RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 CYP26B1Q9NR63 512 aa16.6■□□□□ 0.25
SNX29-203ENST00000564111 HAS1Q92839 578 aa16.59■□□□□ 0.25
SNX29-203ENST00000564111 HLA-CQ95604 372 aa16.59■□□□□ 0.25
SNX29-203ENST00000564111 CCDC43Q96MW1 224 aaKnown RBP16.59■□□□□ 0.25
SNX29-203ENST00000564111 ADAM2Q99965 735 aa16.59■□□□□ 0.25
SNX29-203ENST00000564111 PCDHA12Q9UN75 941 aa16.59■□□□□ 0.25
SNX29-203ENST00000564111 BTBD18B2RXH4 712 aa16.58■□□□□ 0.25
SNX29-203ENST00000564111 RFXAPO00287 272 aa16.58■□□□□ 0.25
SNX29-203ENST00000564111 STBD1O95210 358 aa16.58■□□□□ 0.25
SNX29-203ENST00000564111 FAM189BP81408 668 aa16.58■□□□□ 0.25
SNX29-203ENST00000564111 DSC3Q14574 896 aa16.58■□□□□ 0.25
SNX29-203ENST00000564111 CRIPAKQ8N1N5 446 aa16.58■□□□□ 0.25
SNX29-203ENST00000564111 LRRC71Q8N4P6 559 aa16.58■□□□□ 0.25
SNX29-203ENST00000564111 ERMNQ8TAM6 284 aa16.58■□□□□ 0.25
SNX29-203ENST00000564111 LXNQ9BS40 222 aa16.58■□□□□ 0.25
SNX29-203ENST00000564111 NSUN3Q9H649 340 aaKnown RBP16.58■□□□□ 0.25
SNX29-203ENST00000564111 ANKEF1Q9NU02 776 aa16.58■□□□□ 0.25
SNX29-203ENST00000564111 MTUS1Q9ULD2 1270 aa16.58■□□□□ 0.25
SNX29-203ENST00000564111 C9IYK1 514 aa16.58■□□□□ 0.24
SNX29-203ENST00000564111 RAB27AP51159 221 aa16.58■□□□□ 0.24
SNX29-203ENST00000564111 POLGP54098 1239 aaPredicted RBP16.58■□□□□ 0.24
SNX29-203ENST00000564111 CEP170P1Q96L14 293 aa16.58■□□□□ 0.24
SNX29-203ENST00000564111 SUCLA2Q9P2R7 463 aaPredicted RBP16.58■□□□□ 0.24
SNX29-203ENST00000564111 MYO9BQ13459 2157 aa16.58■□□□□ 0.24
SNX29-203ENST00000564111 XRCC6P12956 609 aaKnown RBP eCLIP16.57■□□□□ 0.24
SNX29-203ENST00000564111 MUTP22033 750 aa16.57■□□□□ 0.24
SNX29-203ENST00000564111 UBE3AQ05086 875 aa16.57■□□□□ 0.24
SNX29-203ENST00000564111 RTN4RL1Q86UN2 441 aaPredicted RBP16.57■□□□□ 0.24
SNX29-203ENST00000564111 FBXO18Q8NFZ0 1043 aa16.57■□□□□ 0.24
SNX29-203ENST00000564111 PSPC1Q8WXF1 523 aaKnown RBP16.57■□□□□ 0.24
SNX29-203ENST00000564111 CEP89Q96ST8 783 aa16.57■□□□□ 0.24
SNX29-203ENST00000564111 EML1O00423 815 aa16.57■□□□□ 0.24
SNX29-203ENST00000564111 EOMESO95936 686 aa16.57■□□□□ 0.24
SNX29-203ENST00000564111 LAG3P18627 525 aa16.57■□□□□ 0.24
SNX29-203ENST00000564111 YWHABP31946 246 aaKnown RBP16.57■□□□□ 0.24
SNX29-203ENST00000564111 SPIRE1Q08AE8 756 aa16.57■□□□□ 0.24
SNX29-203ENST00000564111 ST3GAL1Q11201 340 aa16.57■□□□□ 0.24
SNX29-203ENST00000564111 TMEM266Q2M3C6 531 aa16.57■□□□□ 0.24
SNX29-203ENST00000564111 ANO5Q75V66 913 aa16.57■□□□□ 0.24
SNX29-203ENST00000564111 SRGAP1Q7Z6B7 1085 aa16.57■□□□□ 0.24
SNX29-203ENST00000564111 TRAIPQ9BWF2 469 aa16.57■□□□□ 0.24
SNX29-203ENST00000564111 MRPL9Q9BYD2 267 aaKnown RBP16.57■□□□□ 0.24
SNX29-203ENST00000564111 TMEM117Q9H0C3 514 aa16.57■□□□□ 0.24
SNX29-203ENST00000564111 TUFT1Q9NNX1 390 aa16.57■□□□□ 0.24
SNX29-203ENST00000564111 GJB4Q9NTQ9 266 aa16.57■□□□□ 0.24
SNX29-203ENST00000564111 FAM50BQ9Y247 325 aa16.57■□□□□ 0.24
SNX29-203ENST00000564111 PCDHB12Q9Y5F1 795 aa16.57■□□□□ 0.24
SNX29-203ENST00000564111 LAMA3Q16787 3333 aa16.56■□□□□ 0.24
SNX29-203ENST00000564111 TFDP1Q14186 410 aa16.56■□□□□ 0.24
SNX29-203ENST00000564111 PDE12Q6L8Q7 609 aaKnown RBP16.56■□□□□ 0.24
SNX29-203ENST00000564111 TMEM40Q8WWA1 233 aa16.56■□□□□ 0.24
SNX29-203ENST00000564111 GJA10Q969M2 543 aa16.56■□□□□ 0.24
SNX29-203ENST00000564111 KIF2CQ99661 725 aa16.56■□□□□ 0.24
SNX29-203ENST00000564111 DHX33Q9H6R0 707 aaKnown RBP16.56■□□□□ 0.24
SNX29-203ENST00000564111 MXD4Q14582 209 aaPredicted RBP16.55■□□□□ 0.24
SNX29-203ENST00000564111 TRMT1LQ7Z2T5 733 aaKnown RBP16.55■□□□□ 0.24
SNX29-203ENST00000564111 ABI1Q8IZP0 508 aa16.55■□□□□ 0.24
SNX29-203ENST00000564111 DYDC2Q96IM9 177 aa16.55■□□□□ 0.24
SNX29-203ENST00000564111 MTMR9Q96QG7 549 aa16.55■□□□□ 0.24
SNX29-203ENST00000564111 EIF2AK1Q9BQI3 630 aaKnown RBP16.55■□□□□ 0.24
SNX29-203ENST00000564111 RAB34Q9BZG1 259 aa16.55■□□□□ 0.24
SNX29-203ENST00000564111 TTC12Q9H892 705 aaPredicted RBP16.55■□□□□ 0.24
SNX29-203ENST00000564111 CDHR5Q9HBB8 845 aa16.55■□□□□ 0.24
SNX29-203ENST00000564111 EARS2Q5JPH6 523 aaKnown RBP16.55■□□□□ 0.24
SNX29-203ENST00000564111 NOSTRINQ8IVI9 506 aa16.55■□□□□ 0.24
SNX29-203ENST00000564111 LRRC43Q8N309 656 aa16.55■□□□□ 0.24
SNX29-203ENST00000564111 CCDC51Q96ER9 411 aa16.55■□□□□ 0.24
SNX29-203ENST00000564111 MTRQ99707 1265 aa16.55■□□□□ 0.24
SNX29-203ENST00000564111 COL4A3BPQ9Y5P4 624 aa16.55■□□□□ 0.24
SNX29-203ENST00000564111 MRPL42Q9Y6G3 142 aaKnown RBP16.55■□□□□ 0.24
SNX29-203ENST00000564111 LAD1O00515 517 aa16.54■□□□□ 0.24
SNX29-203ENST00000564111 OR52Z1P0C646 297 aa16.54■□□□□ 0.24
SNX29-203ENST00000564111 PPM1AP35813 382 aa16.54■□□□□ 0.24
SNX29-203ENST00000564111 POU5F1BQ06416 359 aa16.54■□□□□ 0.24
SNX29-203ENST00000564111 EMC2Q15006 297 aa16.54■□□□□ 0.24
SNX29-203ENST00000564111 XKR9Q5GH70 373 aa16.54■□□□□ 0.24
SNX29-203ENST00000564111 HAUS3Q68CZ6 603 aa16.54■□□□□ 0.24
SNX29-203ENST00000564111 SZT2Q5T011 3432 aa16.54■□□□□ 0.24
SNX29-203ENST00000564111 FAM205CA6NFA0 338 aa16.54■□□□□ 0.24
SNX29-203ENST00000564111 MGEA5O60502 916 aa16.54■□□□□ 0.24
SNX29-203ENST00000564111 DGAT1O75907 488 aa16.54■□□□□ 0.24
SNX29-203ENST00000564111 PHKA2P46019 1235 aa16.54■□□□□ 0.24
SNX29-203ENST00000564111 ECHDC2Q86YB7 292 aa16.54■□□□□ 0.24
SNX29-203ENST00000564111 RHPN2Q8IUC4 686 aa16.54■□□□□ 0.24
SNX29-203ENST00000564111 PPP1R16BQ96T49 567 aa16.54■□□□□ 0.24
SNX29-203ENST00000564111 POLR3CQ9BUI4 534 aaPredicted RBP16.54■□□□□ 0.24
SNX29-203ENST00000564111 ATG2AQ2TAZ0 1938 aa16.54■□□□□ 0.24
SNX29-203ENST00000564111 TBKBP1A7MCY6 615 aa16.53■□□□□ 0.24
SNX29-203ENST00000564111 AXLP30530 894 aa16.53■□□□□ 0.24
SNX29-203ENST00000564111 TXKP42681 527 aa16.53■□□□□ 0.24
SNX29-203ENST00000564111 FOSBP53539 338 aa16.53■□□□□ 0.24
SNX29-203ENST00000564111 NCBP1Q09161 790 aaKnown RBP16.53■□□□□ 0.24
SNX29-203ENST00000564111 TTC38Q5R3I4 469 aa16.53■□□□□ 0.24
SNX29-203ENST00000564111 SPOUT1Q5T280 376 aaKnown RBP16.53■□□□□ 0.24
SNX29-203ENST00000564111 PLA2G4FQ68DD2 849 aa16.53■□□□□ 0.24
SNX29-203ENST00000564111 TPH2Q8IWU9 490 aa16.53■□□□□ 0.24
SNX29-203ENST00000564111 PGBD4Q96DM1 585 aa16.53■□□□□ 0.24
SNX29-203ENST00000564111 UBE2ZQ9H832 354 aaPredicted RBP16.53■□□□□ 0.24
SNX29-203ENST00000564111 STK39Q9UEW8 545 aa16.53■□□□□ 0.24
SNX29-203ENST00000564111 LZTS1Q9Y250 596 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms