredicted RBP20.84■□□□□ 0.93
CMTM3-210ENST00000565666 FGFR4P22455 802 aa20.84■□□□□ 0.93
CMTM3-210ENST00000565666 ATP2C1P98194 919 aaPredicted RBP20.84■□□□□ 0.93
CMTM3-210ENST00000565666 NPAS4Q8IUM7 802 aa20.84■□□□□ 0.93
CMTM3-210ENST00000565666 IGSF22Q8N9C0 903 aa20.84■□□□□ 0.93
CMTM3-210ENST00000565666 SNX29Q8TEQ0 813 aa20.84■□□□□ 0.93
CMTM3-210ENST00000565666 PRPF31Q8WWY3 499 aaKnown RBP20.84■□□□□ 0.93
CMTM3-210ENST00000565666 TGS1Q96RS0 853 aaKnown RBP20.84■□□□□ 0.93
CMTM3-210ENST00000565666 C1orf112Q9NSG2 853 aa20.84■□□□□ 0.93
CMTM3-210ENST00000565666 MTUS1Q9ULD2 1270 aa20.84■□□□□ 0.93
CMTM3-210ENST00000565666 USO1O60763 962 aaKnown RBP20.83■□□□□ 0.93
CMTM3-210ENST00000565666 CSDE1O75534 798 aaKnown RBP20.83■□□□□ 0.93
CMTM3-210ENST00000565666 MUTP22033 750 aa20.83■□□□□ 0.93
CMTM3-210ENST00000565666 IGFBP4P22692 258 aa20.83■□□□□ 0.93
CMTM3-210ENST00000565666 SFPQP23246 707 aaKnown RBP eCLIP20.83■□□□□ 0.93
CMTM3-210ENST00000565666 SARSP49591 514 aaKnown RBP20.83■□□□□ 0.93
CMTM3-210ENST00000565666 KRT79Q5XKE5 535 aa20.83■□□□□ 0.93
CMTM3-210ENST00000565666 SP7Q8TDD2 431 aaPredicted RBP20.83■□□□□ 0.93
CMTM3-210ENST00000565666 XPNPEP1Q9NQW7 623 aa20.83■□□□□ 0.93
CMTM3-210ENST00000565666 RGS18Q9NS28 235 aa20.83■□□□□ 0.93
CMTM3-210ENST00000565666 RNF216Q9NWF9 866 aaPredicted RBP20.83■□□□□ 0.93
CMTM3-210ENST00000565666 DBR1Q9UK59 544 aaKnown RBP20.83■□□□□ 0.93
CMTM3-210ENST00000565666 TTC3P53804 2025 aa20.83■□□□□ 0.92
CMTM3-210ENST00000565666 ARHGEF35A5YM69 484 aa20.82■□□□□ 0.92
CMTM3-210ENST00000565666 ASAP2O43150 1006 aa20.82■□□□□ 0.92
CMTM3-210ENST00000565666 SRGAP2CP0DJJ0 459 aa20.82■□□□□ 0.92
CMTM3-210ENST00000565666 LAMTOR4Q0VGL1 99 aa20.82■□□□□ 0.92
CMTM3-210ENST00000565666 IL17AQ16552 155 aa20.82■□□□□ 0.92
CMTM3-210ENST00000565666 SLC24A5Q71RS6 500 aa20.82■□□□□ 0.92
CMTM3-210ENST00000565666 SPRED2Q7Z698 418 aa20.82■□□□□ 0.92
CMTM3-210ENST00000565666 PCDHB7Q9Y5E2 793 aa20.82■□□□□ 0.92
CMTM3-210ENST00000565666 ADGRA3Q8IWK6 1321 aa20.81■□□□□ 0.92
CMTM3-210ENST00000565666 COL4A4P53420 1690 aaPredicted RBP20.81■□□□□ 0.92
CMTM3-210ENST00000565666 COL4A6Q14031 1691 aa20.81■□□□□ 0.92
CMTM3-210ENST00000565666 VWA3AA6NCI4 1184 aa20.81■□□□□ 0.92
CMTM3-210ENST00000565666 PP2D1A8MPX8 630 aa20.81■□□□□ 0.92
CMTM3-210ENST00000565666 RFXAPO00287 272 aa20.81■□□□□ 0.92
CMTM3-210ENST00000565666 BMP15O95972 392 aa20.81■□□□□ 0.92
CMTM3-210ENST00000565666 ERVK-21P61565 698 aa20.81■□□□□ 0.92
CMTM3-210ENST00000565666 DSC3Q14574 896 aa20.81■□□□□ 0.92
CMTM3-210ENST00000565666 MXD4Q14582 209 aaPredicted RBP20.81■□□□□ 0.92
CMTM3-210ENST00000565666 ARL6IP4Q66PJ3 421 aaKnown RBP20.81■□□□□ 0.92
CMTM3-210ENST00000565666 FIBCD1Q8N539 461 aa20.81■□□□□ 0.92
CMTM3-210ENST00000565666 RNF149Q8NC42 400 aa20.81■□□□□ 0.92
CMTM3-210ENST00000565666 MAFAQ8NHW3 353 aaPredicted RBP20.81■□□□□ 0.92
CMTM3-210ENST00000565666 DDX19AQ9NUU7 478 aaKnown RBP20.81■□□□□ 0.92
CMTM3-210ENST00000565666 KIAA1024Q9UPX6 916 aa20.81■□□□□ 0.92
CMTM3-210ENST00000565666 NLRC5Q86WI3 1866 aa20.81■□□□□ 0.92
CMTM3-210ENST00000565666 C9IYK1 514 aa20.8■□□□□ 0.92
CMTM3-210ENST00000565666 STX6O43752 255 aa20.8■□□□□ 0.92
CMTM3-210ENST00000565666 DGKIO75912 1065 aa20.8■□□□□ 0.92
CMTM3-210ENST00000565666 CDC25AP30304 524 aa20.8■□□□□ 0.92
CMTM3-210ENST00000565666 TFDP1Q14186 410 aa20.8■□□□□ 0.92
CMTM3-210ENST00000565666 BTG3Q14201 252 aaPredicted RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms