RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 NACC1Q96RE7 527 aa17.22■□□□□ 0.35
COMMD4-212ENST00000565517 PPP1R16BQ96T49 567 aa17.22■□□□□ 0.35
COMMD4-212ENST00000565517 LRWD1Q9UFC0 647 aa17.22■□□□□ 0.35
COMMD4-212ENST00000565517 COL4A6Q14031 1691 aa17.22■□□□□ 0.35
COMMD4-212ENST00000565517 ASAP2O43150 1006 aa17.21■□□□□ 0.35
COMMD4-212ENST00000565517 DGAT1O75907 488 aa17.21■□□□□ 0.35
COMMD4-212ENST00000565517 UPP2O95045 317 aa17.21■□□□□ 0.35
COMMD4-212ENST00000565517 SYT1P21579 422 aa17.21■□□□□ 0.35
COMMD4-212ENST00000565517 RARRES1P49788 294 aa17.21■□□□□ 0.35
COMMD4-212ENST00000565517 ARL6IP4Q66PJ3 421 aaKnown RBP17.21■□□□□ 0.35
COMMD4-212ENST00000565517 FAM117BQ6P1L5 589 aa17.21■□□□□ 0.35
COMMD4-212ENST00000565517 DTHD1Q6ZMT9 781 aa17.21■□□□□ 0.35
COMMD4-212ENST00000565517 RHPN2Q8IUC4 686 aa17.21■□□□□ 0.35
COMMD4-212ENST00000565517 HSCBQ8IWL3 235 aa17.21■□□□□ 0.35
COMMD4-212ENST00000565517 CRIPAKQ8N1N5 446 aa17.21■□□□□ 0.35
COMMD4-212ENST00000565517 SP7Q8TDD2 431 aaPredicted RBP17.21■□□□□ 0.35
COMMD4-212ENST00000565517 NLRP7Q8WX94 980 aa17.21■□□□□ 0.35
COMMD4-212ENST00000565517 PSPC1Q8WXF1 523 aaKnown RBP17.21■□□□□ 0.35
COMMD4-212ENST00000565517 GCOM2Q9BZD3 368 aaPredicted RBP17.21■□□□□ 0.35
COMMD4-212ENST00000565517 INO80BQ9C086 356 aaPredicted RBP17.21■□□□□ 0.35
COMMD4-212ENST00000565517 C1orf112Q9NSG2 853 aa17.21■□□□□ 0.35
COMMD4-212ENST00000565517 RNF216Q9NWF9 866 aaPredicted RBP17.21■□□□□ 0.35
COMMD4-212ENST00000565517 DBR1Q9UK59 544 aaKnown RBP17.21■□□□□ 0.35
COMMD4-212ENST00000565517 CDH23Q9H251 3354 aa17.2■□□□□ 0.34
COMMD4-212ENST00000565517 LCHNA4D1U4 455 aa17.2■□□□□ 0.34
COMMD4-212ENST00000565517 VPS37CA5D8V6 355 aaPredicted RBP17.2■□□□□ 0.34
COMMD4-212ENST00000565517 BMP15O95972 392 aa17.2■□□□□ 0.34
COMMD4-212ENST00000565517 EMC2Q15006 297 aa17.2■□□□□ 0.34
COMMD4-212ENST00000565517 PIGOQ8TEQ8 1089 aa17.2■□□□□ 0.34
COMMD4-212ENST00000565517 MYLIPQ8WY64 445 aa17.2■□□□□ 0.34
COMMD4-212ENST00000565517 CCDC43Q96MW1 224 aaKnown RBP17.2■□□□□ 0.34
COMMD4-212ENST00000565517 SCLT1Q96NL6 688 aa17.2■□□□□ 0.34
COMMD4-212ENST00000565517 YME1L1Q96TA2 773 aa17.2■□□□□ 0.34
COMMD4-212ENST00000565517 MTRQ99707 1265 aa17.2■□□□□ 0.34
COMMD4-212ENST00000565517 RGS18Q9NS28 235 aa17.2■□□□□ 0.34
COMMD4-212ENST00000565517 COL4A3BPQ9Y5P4 624 aa17.2■□□□□ 0.34
COMMD4-212ENST00000565517 RALGAPA2Q2PPJ7 1873 aa17.19■□□□□ 0.34
COMMD4-212ENST00000565517 NLRC5Q86WI3 1866 aa17.19■□□□□ 0.34
COMMD4-212ENST00000565517 A0A087WZ62 844 aa17.19■□□□□ 0.34
COMMD4-212ENST00000565517 DENND3A2RUS2 1198 aa17.19■□□□□ 0.34
COMMD4-212ENST00000565517 LINC01553A4QN01 128 aa17.19■□□□□ 0.34
COMMD4-212ENST00000565517 ARHGEF15O94989 841 aa17.19■□□□□ 0.34
COMMD4-212ENST00000565517 STAG3L1P0CL83 205 aa17.19■□□□□ 0.34
COMMD4-212ENST00000565517 PDIA4P13667 645 aaKnown RBP17.19■□□□□ 0.34
COMMD4-212ENST00000565517 SARSP49591 514 aaKnown RBP17.19■□□□□ 0.34
COMMD4-212ENST00000565517 DSC3Q14574 896 aa17.19■□□□□ 0.34
COMMD4-212ENST00000565517 MXD4Q14582 209 aaPredicted RBP17.19■□□□□ 0.34
COMMD4-212ENST00000565517 IL17AQ16552 155 aa17.19■□□□□ 0.34
COMMD4-212ENST00000565517 SLC24A5Q71RS6 500 aa17.19■□□□□ 0.34
COMMD4-212ENST00000565517 FERMT3Q86UX7 667 aa17.19■□□□□ 0.34
COMMD4-212ENST00000565517 NPAS4Q8IUM7 802 aa17.19■□□□□ 0.34
COMMD4-212ENST00000565517 PRPF31Q8WWY3 499 aaKnown RBP17.19■□□□□ 0.34
COMMD4-212ENST00000565517 TMEM143Q96AN5 459 aa17.19■□□□□ 0.34
COMMD4-212ENST00000565517 GAS2L1Q99501 681 aaPredicted RBP17.19■□□□□ 0.34
COMMD4-212ENST00000565517 ADAM2Q99965 735 aa17.19■□□□□ 0.34
COMMD4-212ENST00000565517 FDXACB1Q9BRP7 624 aaPredicted RBP17.19■□□□□ 0.34
COMMD4-212ENST00000565517 PRDM12Q9H4Q4 367 aa17.19■□□□□ 0.34
COMMD4-212ENST00000565517 ATP6V0A4Q9HBG4 840 aa17.19■□□□□ 0.34
COMMD4-212ENST00000565517 XPNPEP1Q9NQW7 623 aa17.19■□□□□ 0.34
COMMD4-212ENST00000565517 CHD7Q9P2D1 2997 aa17.19■□□□□ 0.34
COMMD4-212ENST00000565517 MGEA5O60502 916 aa17.18■□□□□ 0.34
COMMD4-212ENST00000565517 DGKIO75912 1065 aa17.18■□□□□ 0.34
COMMD4-212ENST00000565517 CCT6AP40227 531 aaKnown RBP17.18■□□□□ 0.34
COMMD4-212ENST00000565517 ERVK-21P61565 698 aa17.18■□□□□ 0.34
COMMD4-212ENST00000565517 FAM189BP81408 668 aa17.18■□□□□ 0.34
COMMD4-212ENST00000565517 POU5F1BQ06416 359 aa17.18■□□□□ 0.34
COMMD4-212ENST00000565517 LAMTOR4Q0VGL1 99 aa17.18■□□□□ 0.34
COMMD4-212ENST00000565517 KRT79Q5XKE5 535 aa17.18■□□□□ 0.34
COMMD4-212ENST00000565517 ZNF689Q96CS4 500 aaPredicted RBP17.18■□□□□ 0.34
COMMD4-212ENST00000565517 ZNF668Q96K58 619 aaPredicted RBP17.18■□□□□ 0.34
COMMD4-212ENST00000565517 TGS1Q96RS0 853 aaKnown RBP17.18■□□□□ 0.34
COMMD4-212ENST00000565517 RC3H2Q9HBD1 1191 aaKnown RBP17.18■□□□□ 0.34
COMMD4-212ENST00000565517 IFT122Q9HBG6 1241 aa17.18■□□□□ 0.34
COMMD4-212ENST00000565517 FNDC1Q4ZHG4 1894 aaPredicted RBP17.18■□□□□ 0.34
COMMD4-212ENST00000565517 C9IYK1 514 aa17.17■□□□□ 0.34
COMMD4-212ENST00000565517 FOSL2P15408 326 aa17.17■□□□□ 0.34
COMMD4-212ENST00000565517 ZSCAN20P17040 1043 aaPredicted RBP17.17■□□□□ 0.34
COMMD4-212ENST00000565517 SFPQP23246 707 aaKnown RBP eCLIP17.17■□□□□ 0.34
COMMD4-212ENST00000565517 ARL2P36404 184 aa17.17■□□□□ 0.34
COMMD4-212ENST00000565517 POTEGQ6S5H5 508 aa17.17■□□□□ 0.34
COMMD4-212ENST00000565517 SRGAP1Q7Z6B7 1085 aa17.17■□□□□ 0.34
COMMD4-212ENST00000565517 KSR1Q8IVT5 923 aa17.17■□□□□ 0.34
COMMD4-212ENST00000565517 KCTD17Q8N5Z5 321 aa17.17■□□□□ 0.34
COMMD4-212ENST00000565517 MCPH1Q8NEM0 835 aa17.17■□□□□ 0.34
COMMD4-212ENST00000565517 NLRP4Q96MN2 994 aa17.17■□□□□ 0.34
COMMD4-212ENST00000565517 SAMD11Q96NU1 681 aa17.17■□□□□ 0.34
COMMD4-212ENST00000565517 ZSCAN16Q9H4T2 348 aaPredicted RBP17.17■□□□□ 0.34
COMMD4-212ENST00000565517 ELAC1Q9H777 363 aaKnown RBP17.17■□□□□ 0.34
COMMD4-212ENST00000565517 CHST12Q9NRB3 414 aa17.17■□□□□ 0.34
COMMD4-212ENST00000565517 FOXD4L1Q9NU39 408 aa17.17■□□□□ 0.34
COMMD4-212ENST00000565517 MTMR6Q9Y217 621 aa17.17■□□□□ 0.34
COMMD4-212ENST00000565517 COL6A3P12111 3177 aa17.16■□□□□ 0.34
COMMD4-212ENST00000565517 A0A087WWV3 80 aa17.16■□□□□ 0.34
COMMD4-212ENST00000565517 STX6O43752 255 aa17.16■□□□□ 0.34
COMMD4-212ENST00000565517 POU3F3P20264 500 aaPredicted RBP17.16■□□□□ 0.34
COMMD4-212ENST00000565517 RESTQ13127 1097 aa17.16■□□□□ 0.34
COMMD4-212ENST00000565517 PCBP1Q15365 356 aaKnown RBP eCLIP17.16■□□□□ 0.34
COMMD4-212ENST00000565517 ECM1Q16610 540 aa17.16■□□□□ 0.34
COMMD4-212ENST00000565517 SNX29Q8TEQ0 813 aa17.16■□□□□ 0.34
COMMD4-212ENST00000565517 ARNTL2Q8WYA1 636 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms