RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 XBP1P17861 261 aa19.37■□□□□ 0.69
VPS9D1-203ENST00000563798 PPP2R5CQ13362 524 aa19.37■□□□□ 0.69
VPS9D1-203ENST00000563798 ANKRD1Q15327 319 aa19.37■□□□□ 0.69
VPS9D1-203ENST00000563798 POF1BQ8WVV4 589 aa19.37■□□□□ 0.69
VPS9D1-203ENST00000563798 TMEM117Q9H0C3 514 aa19.37■□□□□ 0.69
VPS9D1-203ENST00000563798 CWH43Q9H720 699 aa19.37■□□□□ 0.69
VPS9D1-203ENST00000563798 TYW1Q9NV66 732 aaKnown RBP19.37■□□□□ 0.69
VPS9D1-203ENST00000563798 TBX3O15119 743 aa19.36■□□□□ 0.69
VPS9D1-203ENST00000563798 SLC37A4O43826 429 aa19.36■□□□□ 0.69
VPS9D1-203ENST00000563798 GPR37L1O60883 481 aa19.36■□□□□ 0.69
VPS9D1-203ENST00000563798 CTDNEP1O95476 244 aa19.36■□□□□ 0.69
VPS9D1-203ENST00000563798 ZSCAN20P17040 1043 aaPredicted RBP19.36■□□□□ 0.69
VPS9D1-203ENST00000563798 IRS1P35568 1242 aa19.36■□□□□ 0.69
VPS9D1-203ENST00000563798 PSMC5P62195 406 aa19.36■□□□□ 0.69
VPS9D1-203ENST00000563798 DLX2Q07687 328 aaPredicted RBP19.36■□□□□ 0.69
VPS9D1-203ENST00000563798 SMAD2Q15796 467 aaKnown RBP19.36■□□□□ 0.69
VPS9D1-203ENST00000563798 NEK8Q86SG6 692 aa19.36■□□□□ 0.69
VPS9D1-203ENST00000563798 EFHBQ8N7U6 833 aa19.36■□□□□ 0.69
VPS9D1-203ENST00000563798 NAP1L4Q99733 375 aaKnown RBP19.36■□□□□ 0.69
VPS9D1-203ENST00000563798 RNF19AQ9NV58 838 aa19.36■□□□□ 0.69
VPS9D1-203ENST00000563798 VAV3Q9UKW4 847 aa19.36■□□□□ 0.69
VPS9D1-203ENST00000563798 A0A0U1RQF3 1178 aa19.35■□□□□ 0.69
VPS9D1-203ENST00000563798 CCDC194A0A1B0GVG4 234 aa19.35■□□□□ 0.69
VPS9D1-203ENST00000563798 TBX10O75333 385 aa19.35■□□□□ 0.69
VPS9D1-203ENST00000563798 MAFO75444 373 aaPredicted RBP19.35■□□□□ 0.69
VPS9D1-203ENST00000563798 FGFR1P11362 822 aa19.35■□□□□ 0.69
VPS9D1-203ENST00000563798 LAG3P18627 525 aa19.35■□□□□ 0.69
VPS9D1-203ENST00000563798 GTF2F1P35269 517 aaKnown RBP eCLIP19.35■□□□□ 0.692e-6■■■□□ 18.3
VPS9D1-203ENST00000563798 ZP2Q05996 745 aa19.35■□□□□ 0.69
VPS9D1-203ENST00000563798 LETM2Q2VYF4 491 aa19.35■□□□□ 0.69
VPS9D1-203ENST00000563798 PDE12Q6L8Q7 609 aaKnown RBP19.35■□□□□ 0.69
VPS9D1-203ENST00000563798 ADGRD2Q7Z7M1 963 aa19.35■□□□□ 0.69
VPS9D1-203ENST00000563798 ECHDC2Q86YB7 292 aa19.35■□□□□ 0.69
VPS9D1-203ENST00000563798 COLGALT1Q8NBJ5 622 aa19.35■□□□□ 0.69
VPS9D1-203ENST00000563798 MSLNLQ96KJ4 702 aa19.35■□□□□ 0.69
VPS9D1-203ENST00000563798 CASD1Q96PB1 797 aa19.35■□□□□ 0.69
VPS9D1-203ENST00000563798 LRFN3Q9BTN0 628 aa19.35■□□□□ 0.69
VPS9D1-203ENST00000563798 TRAIPQ9BWF2 469 aa19.35■□□□□ 0.69
VPS9D1-203ENST00000563798 C11orf16Q9NQ32 467 aa19.35■□□□□ 0.69
VPS9D1-203ENST00000563798 CHST12Q9NRB3 414 aa19.35■□□□□ 0.69
VPS9D1-203ENST00000563798 SEPT9Q9UHD8 586 aaPredicted RBP19.35■□□□□ 0.69
VPS9D1-203ENST00000563798 LZTS1Q9Y250 596 aa19.35■□□□□ 0.69
VPS9D1-203ENST00000563798 EML1O00423 815 aa19.34■□□□□ 0.69
VPS9D1-203ENST00000563798 MBTPS2O43462 519 aa19.34■□□□□ 0.69
VPS9D1-203ENST00000563798 FGF18O76093 207 aa19.34■□□□□ 0.69
VPS9D1-203ENST00000563798 EYA4O95677 639 aa19.34■□□□□ 0.69
VPS9D1-203ENST00000563798 EOMESO95936 686 aa19.34■□□□□ 0.69
VPS9D1-203ENST00000563798 DNM2P50570 870 aa19.34■□□□□ 0.69
VPS9D1-203ENST00000563798 AK2P54819 239 aa19.34■□□□□ 0.69
VPS9D1-203ENST00000563798 PLCB3Q01970 1234 aa19.34■□□□□ 0.69
VPS9D1-203ENST00000563798 DRP2Q13474 957 aa19.34■□□□□ 0.69
VPS9D1-203ENST00000563798 SMAD4Q13485 552 aaKnown RBP19.34■□□□□ 0.69
VPS9D1-203ENST00000563798 MTERF2Q49AM1 385 aa19.34■□□□□ 0.69
VPS9D1-203ENST00000563798 TMEM31Q5JXX7 168 aa19.34■□□□□ 0.69
VPS9D1-203ENST00000563798 EP400NLQ6ZTU2 488 aa19.34■□□□□ 0.69
VPS9D1-203ENST00000563798 ANO5Q75V66 913 aa19.34■□□□□ 0.69
VPS9D1-203ENST00000563798 ZNF598Q86UK7 904 aaKnown RBP19.34■□□□□ 0.69
VPS9D1-203ENST00000563798 ZNF410Q86VK4 478 aa19.34■□□□□ 0.69
VPS9D1-203ENST00000563798 ADHFE1Q8IWW8 467 aa19.34■□□□□ 0.69
VPS9D1-203ENST00000563798 WASF1Q92558 559 aa19.34■□□□□ 0.69
VPS9D1-203ENST00000563798 GCOM2Q9BZD3 368 aaPredicted RBP19.34■□□□□ 0.69
VPS9D1-203ENST00000563798 PPME1Q9Y570 386 aa19.34■□□□□ 0.69
VPS9D1-203ENST00000563798 FSCN2O14926 492 aa19.33■□□□□ 0.68
VPS9D1-203ENST00000563798 LINC01565O15544 149 aa19.33■□□□□ 0.68
VPS9D1-203ENST00000563798 DKC1O60832 514 aaKnown RBP eCLIP19.33■□□□□ 0.68
VPS9D1-203ENST00000563798 EIF5BO60841 1220 aaKnown RBP19.33■□□□□ 0.68
VPS9D1-203ENST00000563798 FDPSP14324 419 aaKnown RBP19.33■□□□□ 0.68
VPS9D1-203ENST00000563798 QARSP47897 775 aaKnown RBP19.33■□□□□ 0.68
VPS9D1-203ENST00000563798 LRRC55Q6ZSA7 311 aa19.33■□□□□ 0.68
VPS9D1-203ENST00000563798 OXER1Q8TDS5 423 aa19.33■□□□□ 0.68
VPS9D1-203ENST00000563798 NLRP7Q8WX94 980 aa19.33■□□□□ 0.68
VPS9D1-203ENST00000563798 RSPH1Q8WYR4 309 aa19.33■□□□□ 0.68
VPS9D1-203ENST00000563798 HAS1Q92839 578 aa19.33■□□□□ 0.68
VPS9D1-203ENST00000563798 JPH2Q9BR39 696 aaPredicted RBP19.33■□□□□ 0.68
VPS9D1-203ENST00000563798 IGFLR1Q9H665 355 aa19.33■□□□□ 0.68
VPS9D1-203ENST00000563798 TLR9Q9NR96 1032 aa19.33■□□□□ 0.68
VPS9D1-203ENST00000563798 GJB4Q9NTQ9 266 aa19.33■□□□□ 0.68
VPS9D1-203ENST00000563798 DACT1Q9NYF0 836 aa19.33■□□□□ 0.68
VPS9D1-203ENST00000563798 CLEC1BQ9P126 229 aa19.33■□□□□ 0.68
VPS9D1-203ENST00000563798 ORC3Q9UBD5 711 aaPredicted RBP19.33■□□□□ 0.68
VPS9D1-203ENST00000563798 HCSTQ9UBK5 93 aa19.33■□□□□ 0.68
VPS9D1-203ENST00000563798 CD207Q9UJ71 328 aa19.33■□□□□ 0.68
VPS9D1-203ENST00000563798 ARIH1Q9Y4X5 557 aaPredicted RBP19.33■□□□□ 0.68
VPS9D1-203ENST00000563798 PLXNA4Q9HCM2 1894 aa19.33■□□□□ 0.68
VPS9D1-203ENST00000563798 FSD2A1L4K1 749 aa19.32■□□□□ 0.68
VPS9D1-203ENST00000563798 TMEM150BA6NC51 233 aa19.32■□□□□ 0.68
VPS9D1-203ENST00000563798 DDX11L8A8MPP1 907 aa19.32■□□□□ 0.68
VPS9D1-203ENST00000563798 P4HBP07237 508 aaKnown RBP19.32■□□□□ 0.68
VPS9D1-203ENST00000563798 ALADP13716 330 aa19.32■□□□□ 0.68
VPS9D1-203ENST00000563798 IBSPP21815 317 aaPredicted RBP19.32■□□□□ 0.68
VPS9D1-203ENST00000563798 SSTR3P32745 418 aaPredicted RBP19.32■□□□□ 0.68
VPS9D1-203ENST00000563798 COASYQ13057 564 aa19.32■□□□□ 0.68
VPS9D1-203ENST00000563798 SPOUT1Q5T280 376 aaKnown RBP19.32■□□□□ 0.68
VPS9D1-203ENST00000563798 PIK3AP1Q6ZUJ8 805 aa19.32■□□□□ 0.68
VPS9D1-203ENST00000563798 EXOC8Q8IYI6 725 aa19.32■□□□□ 0.68
VPS9D1-203ENST00000563798 LRRC43Q8N309 656 aa19.32■□□□□ 0.68
VPS9D1-203ENST00000563798 TNFRSF25Q93038 417 aa19.32■□□□□ 0.68
VPS9D1-203ENST00000563798 ZNF668Q96K58 619 aaPredicted RBP19.32■□□□□ 0.68
VPS9D1-203ENST00000563798 CDCA3Q99618 268 aaPredicted RBP19.32■□□□□ 0.68
VPS9D1-203ENST00000563798 INO80BQ9C086 356 aaPredicted RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms