RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 SIP14410 1827 aa11.09□□□□□ -0.63
CDH1-206ENST00000564676 A0A087WWV3 80 aa11.09□□□□□ -0.63
CDH1-206ENST00000564676 MED24O75448 989 aa11.09□□□□□ -0.63
CDH1-206ENST00000564676 SPATA31C1P0DKV0 1188 aa11.09□□□□□ -0.63
CDH1-206ENST00000564676 XRCC6P12956 609 aaKnown RBP eCLIP11.09□□□□□ -0.63
CDH1-206ENST00000564676 SYT1P21579 422 aa11.09□□□□□ -0.63
CDH1-206ENST00000564676 IBSPP21815 317 aaPredicted RBP11.09□□□□□ -0.63
CDH1-206ENST00000564676 EIF4BP23588 611 aaKnown RBP11.09□□□□□ -0.63
CDH1-206ENST00000564676 CCT6AP40227 531 aaKnown RBP11.09□□□□□ -0.63
CDH1-206ENST00000564676 GPC3P51654 580 aa11.09□□□□□ -0.63
CDH1-206ENST00000564676 GRIN2CQ14957 1233 aa11.09□□□□□ -0.63
CDH1-206ENST00000564676 EMC2Q15006 297 aa11.09□□□□□ -0.63
CDH1-206ENST00000564676 HAUS3Q68CZ6 603 aa11.09□□□□□ -0.63
CDH1-206ENST00000564676 BRAPQ7Z569 592 aa11.09□□□□□ -0.63
CDH1-206ENST00000564676 CATSPER3Q86XQ3 398 aa11.09□□□□□ -0.63
CDH1-206ENST00000564676 RHPN2Q8IUC4 686 aa11.09□□□□□ -0.63
CDH1-206ENST00000564676 PIGOQ8TEQ8 1089 aa11.09□□□□□ -0.63
CDH1-206ENST00000564676 TMEM40Q8WWA1 233 aa11.09□□□□□ -0.63
CDH1-206ENST00000564676 SLC39A7Q92504 469 aa11.09□□□□□ -0.63
CDH1-206ENST00000564676 TOP1MTQ969P6 601 aa11.09□□□□□ -0.63
CDH1-206ENST00000564676 TMEM143Q96AN5 459 aa11.09□□□□□ -0.63
CDH1-206ENST00000564676 GUCD1Q96NT3 240 aa11.09□□□□□ -0.63
CDH1-206ENST00000564676 NACC1Q96RE7 527 aa11.09□□□□□ -0.63
CDH1-206ENST00000564676 YME1L1Q96TA2 773 aa11.09□□□□□ -0.63
CDH1-206ENST00000564676 CDX2Q99626 313 aaPredicted RBP11.09□□□□□ -0.63
CDH1-206ENST00000564676 POLR3CQ9BUI4 534 aaPredicted RBP11.09□□□□□ -0.63
CDH1-206ENST00000564676 GCOM2Q9BZD3 368 aaPredicted RBP11.09□□□□□ -0.63
CDH1-206ENST00000564676 ADAMTS10Q9H324 1103 aa11.09□□□□□ -0.63
CDH1-206ENST00000564676 DHX33Q9H6R0 707 aaKnown RBP11.09□□□□□ -0.63
CDH1-206ENST00000564676 ERVK-5Q9HDB9 667 aa11.09□□□□□ -0.63
CDH1-206ENST00000564676 LRWD1Q9UFC0 647 aa11.09□□□□□ -0.63
CDH1-206ENST00000564676 ST3GAL5Q9UNP4 418 aa11.09□□□□□ -0.63
CDH1-206ENST00000564676 INSL6Q9Y581 213 aa11.09□□□□□ -0.63
CDH1-206ENST00000564676 STK24Q9Y6E0 443 aa11.09□□□□□ -0.63
CDH1-206ENST00000564676 DENND3A2RUS2 1198 aa11.08□□□□□ -0.64
CDH1-206ENST00000564676 GAS2O43903 313 aaKnown RBP11.08□□□□□ -0.64
CDH1-206ENST00000564676 RPA1P27694 616 aa11.08□□□□□ -0.64
CDH1-206ENST00000564676 PRPHP41219 470 aa11.08□□□□□ -0.64
CDH1-206ENST00000564676 ATP2C1P98194 919 aaPredicted RBP11.08□□□□□ -0.64
CDH1-206ENST00000564676 PDIA5Q14554 519 aa11.08□□□□□ -0.64
CDH1-206ENST00000564676 KRT79Q5XKE5 535 aa11.08□□□□□ -0.64
CDH1-206ENST00000564676 FAM43BQ6ZT52 329 aaPredicted RBP11.08□□□□□ -0.64
CDH1-206ENST00000564676 RTN4RL1Q86UN2 441 aaPredicted RBP11.08□□□□□ -0.64
CDH1-206ENST00000564676 FAM228AQ86W67 206 aa11.08□□□□□ -0.64
CDH1-206ENST00000564676 TCP11Q8WWU5 503 aa11.08□□□□□ -0.64
CDH1-206ENST00000564676 PSPC1Q8WXF1 523 aaKnown RBP11.08□□□□□ -0.64
CDH1-206ENST00000564676 MYLIPQ8WY64 445 aa11.08□□□□□ -0.64
CDH1-206ENST00000564676 NLRP4Q96MN2 994 aa11.08□□□□□ -0.64
CDH1-206ENST00000564676 MTRQ99707 1265 aa11.08□□□□□ -0.64
CDH1-206ENST00000564676 TMX1Q9H3N1 280 aa11.08□□□□□ -0.64
CDH1-206ENST00000564676 CERS4Q9HA82 394 aa11.08□□□□□ -0.64
CDH1-206ENST00000564676 ATP6V0A4Q9HBG4 840 aa11.08□□□□□ -0.64
CDH1-206ENST00000564676 COL4A3BPQ9Y5P4 624 aa11.08□□□□□ -0.64
CDH1-206ENST00000564676 TTC3P53804 2025 aa11.08□□□□□ -0.64
CDH1-206ENST00000564676 PTPRSQ13332 1948 aa11.07□□□□□ -0.64
CDH1-206ENST00000564676 A0A087WZ62 844 aa11.07□□□□□ -0.64
CDH1-206ENST00000564676 LCHNA4D1U4 455 aa11.07□□□□□ -0.64
CDH1-206ENST00000564676 ASAP2O43150 1006 aa11.07□□□□□ -0.64
CDH1-206ENST00000564676 DGAT1O75907 488 aa11.07□□□□□ -0.64
CDH1-206ENST00000564676 BMP15O95972 392 aa11.07□□□□□ -0.64
CDH1-206ENST00000564676 SRGAP2CP0DJJ0 459 aa11.07□□□□□ -0.64
CDH1-206ENST00000564676 DARSP14868 501 aaKnown RBP11.07□□□□□ -0.64
CDH1-206ENST00000564676 ZSCAN20P17040 1043 aaPredicted RBP11.07□□□□□ -0.64
CDH1-206ENST00000564676 RARRES1P49788 294 aa11.07□□□□□ -0.64
CDH1-206ENST00000564676 NUBP1P53384 320 aa11.07□□□□□ -0.64
CDH1-206ENST00000564676 TAP1Q03518 808 aa11.07□□□□□ -0.64
CDH1-206ENST00000564676 IL17AQ16552 155 aa11.07□□□□□ -0.64
CDH1-206ENST00000564676 POTEGQ6S5H5 508 aa11.07□□□□□ -0.64
CDH1-206ENST00000564676 ZNF410Q86VK4 478 aa11.07□□□□□ -0.64
CDH1-206ENST00000564676 KSR1Q8IVT5 923 aa11.07□□□□□ -0.64
CDH1-206ENST00000564676 SNX29Q8TEQ0 813 aa11.07□□□□□ -0.64
CDH1-206ENST00000564676 PRPF31Q8WWY3 499 aaKnown RBP11.07□□□□□ -0.64
CDH1-206ENST00000564676 LINC01599Q8WXQ3 324 aa11.07□□□□□ -0.64
CDH1-206ENST00000564676 ARNTL2Q8WYA1 636 aa11.07□□□□□ -0.64
CDH1-206ENST00000564676 GAS2L1Q99501 681 aaPredicted RBP11.07□□□□□ -0.64
CDH1-206ENST00000564676 ADAM2Q99965 735 aa11.07□□□□□ -0.64
CDH1-206ENST00000564676 FDXACB1Q9BRP7 624 aaPredicted RBP11.07□□□□□ -0.64
CDH1-206ENST00000564676 INO80BQ9C086 356 aaPredicted RBP11.07□□□□□ -0.64
CDH1-206ENST00000564676 PRDM12Q9H4Q4 367 aa11.07□□□□□ -0.64
CDH1-206ENST00000564676 LRFN2Q9ULH4 789 aa11.07□□□□□ -0.64
CDH1-206ENST00000564676 KIAA1024Q9UPX6 916 aa11.07□□□□□ -0.64
CDH1-206ENST00000564676 STXBP5LQ9Y2K9 1186 aa11.07□□□□□ -0.64
CDH1-206ENST00000564676 SZT2Q5T011 3432 aa11.07□□□□□ -0.64
CDH1-206ENST00000564676 LAMA2P24043 3122 aaKnown RBP11.06□□□□□ -0.64
CDH1-206ENST00000564676 ARHGEF35A5YM69 484 aa11.06□□□□□ -0.64
CDH1-206ENST00000564676 VWA3AA6NCI4 1184 aa11.06□□□□□ -0.64
CDH1-206ENST00000564676 PP2D1A8MPX8 630 aa11.06□□□□□ -0.64
CDH1-206ENST00000564676 ATMINO43313 823 aaPredicted RBP11.06□□□□□ -0.64
CDH1-206ENST00000564676 STX6O43752 255 aa11.06□□□□□ -0.64
CDH1-206ENST00000564676 MGEA5O60502 916 aa11.06□□□□□ -0.64
CDH1-206ENST00000564676 USO1O60763 962 aaKnown RBP11.06□□□□□ -0.64
CDH1-206ENST00000564676 CSDE1O75534 798 aaKnown RBP11.06□□□□□ -0.64
CDH1-206ENST00000564676 ARHGEF15O94989 841 aa11.06□□□□□ -0.64
CDH1-206ENST00000564676 STAG3L1P0CL83 205 aa11.06□□□□□ -0.64
CDH1-206ENST00000564676 C7P10643 843 aa11.06□□□□□ -0.64
CDH1-206ENST00000564676 FOSL2P15408 326 aa11.06□□□□□ -0.64
CDH1-206ENST00000564676 MUTP22033 750 aa11.06□□□□□ -0.64
CDH1-206ENST00000564676 FGFR4P22455 802 aa11.06□□□□□ -0.64
CDH1-206ENST00000564676 HTRA4P83105 476 aaPredicted RBP11.06□□□□□ -0.64
CDH1-206ENST00000564676 LAMTOR4Q0VGL1 99 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms