RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 TMEM161AQ9NX61 479 aa17.61■□□□□ 0.41
CDH3-204ENST00000565453 TBX3O15119 743 aa17.6■□□□□ 0.41
CDH3-204ENST00000565453 CCNT1O60563 726 aaKnown RBP17.6■□□□□ 0.41
CDH3-204ENST00000565453 EIF5BO60841 1220 aaKnown RBP17.6■□□□□ 0.41
CDH3-204ENST00000565453 IBSPP21815 317 aaPredicted RBP17.6■□□□□ 0.41
CDH3-204ENST00000565453 NEK4P51957 841 aa17.6■□□□□ 0.41
CDH3-204ENST00000565453 PSMC5P62195 406 aa17.6■□□□□ 0.41
CDH3-204ENST00000565453 HYAL1Q12794 435 aa17.6■□□□□ 0.41
CDH3-204ENST00000565453 NR5A1Q13285 461 aa17.6■□□□□ 0.41
CDH3-204ENST00000565453 CTC1Q2NKJ3 1217 aa17.6■□□□□ 0.41
CDH3-204ENST00000565453 KLHL23Q8NBE8 558 aa17.6■□□□□ 0.41
CDH3-204ENST00000565453 NAP1L4Q99733 375 aaKnown RBP17.6■□□□□ 0.41
CDH3-204ENST00000565453 SH2D3AQ9BRG2 576 aa17.6■□□□□ 0.41
CDH3-204ENST00000565453 TBKBP1A7MCY6 615 aa17.59■□□□□ 0.41
CDH3-204ENST00000565453 DDX11L8A8MPP1 907 aa17.59■□□□□ 0.41
CDH3-204ENST00000565453 H3BQ06 376 aaPredicted RBP17.59■□□□□ 0.41
CDH3-204ENST00000565453 MAFO75444 373 aaPredicted RBP17.59■□□□□ 0.41
CDH3-204ENST00000565453 FGFR1P11362 822 aa17.59■□□□□ 0.41
CDH3-204ENST00000565453 KRT2P35908 639 aa17.59■□□□□ 0.41
CDH3-204ENST00000565453 LTBRP36941 435 aa17.59■□□□□ 0.41
CDH3-204ENST00000565453 POTEDQ86YR6 584 aa17.59■□□□□ 0.41
CDH3-204ENST00000565453 ATP6V0A4Q9HBG4 840 aa17.59■□□□□ 0.41
CDH3-204ENST00000565453 WRAP73Q9P2S5 460 aaPredicted RBP17.59■□□□□ 0.41
CDH3-204ENST00000565453 HCSTQ9UBK5 93 aa17.59■□□□□ 0.41
CDH3-204ENST00000565453 NCOR1O75376 2440 aa17.59■□□□□ 0.41
CDH3-204ENST00000565453 MYO7AQ13402 2215 aa17.58■□□□□ 0.4
CDH3-204ENST00000565453 GRXCR2A6NFK2 248 aa17.58■□□□□ 0.4
CDH3-204ENST00000565453 NCK2O43639 380 aa17.58■□□□□ 0.4
CDH3-204ENST00000565453 JAK2O60674 1132 aa17.58■□□□□ 0.4
CDH3-204ENST00000565453 IL9P15248 144 aa17.58■□□□□ 0.4
CDH3-204ENST00000565453 FGFR4P22455 802 aa17.58■□□□□ 0.4
CDH3-204ENST00000565453 GTF2F1P35269 517 aaKnown RBP eCLIP17.58■□□□□ 0.4
CDH3-204ENST00000565453 IRS1P35568 1242 aa17.58■□□□□ 0.4
CDH3-204ENST00000565453 QARSP47897 775 aaKnown RBP17.58■□□□□ 0.4
CDH3-204ENST00000565453 SPIRE1Q08AE8 756 aa17.58■□□□□ 0.4
CDH3-204ENST00000565453 EPHA7Q15375 998 aa17.58■□□□□ 0.4
CDH3-204ENST00000565453 PLA2G4FQ68DD2 849 aa17.58■□□□□ 0.4
CDH3-204ENST00000565453 PTCRAQ6ISU1 281 aaPredicted RBP17.58■□□□□ 0.4
CDH3-204ENST00000565453 POF1BQ8WVV4 589 aa17.58■□□□□ 0.4
CDH3-204ENST00000565453 CWH43Q9H720 699 aa17.58■□□□□ 0.4
CDH3-204ENST00000565453 CD320Q9NPF0 282 aa17.58■□□□□ 0.4
CDH3-204ENST00000565453 TYW1Q9NV66 732 aaKnown RBP17.58■□□□□ 0.4
CDH3-204ENST00000565453 CLDND1Q9NY35 253 aa17.58■□□□□ 0.4
CDH3-204ENST00000565453 PLXNA4Q9HCM2 1894 aa17.58■□□□□ 0.4
CDH3-204ENST00000565453 P4HBP07237 508 aaKnown RBP17.57■□□□□ 0.4
CDH3-204ENST00000565453 ZSCAN20P17040 1043 aaPredicted RBP17.57■□□□□ 0.4
CDH3-204ENST00000565453 NPEPPSP55786 919 aa17.57■□□□□ 0.4
CDH3-204ENST00000565453 CDC42EP1Q00587 391 aa17.57■□□□□ 0.4
CDH3-204ENST00000565453 PUS10Q3MIT2 529 aaKnown RBP17.57■□□□□ 0.4
CDH3-204ENST00000565453 ECHDC2Q86YB7 292 aa17.57■□□□□ 0.4
CDH3-204ENST00000565453 FAM178BQ8IXR5 827 aa17.57■□□□□ 0.4
CDH3-204ENST00000565453 ZNF579Q8NAF0 562 aaKnown RBP17.57■□□□□ 0.4
CDH3-204ENST00000565453 NLRP7Q8WX94 980 aa17.57■□□□□ 0.4
CDH3-204ENST00000565453 CASD1Q96PB1 797 aa17.57■□□□□ 0.4
CDH3-204ENST00000565453 TMEM117Q9H0C3 514 aa17.57■□□□□ 0.4
CDH3-204ENST00000565453 CYP26B1Q9NR63 512 aa17.57■□□□□ 0.4
CDH3-204ENST00000565453 SUCLA2Q9P2R7 463 aaPredicted RBP17.57■□□□□ 0.4
CDH3-204ENST00000565453 A0A087WZ62 844 aa17.56■□□□□ 0.4
CDH3-204ENST00000565453 BTBD18B2RXH4 712 aa17.56■□□□□ 0.4
CDH3-204ENST00000565453 DKC1O60832 514 aaKnown RBP eCLIP17.56■□□□□ 0.4
CDH3-204ENST00000565453 CSDE1O75534 798 aaKnown RBP17.56■□□□□ 0.4
CDH3-204ENST00000565453 CSPG5O95196 566 aa17.56■□□□□ 0.4
CDH3-204ENST00000565453 DNM2P50570 870 aa17.56■□□□□ 0.4
CDH3-204ENST00000565453 DLX2Q07687 328 aaPredicted RBP17.56■□□□□ 0.4
CDH3-204ENST00000565453 LRRC55Q6ZSA7 311 aa17.56■□□□□ 0.4
CDH3-204ENST00000565453 ADGRD2Q7Z7M1 963 aa17.56■□□□□ 0.4
CDH3-204ENST00000565453 ZNF598Q86UK7 904 aaKnown RBP17.56■□□□□ 0.4
CDH3-204ENST00000565453 ZNF410Q86VK4 478 aa17.56■□□□□ 0.4
CDH3-204ENST00000565453 C4orf19Q8IY42 314 aa17.56■□□□□ 0.4
CDH3-204ENST00000565453 COLGALT1Q8NBJ5 622 aa17.56■□□□□ 0.4
CDH3-204ENST00000565453 KHSRPQ92945 711 aaKnown RBP eCLIP17.56■□□□□ 0.4
CDH3-204ENST00000565453 SCLT1Q96NL6 688 aa17.56■□□□□ 0.4
CDH3-204ENST00000565453 FDXACB1Q9BRP7 624 aaPredicted RBP17.56■□□□□ 0.4
CDH3-204ENST00000565453 GCOM2Q9BZD3 368 aaPredicted RBP17.56■□□□□ 0.4
CDH3-204ENST00000565453 BRMS1Q9HCU9 246 aa17.56■□□□□ 0.4
CDH3-204ENST00000565453 RGL1Q9NZL6 768 aa17.56■□□□□ 0.4
CDH3-204ENST00000565453 PCDHB12Q9Y5F1 795 aa17.56■□□□□ 0.4
CDH3-204ENST00000565453 BDP1A6H8Y1 2624 aa17.55■□□□□ 0.4
CDH3-204ENST00000565453 A0A0U1RQF3 1178 aa17.55■□□□□ 0.4
CDH3-204ENST00000565453 WNT7AO00755 349 aa17.55■□□□□ 0.4
CDH3-204ENST00000565453 LINC01565O15544 149 aa17.55■□□□□ 0.4
CDH3-204ENST00000565453 HOXA2O43364 376 aa17.55■□□□□ 0.4
CDH3-204ENST00000565453 TBX10O75333 385 aa17.55■□□□□ 0.4
CDH3-204ENST00000565453 ATF7P17544 494 aaPredicted RBP17.55■□□□□ 0.4
CDH3-204ENST00000565453 UBE3AQ05086 875 aa17.55■□□□□ 0.4
CDH3-204ENST00000565453 ADAM15Q13444 863 aa17.55■□□□□ 0.4
CDH3-204ENST00000565453 CLLU1OSQ5K130 101 aa17.55■□□□□ 0.4
CDH3-204ENST00000565453 RHPN2Q8IUC4 686 aa17.55■□□□□ 0.4
CDH3-204ENST00000565453 KSR1Q8IVT5 923 aa17.55■□□□□ 0.4
CDH3-204ENST00000565453 DIS3L2Q8IYB7 885 aaKnown RBP17.55■□□□□ 0.4
CDH3-204ENST00000565453 SLFN12Q8IYM2 578 aa17.55■□□□□ 0.4
CDH3-204ENST00000565453 DYDC2Q96IM9 177 aa17.55■□□□□ 0.4
CDH3-204ENST00000565453 JPH2Q9BR39 696 aaPredicted RBP17.55■□□□□ 0.4
CDH3-204ENST00000565453 LXNQ9BS40 222 aa17.55■□□□□ 0.4
CDH3-204ENST00000565453 DHX33Q9H6R0 707 aaKnown RBP17.55■□□□□ 0.4
CDH3-204ENST00000565453 AAASQ9NRG9 546 aa17.55■□□□□ 0.4
CDH3-204ENST00000565453 PPME1Q9Y570 386 aa17.55■□□□□ 0.4
CDH3-204ENST00000565453 FGF18O76093 207 aa17.54■□□□□ 0.4
CDH3-204ENST00000565453 CENPBP07199 599 aaPredicted RBP17.54■□□□□ 0.4
CDH3-204ENST00000565453 LAG3P18627 525 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms