RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 ADAM2Q99965 735 aa18.74■□□□□ 0.59
USB1-211ENST00000565662 LXNQ9BS40 222 aa18.74■□□□□ 0.59
USB1-211ENST00000565662 OSBPL7Q9BZF2 842 aa18.74■□□□□ 0.59
USB1-211ENST00000565662 ATP6V0A4Q9HBG4 840 aa18.74■□□□□ 0.59
USB1-211ENST00000565662 CYP26B1Q9NR63 512 aa18.74■□□□□ 0.59
USB1-211ENST00000565662 STK24Q9Y6E0 443 aa18.74■□□□□ 0.59
USB1-211ENST00000565662 DDX11L8A8MPP1 907 aa18.73■□□□□ 0.59
USB1-211ENST00000565662 RFXAPO00287 272 aa18.73■□□□□ 0.59
USB1-211ENST00000565662 ASAP2O43150 1006 aa18.73■□□□□ 0.59
USB1-211ENST00000565662 SEC24BO95487 1268 aa18.73■□□□□ 0.59
USB1-211ENST00000565662 DARSP14868 501 aaKnown RBP18.73■□□□□ 0.59
USB1-211ENST00000565662 POLGP54098 1239 aaPredicted RBP18.73■□□□□ 0.59
USB1-211ENST00000565662 UBE3AQ05086 875 aa18.73■□□□□ 0.59
USB1-211ENST00000565662 BANK1Q8NDB2 785 aa18.73■□□□□ 0.59
USB1-211ENST00000565662 ADAMTS10Q9H324 1103 aa18.73■□□□□ 0.59
USB1-211ENST00000565662 NSUN3Q9H649 340 aaKnown RBP18.73■□□□□ 0.59
USB1-211ENST00000565662 NOL7Q9UMY1 257 aaKnown RBP18.73■□□□□ 0.59
USB1-211ENST00000565662 FAM50BQ9Y247 325 aa18.73■□□□□ 0.59
USB1-211ENST00000565662 PCDHB12Q9Y5F1 795 aa18.73■□□□□ 0.59
USB1-211ENST00000565662 BTBD18B2RXH4 712 aa18.72■□□□□ 0.59
USB1-211ENST00000565662 C9IYK1 514 aa18.72■□□□□ 0.59
USB1-211ENST00000565662 LYPLA2O95372 231 aa18.72■□□□□ 0.59
USB1-211ENST00000565662 EOMESO95936 686 aa18.72■□□□□ 0.59
USB1-211ENST00000565662 YWHABP31946 246 aaKnown RBP18.72■□□□□ 0.59
USB1-211ENST00000565662 RAB27AP51159 221 aa18.72■□□□□ 0.59
USB1-211ENST00000565662 TMEM266Q2M3C6 531 aa18.72■□□□□ 0.59
USB1-211ENST00000565662 NCAPH2Q6IBW4 605 aa18.72■□□□□ 0.59
USB1-211ENST00000565662 CCDC83Q8IWF9 413 aa18.72■□□□□ 0.59
USB1-211ENST00000565662 ABI1Q8IZP0 508 aa18.72■□□□□ 0.59
USB1-211ENST00000565662 LRRC71Q8N4P6 559 aa18.72■□□□□ 0.59
USB1-211ENST00000565662 TMEM40Q8WWA1 233 aa18.72■□□□□ 0.59
USB1-211ENST00000565662 PSPC1Q8WXF1 523 aaKnown RBP18.72■□□□□ 0.59
USB1-211ENST00000565662 HAS1Q92839 578 aa18.72■□□□□ 0.59
USB1-211ENST00000565662 CEP170P1Q96L14 293 aa18.72■□□□□ 0.59
USB1-211ENST00000565662 TRAIPQ9BWF2 469 aa18.72■□□□□ 0.59
USB1-211ENST00000565662 MRPL9Q9BYD2 267 aaKnown RBP18.72■□□□□ 0.59
USB1-211ENST00000565662 TMX1Q9H3N1 280 aa18.72■□□□□ 0.59
USB1-211ENST00000565662 CUL9Q8IWT3 2517 aa18.72■□□□□ 0.59
USB1-211ENST00000565662 JAK2O60674 1132 aa18.71■□□□□ 0.59
USB1-211ENST00000565662 MUTP22033 750 aa18.71■□□□□ 0.59
USB1-211ENST00000565662 PPM1AP35813 382 aa18.71■□□□□ 0.59
USB1-211ENST00000565662 PDE12Q6L8Q7 609 aaKnown RBP18.71■□□□□ 0.59
USB1-211ENST00000565662 ANO5Q75V66 913 aa18.71■□□□□ 0.59
USB1-211ENST00000565662 FBXO18Q8NFZ0 1043 aa18.71■□□□□ 0.59
USB1-211ENST00000565662 ERMNQ8TAM6 284 aa18.71■□□□□ 0.59
USB1-211ENST00000565662 RAB34Q9BZG1 259 aa18.71■□□□□ 0.59
USB1-211ENST00000565662 DHX33Q9H6R0 707 aaKnown RBP18.71■□□□□ 0.59
USB1-211ENST00000565662 ANKEF1Q9NU02 776 aa18.71■□□□□ 0.59
USB1-211ENST00000565662 ARID2Q68CP9 1835 aa18.71■□□□□ 0.59
USB1-211ENST00000565662 FNDC1Q4ZHG4 1894 aaPredicted RBP18.71■□□□□ 0.59
USB1-211ENST00000565662 XRCC6P12956 609 aaKnown RBP eCLIP18.7■□□□□ 0.58
USB1-211ENST00000565662 LAG3P18627 525 aa18.7■□□□□ 0.58
USB1-211ENST00000565662 FAM189BP81408 668 aa18.7■□□□□ 0.58
USB1-211ENST00000565662 SPIRE1Q08AE8 756 aa18.7■□□□□ 0.58
USB1-211ENST00000565662 DSC3Q14574 896 aa18.7■□□□□ 0.58
USB1-211ENST00000565662 MXD4Q14582 209 aaPredicted RBP18.7■□□□□ 0.58
USB1-211ENST00000565662 HAUS3Q68CZ6 603 aa18.7■□□□□ 0.58
USB1-211ENST00000565662 RTN4RL1Q86UN2 441 aaPredicted RBP18.7■□□□□ 0.58
USB1-211ENST00000565662 LRRC43Q8N309 656 aa18.7■□□□□ 0.58
USB1-211ENST00000565662 PRUNE2Q8WUY3 3088 aa18.7■□□□□ 0.58
USB1-211ENST00000565662 TMEM117Q9H0C3 514 aa18.7■□□□□ 0.58
USB1-211ENST00000565662 TTC12Q9H892 705 aaPredicted RBP18.7■□□□□ 0.58
USB1-211ENST00000565662 GJB4Q9NTQ9 266 aa18.7■□□□□ 0.58
USB1-211ENST00000565662 SUCLA2Q9P2R7 463 aaPredicted RBP18.7■□□□□ 0.58
USB1-211ENST00000565662 COL4A3BPQ9Y5P4 624 aa18.7■□□□□ 0.58
USB1-211ENST00000565662 EML1O00423 815 aa18.69■□□□□ 0.58
USB1-211ENST00000565662 DGAT1O75907 488 aa18.69■□□□□ 0.58
USB1-211ENST00000565662 STBD1O95210 358 aa18.69■□□□□ 0.58
USB1-211ENST00000565662 NCBP1Q09161 790 aaKnown RBP18.69■□□□□ 0.58
USB1-211ENST00000565662 SRGAP1Q7Z6B7 1085 aa18.69■□□□□ 0.58
USB1-211ENST00000565662 RHPN2Q8IUC4 686 aa18.69■□□□□ 0.58
USB1-211ENST00000565662 GJA10Q969M2 543 aa18.69■□□□□ 0.58
USB1-211ENST00000565662 CEP89Q96ST8 783 aa18.69■□□□□ 0.58
USB1-211ENST00000565662 MTRQ99707 1265 aa18.69■□□□□ 0.58
USB1-211ENST00000565662 UBE2ZQ9H832 354 aaPredicted RBP18.69■□□□□ 0.58
USB1-211ENST00000565662 CDHR5Q9HBB8 845 aa18.69■□□□□ 0.58
USB1-211ENST00000565662 STK39Q9UEW8 545 aa18.69■□□□□ 0.58
USB1-211ENST00000565662 KIAA1671Q9BY89 1806 aa18.68■□□□□ 0.58
USB1-211ENST00000565662 A0A0U1RQF3 1178 aa18.68■□□□□ 0.58
USB1-211ENST00000565662 LAD1O00515 517 aa18.68■□□□□ 0.58
USB1-211ENST00000565662 POU5F1BQ06416 359 aa18.68■□□□□ 0.58
USB1-211ENST00000565662 TFDP1Q14186 410 aa18.68■□□□□ 0.58
USB1-211ENST00000565662 SPOUT1Q5T280 376 aaKnown RBP18.68■□□□□ 0.58
USB1-211ENST00000565662 SPRED2Q7Z698 418 aa18.68■□□□□ 0.58
USB1-211ENST00000565662 NOSTRINQ8IVI9 506 aa18.68■□□□□ 0.58
USB1-211ENST00000565662 ADAMTS19Q8TE59 1207 aa18.68■□□□□ 0.58
USB1-211ENST00000565662 PABPC5Q96DU9 382 aaKnown RBP18.68■□□□□ 0.58
USB1-211ENST00000565662 UHRF1Q96T88 793 aaPredicted RBP18.68■□□□□ 0.58
USB1-211ENST00000565662 EIF2AK1Q9BQI3 630 aaKnown RBP18.68■□□□□ 0.58
USB1-211ENST00000565662 TUFT1Q9NNX1 390 aa18.68■□□□□ 0.58
USB1-211ENST00000565662 LZTS1Q9Y250 596 aa18.68■□□□□ 0.58
USB1-211ENST00000565662 MRPL42Q9Y6G3 142 aaKnown RBP18.68■□□□□ 0.58
USB1-211ENST00000565662 A0A0C4DFX4 3053 aa18.68■□□□□ 0.58
USB1-211ENST00000565662 TNFRSF10AO00220 468 aa18.67■□□□□ 0.58
USB1-211ENST00000565662 MGEA5O60502 916 aa18.67■□□□□ 0.58
USB1-211ENST00000565662 LINC00271P0C7V0 271 aa18.67■□□□□ 0.58
USB1-211ENST00000565662 PHKA2P46019 1235 aa18.67■□□□□ 0.58
USB1-211ENST00000565662 BMS1Q14692 1282 aaKnown RBP18.67■□□□□ 0.58
USB1-211ENST00000565662 EMC2Q15006 297 aa18.67■□□□□ 0.58
USB1-211ENST00000565662 XKR9Q5GH70 373 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms