RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 DARSP14868 501 aaKnown RBP16.86■□□□□ 0.29
SPG7-210ENST00000564409 LAG3P18627 525 aa16.86■□□□□ 0.29
SPG7-210ENST00000564409 COL9A1P20849 921 aa16.86■□□□□ 0.29
SPG7-210ENST00000564409 LTBRP36941 435 aa16.86■□□□□ 0.29
SPG7-210ENST00000564409 PSMC5P62195 406 aa16.86■□□□□ 0.29
SPG7-210ENST00000564409 CAMK1Q14012 370 aa16.86■□□□□ 0.29
SPG7-210ENST00000564409 SPOUT1Q5T280 376 aaKnown RBP16.86■□□□□ 0.29
SPG7-210ENST00000564409 EP400NLQ6ZTU2 488 aa16.86■□□□□ 0.29
SPG7-210ENST00000564409 SCLT1Q96NL6 688 aa16.86■□□□□ 0.29
SPG7-210ENST00000564409 PPP1R16BQ96T49 567 aa16.86■□□□□ 0.29
SPG7-210ENST00000564409 GCOM2Q9BZD3 368 aaPredicted RBP16.86■□□□□ 0.29
SPG7-210ENST00000564409 INO80BQ9C086 356 aaPredicted RBP16.86■□□□□ 0.29
SPG7-210ENST00000564409 TMEM117Q9H0C3 514 aa16.86■□□□□ 0.29
SPG7-210ENST00000564409 KCNMB3Q9NPA1 279 aa16.86■□□□□ 0.29
SPG7-210ENST00000564409 CHST12Q9NRB3 414 aa16.86■□□□□ 0.29
SPG7-210ENST00000564409 SEPT9Q9UHD8 586 aaPredicted RBP16.86■□□□□ 0.29
SPG7-210ENST00000564409 TPCN1Q9ULQ1 816 aa16.86■□□□□ 0.29
SPG7-210ENST00000564409 KCNJ14Q9UNX9 436 aa16.86■□□□□ 0.29
SPG7-210ENST00000564409 CARNS1A5YM72 827 aa16.85■□□□□ 0.29
SPG7-210ENST00000564409 PI4K2BG5E9Z4 385 aa16.85■□□□□ 0.29
SPG7-210ENST00000564409 ADAM15Q13444 863 aa16.85■□□□□ 0.29
SPG7-210ENST00000564409 LETM2Q2VYF4 491 aa16.85■□□□□ 0.29
SPG7-210ENST00000564409 FAM102BQ5T8I3 360 aa16.85■□□□□ 0.29
SPG7-210ENST00000564409 ZNF410Q86VK4 478 aa16.85■□□□□ 0.29
SPG7-210ENST00000564409 POF1BQ8WVV4 589 aa16.85■□□□□ 0.29
SPG7-210ENST00000564409 BRMS1Q9HCU9 246 aa16.85■□□□□ 0.29
SPG7-210ENST00000564409 ORC3Q9UBD5 711 aaPredicted RBP16.85■□□□□ 0.29
SPG7-210ENST00000564409 LZTS1Q9Y250 596 aa16.85■□□□□ 0.29
SPG7-210ENST00000564409 A0A0U1RQF3 1178 aa16.84■□□□□ 0.29
SPG7-210ENST00000564409 DDX11L8A8MPP1 907 aa16.84■□□□□ 0.29
SPG7-210ENST00000564409 GPR37L1O60883 481 aa16.84■□□□□ 0.29
SPG7-210ENST00000564409 MAFO75444 373 aaPredicted RBP16.84■□□□□ 0.29
SPG7-210ENST00000564409 STBD1O95210 358 aa16.84■□□□□ 0.29
SPG7-210ENST00000564409 IL9P15248 144 aa16.84■□□□□ 0.29
SPG7-210ENST00000564409 QARSP47897 775 aaKnown RBP16.84■□□□□ 0.29
SPG7-210ENST00000564409 GATMP50440 423 aa16.84■□□□□ 0.29
SPG7-210ENST00000564409 MTERF2Q49AM1 385 aa16.84■□□□□ 0.29
SPG7-210ENST00000564409 ECHDC2Q86YB7 292 aa16.84■□□□□ 0.29
SPG7-210ENST00000564409 SLFN12Q8IYM2 578 aa16.84■□□□□ 0.29
SPG7-210ENST00000564409 ABI1Q8IZP0 508 aa16.84■□□□□ 0.29
SPG7-210ENST00000564409 EFHBQ8N7U6 833 aa16.84■□□□□ 0.29
SPG7-210ENST00000564409 COLGALT1Q8NBJ5 622 aa16.84■□□□□ 0.29
SPG7-210ENST00000564409 NLRP7Q8WX94 980 aa16.84■□□□□ 0.29
SPG7-210ENST00000564409 GJA10Q969M2 543 aa16.84■□□□□ 0.29
SPG7-210ENST00000564409 CEP89Q96ST8 783 aa16.84■□□□□ 0.29
SPG7-210ENST00000564409 POP1Q99575 1024 aaKnown RBP16.84■□□□□ 0.29
SPG7-210ENST00000564409 TRAIPQ9BWF2 469 aa16.84■□□□□ 0.29
SPG7-210ENST00000564409 TYW1Q9NV66 732 aaKnown RBP16.84■□□□□ 0.29
SPG7-210ENST00000564409 SLC37A4O43826 429 aa16.83■□□□□ 0.28
SPG7-210ENST00000564409 FGF18O76093 207 aa16.83■□□□□ 0.28
SPG7-210ENST00000564409 BAG4O95429 457 aaKnown RBP16.83■□□□□ 0.28
SPG7-210ENST00000564409 P4HBP07237 508 aaKnown RBP16.83■□□□□ 0.28
SPG7-210ENST00000564409 SKIP12755 728 aa16.83■□□□□ 0.28
SPG7-210ENST00000564409 ALADP13716 330 aa16.83■□□□□ 0.28
SPG7-210ENST00000564409 IBSPP21815 317 aaPredicted RBP16.83■□□□□ 0.28
SPG7-210ENST00000564409 SFPQP23246 707 aaKnown RBP eCLIP16.83■□□□□ 0.28
SPG7-210ENST00000564409 DNAJB1P25685 340 aa16.83■□□□□ 0.28
SPG7-210ENST00000564409 SSTR3P32745 418 aaPredicted RBP16.83■□□□□ 0.28
SPG7-210ENST00000564409 PPM1AP35813 382 aa16.83■□□□□ 0.28
SPG7-210ENST00000564409 AK2P54819 239 aa16.83■□□□□ 0.28
SPG7-210ENST00000564409 SMAD4Q13485 552 aaKnown RBP16.83■□□□□ 0.28
SPG7-210ENST00000564409 SMAD2Q15796 467 aaKnown RBP16.83■□□□□ 0.28
SPG7-210ENST00000564409 TMEM31Q5JXX7 168 aa16.83■□□□□ 0.28
SPG7-210ENST00000564409 ADHFE1Q8IWW8 467 aa16.83■□□□□ 0.28
SPG7-210ENST00000564409 THNSL1Q8IYQ7 743 aa16.83■□□□□ 0.28
SPG7-210ENST00000564409 LRRC43Q8N309 656 aa16.83■□□□□ 0.28
SPG7-210ENST00000564409 CDCA3Q99618 268 aaPredicted RBP16.83■□□□□ 0.28
SPG7-210ENST00000564409 EPHX3Q9H6B9 360 aa16.83■□□□□ 0.28
SPG7-210ENST00000564409 CD320Q9NPF0 282 aa16.83■□□□□ 0.28
SPG7-210ENST00000564409 TLR9Q9NR96 1032 aa16.83■□□□□ 0.28
SPG7-210ENST00000564409 PUF60Q9UHX1 559 aaKnown RBP16.83■□□□□ 0.28
SPG7-210ENST00000564409 CD207Q9UJ71 328 aa16.83■□□□□ 0.28
SPG7-210ENST00000564409 VAV3Q9UKW4 847 aa16.83■□□□□ 0.28
SPG7-210ENST00000564409 ARIH1Q9Y4X5 557 aaPredicted RBP16.83■□□□□ 0.28
SPG7-210ENST00000564409 GAS2O43903 313 aaKnown RBP16.82■□□□□ 0.28
SPG7-210ENST00000564409 MARCH6O60337 910 aa16.82■□□□□ 0.28
SPG7-210ENST00000564409 CCNT1O60563 726 aaKnown RBP16.82■□□□□ 0.28
SPG7-210ENST00000564409 FGFR1P11362 822 aa16.82■□□□□ 0.28
SPG7-210ENST00000564409 PLCB3Q01970 1234 aa16.82■□□□□ 0.28
SPG7-210ENST00000564409 ZP2Q05996 745 aa16.82■□□□□ 0.28
SPG7-210ENST00000564409 EPHA7Q15375 998 aa16.82■□□□□ 0.28
SPG7-210ENST00000564409 PIK3AP1Q6ZUJ8 805 aa16.82■□□□□ 0.28
SPG7-210ENST00000564409 ANO5Q75V66 913 aa16.82■□□□□ 0.28
SPG7-210ENST00000564409 SLC7A3Q8WY07 619 aa16.82■□□□□ 0.28
SPG7-210ENST00000564409 CASD1Q96PB1 797 aa16.82■□□□□ 0.28
SPG7-210ENST00000564409 MRPL9Q9BYD2 267 aaKnown RBP16.82■□□□□ 0.28
SPG7-210ENST00000564409 IGFLR1Q9H665 355 aa16.82■□□□□ 0.28
SPG7-210ENST00000564409 CWH43Q9H720 699 aa16.82■□□□□ 0.28
SPG7-210ENST00000564409 SUCLA2Q9P2R7 463 aaPredicted RBP16.82■□□□□ 0.28
SPG7-210ENST00000564409 C19orf67A6NJJ6 358 aa16.81■□□□□ 0.28
SPG7-210ENST00000564409 TBX10O75333 385 aa16.81■□□□□ 0.28
SPG7-210ENST00000564409 CTDNEP1O95476 244 aa16.81■□□□□ 0.28
SPG7-210ENST00000564409 EYA4O95677 639 aa16.81■□□□□ 0.28
SPG7-210ENST00000564409 KRT2P35908 639 aa16.81■□□□□ 0.28
SPG7-210ENST00000564409 RFC5P40937 340 aa16.81■□□□□ 0.28
SPG7-210ENST00000564409 NDUFV1P49821 464 aa16.81■□□□□ 0.28
SPG7-210ENST00000564409 KRT17Q04695 432 aa16.81■□□□□ 0.28
SPG7-210ENST00000564409 COASYQ13057 564 aa16.81■□□□□ 0.28
SPG7-210ENST00000564409 OTUD6AQ7L8S5 288 aa16.81■□□□□ 0.28
SPG7-210ENST00000564409 ZNF598Q86UK7 904 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms