RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 LSP1P33241 339 aa4.48□□□□□ -1.69
SHCBP1-202ENST00000563219 GLRBP48167 497 aa4.48□□□□□ -1.69
SHCBP1-202ENST00000563219 SESN3P58005 492 aa4.48□□□□□ -1.69
SHCBP1-202ENST00000563219 ALDH6A1Q02252 535 aaKnown RBP4.48□□□□□ -1.69
SHCBP1-202ENST00000563219 FAPQ12884 760 aa4.48□□□□□ -1.69
SHCBP1-202ENST00000563219 DDB1Q16531 1140 aa4.48□□□□□ -1.69
SHCBP1-202ENST00000563219 STPG3Q8N7X2 389 aa4.48□□□□□ -1.69
SHCBP1-202ENST00000563219 ZNF610Q8N9Z0 462 aa4.48□□□□□ -1.69
SHCBP1-202ENST00000563219 SLC16A11Q8NCK7 471 aa4.48□□□□□ -1.69
SHCBP1-202ENST00000563219 HIPK4Q8NE63 616 aa4.48□□□□□ -1.69
SHCBP1-202ENST00000563219 E2F7Q96AV8 911 aa4.48□□□□□ -1.69
SHCBP1-202ENST00000563219 FOXB1Q99853 325 aa4.48□□□□□ -1.69
SHCBP1-202ENST00000563219 KATNBL1Q9H079 304 aa4.48□□□□□ -1.69
SHCBP1-202ENST00000563219 MEGF9Q9H1U4 602 aa4.48□□□□□ -1.69
SHCBP1-202ENST00000563219 SEC61A2Q9H9S3 476 aa4.48□□□□□ -1.69
SHCBP1-202ENST00000563219 INCENPQ9NQS7 918 aa4.48□□□□□ -1.69
SHCBP1-202ENST00000563219 USP36Q9P275 1121 aaKnown RBP4.48□□□□□ -1.69
SHCBP1-202ENST00000563219 KLHL42Q9P2K6 505 aa4.48□□□□□ -1.69
SHCBP1-202ENST00000563219 ALG1L2C9J202 215 aa4.47□□□□□ -1.69
SHCBP1-202ENST00000563219 K7ESF4 209 aa4.47□□□□□ -1.69
SHCBP1-202ENST00000563219 ZNF623O75123 536 aa4.47□□□□□ -1.69
SHCBP1-202ENST00000563219 MAFO75444 373 aaPredicted RBP4.47□□□□□ -1.69
SHCBP1-202ENST00000563219 CNOT4O95628 575 aaKnown RBP4.47□□□□□ -1.69
SHCBP1-202ENST00000563219 IL18BPO95998 194 aa4.47□□□□□ -1.69
SHCBP1-202ENST00000563219 MC4RP32245 332 aa4.47□□□□□ -1.69
SHCBP1-202ENST00000563219 CSF2RBP32927 897 aa4.47□□□□□ -1.69
SHCBP1-202ENST00000563219 STILQ15468 1287 aa4.47□□□□□ -1.69
SHCBP1-202ENST00000563219 BROXQ5VW32 411 aa4.47□□□□□ -1.69
SHCBP1-202ENST00000563219 ZNF585AQ6P3V2 769 aa4.47□□□□□ -1.69
SHCBP1-202ENST00000563219 RALYLQ86SE5 291 aaKnown RBP4.47□□□□□ -1.69
SHCBP1-202ENST00000563219 Q8TCH9 128 aa4.47□□□□□ -1.69
SHCBP1-202ENST00000563219 BTBD2Q9BX70 525 aa4.47□□□□□ -1.69
SHCBP1-202ENST00000563219 AMNQ9BXJ7 453 aa4.47□□□□□ -1.69
SHCBP1-202ENST00000563219 SEMA4AQ9H3S1 761 aa4.47□□□□□ -1.69
SHCBP1-202ENST00000563219 GALNT8Q9NY28 637 aa4.47□□□□□ -1.69
SHCBP1-202ENST00000563219 SLC4A7Q9Y6M7 1214 aa4.47□□□□□ -1.69
SHCBP1-202ENST00000563219 PRAMEF22A3QJZ6 481 aa4.46□□□□□ -1.7
SHCBP1-202ENST00000563219 H0Y858 1186 aa4.46□□□□□ -1.7
SHCBP1-202ENST00000563219 MARCH6O60337 910 aa4.46□□□□□ -1.7
SHCBP1-202ENST00000563219 PRLP01236 227 aa4.46□□□□□ -1.7
SHCBP1-202ENST00000563219 ECE1P42892 770 aa4.46□□□□□ -1.7
SHCBP1-202ENST00000563219 EVA1CP58658 441 aa4.46□□□□□ -1.7
SHCBP1-202ENST00000563219 TMPRSS15P98073 1019 aa4.46□□□□□ -1.7
SHCBP1-202ENST00000563219 R3HDM1Q15032 1099 aaKnown RBP4.46□□□□□ -1.7
SHCBP1-202ENST00000563219 TTC38Q5R3I4 469 aa4.46□□□□□ -1.7
SHCBP1-202ENST00000563219 DPP8Q6V1X1 898 aaPredicted RBP4.46□□□□□ -1.7
SHCBP1-202ENST00000563219 FRMD7Q6ZUT3 714 aa4.46□□□□□ -1.7
SHCBP1-202ENST00000563219 CXXC5Q7LFL8 322 aaKnown RBP4.46□□□□□ -1.7
SHCBP1-202ENST00000563219 RASSF3Q86WH2 238 aa4.46□□□□□ -1.7
SHCBP1-202ENST00000563219 PHYKPLQ8IUZ5 450 aa4.46□□□□□ -1.7
SHCBP1-202ENST00000563219 REXO1L1PQ8IX06 675 aa4.46□□□□□ -1.7
SHCBP1-202ENST00000563219 CLRN3Q8NCR9 226 aa4.46□□□□□ -1.7
SHCBP1-202ENST00000563219 CALML6Q8TD86 181 aa4.46□□□□□ -1.7
SHCBP1-202ENST00000563219 MAML3Q96JK9 1138 aa4.46□□□□□ -1.7
SHCBP1-202ENST00000563219 ZDHHC5Q9C0B5 715 aa4.46□□□□□ -1.7
SHCBP1-202ENST00000563219 PUS7LQ9H0K6 701 aaKnown RBP4.46□□□□□ -1.7
SHCBP1-202ENST00000563219 TYW1Q9NV66 732 aaKnown RBP4.46□□□□□ -1.7
SHCBP1-202ENST00000563219 UCKL1Q9NWZ5 548 aa4.46□□□□□ -1.7
SHCBP1-202ENST00000563219 SLC5A4Q9NY91 659 aa4.46□□□□□ -1.7
SHCBP1-202ENST00000563219 SRRDQ9UH36 339 aa4.46□□□□□ -1.7
SHCBP1-202ENST00000563219 TCAF1Q9Y4C2 921 aa4.46□□□□□ -1.7
SHCBP1-202ENST00000563219 TESMINQ9Y4I5 508 aa4.46□□□□□ -1.7
SHCBP1-202ENST00000563219 UBA6A0AVT1 1052 aaPredicted RBP4.45□□□□□ -1.7
SHCBP1-202ENST00000563219 PRKD3O94806 890 aa4.45□□□□□ -1.7
SHCBP1-202ENST00000563219 C6P13671 934 aa4.45□□□□□ -1.7
SHCBP1-202ENST00000563219 TACR2P21452 398 aa4.45□□□□□ -1.7
SHCBP1-202ENST00000563219 SELENOPP49908 381 aa4.45□□□□□ -1.7
SHCBP1-202ENST00000563219 IL13RA1P78552 427 aa4.45□□□□□ -1.7
SHCBP1-202ENST00000563219 ROM1Q03395 351 aa4.45□□□□□ -1.7
SHCBP1-202ENST00000563219 MOGSQ13724 837 aa4.45□□□□□ -1.7
SHCBP1-202ENST00000563219 KANK2Q63ZY3 851 aa4.45□□□□□ -1.7
SHCBP1-202ENST00000563219 IQSEC1Q6DN90 963 aa4.45□□□□□ -1.7
SHCBP1-202ENST00000563219 CRIP3Q6Q6R5 217 aa4.45□□□□□ -1.7
SHCBP1-202ENST00000563219 KANSL1Q7Z3B3 1105 aa4.45□□□□□ -1.7
SHCBP1-202ENST00000563219 HDGFL2Q7Z4V5 671 aaPredicted RBP4.45□□□□□ -1.7
SHCBP1-202ENST00000563219 Q8N1X5 172 aa4.45□□□□□ -1.7
SHCBP1-202ENST00000563219 C7orf31Q8N865 590 aa4.45□□□□□ -1.7
SHCBP1-202ENST00000563219 RTF1Q92541 710 aaKnown RBP4.45□□□□□ -1.7
SHCBP1-202ENST00000563219 ERCC4Q92889 916 aaPredicted RBP4.45□□□□□ -1.7
SHCBP1-202ENST00000563219 ZNF496Q96IT1 587 aaPredicted RBP4.45□□□□□ -1.7
SHCBP1-202ENST00000563219 GNRHR2Q96P88 292 aa4.45□□□□□ -1.7
SHCBP1-202ENST00000563219 SORCS2Q96PQ0 1159 aa4.45□□□□□ -1.7
SHCBP1-202ENST00000563219 LMF1Q96S06 567 aa4.45□□□□□ -1.7
SHCBP1-202ENST00000563219 TACO1Q9BSH4 297 aaKnown RBP4.45□□□□□ -1.7
SHCBP1-202ENST00000563219 MENTQ9BUN1 341 aa4.45□□□□□ -1.7
SHCBP1-202ENST00000563219 ZNF747Q9BV97 191 aa4.45□□□□□ -1.7
SHCBP1-202ENST00000563219 G3BP2Q9UN86 482 aaKnown RBP4.45□□□□□ -1.7
SHCBP1-202ENST00000563219 MUSKO15146 869 aa4.44□□□□□ -1.7
SHCBP1-202ENST00000563219 CUTAO60888 179 aa4.44□□□□□ -1.7
SHCBP1-202ENST00000563219 AMHP03971 560 aa4.44□□□□□ -1.7
SHCBP1-202ENST00000563219 POLD1P28340 1107 aa4.44□□□□□ -1.7
SHCBP1-202ENST00000563219 ACVRL1P37023 503 aa4.44□□□□□ -1.7
SHCBP1-202ENST00000563219 GDF5P43026 501 aa4.44□□□□□ -1.7
SHCBP1-202ENST00000563219 GUCY2FP51841 1108 aa4.44□□□□□ -1.7
SHCBP1-202ENST00000563219 SLC6A3Q01959 620 aa4.44□□□□□ -1.7
SHCBP1-202ENST00000563219 FAM50AQ14320 339 aaKnown RBP4.44□□□□□ -1.7
SHCBP1-202ENST00000563219 USP10Q14694 798 aaKnown RBP4.44□□□□□ -1.7
SHCBP1-202ENST00000563219 MYBPC3Q14896 1274 aa4.44□□□□□ -1.7
SHCBP1-202ENST00000563219 SLFN12LQ6IEE8 588 aa4.44□□□□□ -1.7
SHCBP1-202ENST00000563219 TCTN3Q6NUS6 607 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms