RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 TSHZ1Q6ZSZ6 1077 aa17.77■□□□□ 0.44
RAB40C-208ENST00000564703 LINC01465Q8N7H1 131 aa17.77■□□□□ 0.44
RAB40C-208ENST00000564703 MCPH1Q8NEM0 835 aa17.77■□□□□ 0.44
RAB40C-208ENST00000564703 PRPF31Q8WWY3 499 aaKnown RBP17.77■□□□□ 0.44
RAB40C-208ENST00000564703 CLIC6Q96NY7 704 aa17.77■□□□□ 0.44
RAB40C-208ENST00000564703 GCOM2Q9BZD3 368 aaPredicted RBP17.77■□□□□ 0.44
RAB40C-208ENST00000564703 SLC4A7Q9Y6M7 1214 aa17.77■□□□□ 0.44
RAB40C-208ENST00000564703 SCN5AQ14524 2016 aa17.77■□□□□ 0.43
RAB40C-208ENST00000564703 CUTAO60888 179 aa17.76■□□□□ 0.43
RAB40C-208ENST00000564703 GPR32O75388 356 aa17.76■□□□□ 0.43
RAB40C-208ENST00000564703 RPS6KA5O75582 802 aa17.76■□□□□ 0.43
RAB40C-208ENST00000564703 BAIAP3O94812 1187 aa17.76■□□□□ 0.43
RAB40C-208ENST00000564703 CYP11B2P19099 503 aa17.76■□□□□ 0.43
RAB40C-208ENST00000564703 KCNJ6P48051 423 aa17.76■□□□□ 0.43
RAB40C-208ENST00000564703 NFX1Q12986 1120 aaKnown RBP17.76■□□□□ 0.43
RAB40C-208ENST00000564703 MKRN4PQ13434 485 aaPredicted RBP17.76■□□□□ 0.43
RAB40C-208ENST00000564703 TFDP1Q14186 410 aa17.76■□□□□ 0.43
RAB40C-208ENST00000564703 LPIN1Q14693 890 aa17.76■□□□□ 0.43
RAB40C-208ENST00000564703 PLEKHG4Q58EX7 1191 aa17.76■□□□□ 0.43
RAB40C-208ENST00000564703 FAM43BQ6ZT52 329 aaPredicted RBP17.76■□□□□ 0.43
RAB40C-208ENST00000564703 MAEAQ7L5Y9 396 aa17.76■□□□□ 0.43
RAB40C-208ENST00000564703 EPSTI1Q96J88 318 aa17.76■□□□□ 0.43
RAB40C-208ENST00000564703 SPATA32Q96LK8 384 aa17.76■□□□□ 0.43
RAB40C-208ENST00000564703 OSMRQ99650 979 aa17.76■□□□□ 0.43
RAB40C-208ENST00000564703 SCAND2PQ9GZW5 306 aaPredicted RBP17.76■□□□□ 0.43
RAB40C-208ENST00000564703 CDHR5Q9HBB8 845 aa17.76■□□□□ 0.43
RAB40C-208ENST00000564703 RCOR1Q9UKL0 485 aa17.76■□□□□ 0.43
RAB40C-208ENST00000564703 COL4A3BPQ9Y5P4 624 aa17.76■□□□□ 0.43
RAB40C-208ENST00000564703 SRGAP2CP0DJJ0 459 aa17.75■□□□□ 0.43
RAB40C-208ENST00000564703 EIF4BP23588 611 aaKnown RBP17.75■□□□□ 0.43
RAB40C-208ENST00000564703 GPC3P51654 580 aa17.75■□□□□ 0.43
RAB40C-208ENST00000564703 PAK2Q13177 524 aa17.75■□□□□ 0.43
RAB40C-208ENST00000564703 GRB10Q13322 594 aa17.75■□□□□ 0.43
RAB40C-208ENST00000564703 DRP2Q13474 957 aa17.75■□□□□ 0.43
RAB40C-208ENST00000564703 KARSQ15046 597 aaKnown RBP17.75■□□□□ 0.43
RAB40C-208ENST00000564703 FAM102BQ5T8I3 360 aa17.75■□□□□ 0.43
RAB40C-208ENST00000564703 ZNF410Q86VK4 478 aa17.75■□□□□ 0.43
RAB40C-208ENST00000564703 SYMPKQ92797 1274 aaKnown RBP17.75■□□□□ 0.43
RAB40C-208ENST00000564703 ZNF668Q96K58 619 aaPredicted RBP17.75■□□□□ 0.43
RAB40C-208ENST00000564703 NLRP4Q96MN2 994 aa17.75■□□□□ 0.43
RAB40C-208ENST00000564703 PNMA5Q96PV4 448 aa17.75■□□□□ 0.43
RAB40C-208ENST00000564703 ADAMTS10Q9H324 1103 aa17.75■□□□□ 0.43
RAB40C-208ENST00000564703 CIZ1Q9ULV3 898 aaPredicted RBP17.75■□□□□ 0.43
RAB40C-208ENST00000564703 A0A087WZ62 844 aa17.74■□□□□ 0.43
RAB40C-208ENST00000564703 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.74■□□□□ 0.43
RAB40C-208ENST00000564703 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.74■□□□□ 0.43
RAB40C-208ENST00000564703 CD52P31358 61 aa17.74■□□□□ 0.43
RAB40C-208ENST00000564703 LAMTOR4Q0VGL1 99 aa17.74■□□□□ 0.43
RAB40C-208ENST00000564703 RRAGBQ5VZM2 374 aa17.74■□□□□ 0.43
RAB40C-208ENST00000564703 FDXACB1Q9BRP7 624 aaPredicted RBP17.74■□□□□ 0.43
RAB40C-208ENST00000564703 FTHL17Q9BXU8 183 aa17.74■□□□□ 0.43
RAB40C-208ENST00000564703 PADI3Q9ULW8 664 aa17.74■□□□□ 0.43
RAB40C-208ENST00000564703 NOC2LQ9Y3T9 749 aaKnown RBP17.74■□□□□ 0.43
RAB40C-208ENST00000564703 MYH15Q9Y2K3 1946 aa17.74■□□□□ 0.43
RAB40C-208ENST00000564703 TET1Q8NFU7 2136 aa17.74■□□□□ 0.43
RAB40C-208ENST00000564703 PLA2G4BP0C869 781 aa17.73■□□□□ 0.43
RAB40C-208ENST00000564703 DDIT3P35638 169 aa17.73■□□□□ 0.43
RAB40C-208ENST00000564703 TMEM119Q4V9L6 283 aa17.73■□□□□ 0.43
RAB40C-208ENST00000564703 HABP4Q5JVS0 413 aaKnown RBP17.73■□□□□ 0.43
RAB40C-208ENST00000564703 CCDC73Q6ZRK6 1079 aa17.73■□□□□ 0.43
RAB40C-208ENST00000564703 USP49Q70CQ1 688 aa17.73■□□□□ 0.43
RAB40C-208ENST00000564703 KSR1Q8IVT5 923 aa17.73■□□□□ 0.43
RAB40C-208ENST00000564703 SYT2Q8N9I0 419 aaPredicted RBP17.73■□□□□ 0.43
RAB40C-208ENST00000564703 RNF149Q8NC42 400 aa17.73■□□□□ 0.43
RAB40C-208ENST00000564703 VWCEQ96DN2 955 aa17.73■□□□□ 0.43
RAB40C-208ENST00000564703 IFT74Q96LB3 600 aa17.73■□□□□ 0.43
RAB40C-208ENST00000564703 PANK2Q9BZ23 570 aa17.73■□□□□ 0.43
RAB40C-208ENST00000564703 POLR3FQ9H1D9 316 aaPredicted RBP17.73■□□□□ 0.43
RAB40C-208ENST00000564703 AGO3Q9H9G7 860 aaKnown RBP17.73■□□□□ 0.43
RAB40C-208ENST00000564703 XPNPEP1Q9NQW7 623 aa17.73■□□□□ 0.43
RAB40C-208ENST00000564703 FAM13BQ9NYF5 915 aa17.73■□□□□ 0.43
RAB40C-208ENST00000564703 PCDHA7Q9UN72 937 aa17.73■□□□□ 0.43
RAB40C-208ENST00000564703 RBM19Q9Y4C8 960 aaKnown RBP17.73■□□□□ 0.43
RAB40C-208ENST00000564703 TANC1Q9C0D5 1861 aa17.73■□□□□ 0.43
RAB40C-208ENST00000564703 AMHP03971 560 aa17.72■□□□□ 0.43
RAB40C-208ENST00000564703 DARSP14868 501 aaKnown RBP17.72■□□□□ 0.43
RAB40C-208ENST00000564703 ZSCAN20P17040 1043 aaPredicted RBP17.72■□□□□ 0.43
RAB40C-208ENST00000564703 PLCG1P19174 1290 aa17.72■□□□□ 0.43
RAB40C-208ENST00000564703 ARL2P36404 184 aa17.72■□□□□ 0.43
RAB40C-208ENST00000564703 PHKA2P46019 1235 aa17.72■□□□□ 0.43
RAB40C-208ENST00000564703 NCBP1Q09161 790 aaKnown RBP17.72■□□□□ 0.43
RAB40C-208ENST00000564703 DHX8Q14562 1220 aaKnown RBP17.72■□□□□ 0.43
RAB40C-208ENST00000564703 PPP2R5AQ15172 486 aa17.72■□□□□ 0.43
RAB40C-208ENST00000564703 LRIT3Q3SXY7 679 aa17.72■□□□□ 0.43
RAB40C-208ENST00000564703 RINT1Q6NUQ1 792 aa17.72■□□□□ 0.43
RAB40C-208ENST00000564703 KCNK18Q7Z418 384 aa17.72■□□□□ 0.43
RAB40C-208ENST00000564703 SRGAP1Q7Z6B7 1085 aa17.72■□□□□ 0.43
RAB40C-208ENST00000564703 PHOSPHO2Q8TCD6 241 aa17.72■□□□□ 0.43
RAB40C-208ENST00000564703 KIFAP3Q92845 792 aa17.72■□□□□ 0.43
RAB40C-208ENST00000564703 TIPINQ9BVW5 301 aa17.72■□□□□ 0.43
RAB40C-208ENST00000564703 OSBPL7Q9BZF2 842 aa17.72■□□□□ 0.43
RAB40C-208ENST00000564703 KCND2Q9NZV8 630 aa17.72■□□□□ 0.43
RAB40C-208ENST00000564703 CXXC1Q9P0U4 656 aaPredicted RBP17.72■□□□□ 0.43
RAB40C-208ENST00000564703 KCNG1Q9UIX4 513 aa17.72■□□□□ 0.43
RAB40C-208ENST00000564703 ST3GAL5Q9UNP4 418 aa17.72■□□□□ 0.43
RAB40C-208ENST00000564703 LOXHD1Q8IVV2 1947 aa17.71■□□□□ 0.43
RAB40C-208ENST00000564703 DENND3A2RUS2 1198 aa17.71■□□□□ 0.43
RAB40C-208ENST00000564703 KRT18P05783 430 aaKnown RBP17.71■□□□□ 0.43
RAB40C-208ENST00000564703 ATP2A2P16615 1042 aaKnown RBP17.71■□□□□ 0.43
RAB40C-208ENST00000564703 SFPQP23246 707 aaKnown RBP eCLIP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms