RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 DHX33Q9H6R0 707 aaKnown RBP10.48□□□□□ -0.73
CDH13-205ENST00000562307 TMEM206Q9H813 350 aa10.48□□□□□ -0.73
CDH13-205ENST00000562307 METTL14Q9HCE5 456 aaKnown RBP10.48□□□□□ -0.73
CDH13-205ENST00000562307 XPNPEP1Q9NQW7 623 aa10.48□□□□□ -0.73
CDH13-205ENST00000562307 CAPN11Q9UMQ6 739 aa10.48□□□□□ -0.73
CDH13-205ENST00000562307 SIK3Q9Y2K2 1263 aa10.48□□□□□ -0.73
CDH13-205ENST00000562307 A0A1W2PQJ5 194 aa10.47□□□□□ -0.73
CDH13-205ENST00000562307 RNF225M0QZC1 329 aaPredicted RBP10.47□□□□□ -0.73
CDH13-205ENST00000562307 ARHGAP6O43182 974 aa10.47□□□□□ -0.73
CDH13-205ENST00000562307 SORBS3O60504 671 aa10.47□□□□□ -0.73
CDH13-205ENST00000562307 SNAI1O95863 264 aaPredicted RBP10.47□□□□□ -0.73
CDH13-205ENST00000562307 TPM1P09493 284 aa10.47□□□□□ -0.73
CDH13-205ENST00000562307 CASP14P31944 242 aa10.47□□□□□ -0.73
CDH13-205ENST00000562307 ABCD1P33897 745 aa10.47□□□□□ -0.73
CDH13-205ENST00000562307 RFC5P40937 340 aa10.47□□□□□ -0.73
CDH13-205ENST00000562307 NPTX2P47972 431 aa10.47□□□□□ -0.73
CDH13-205ENST00000562307 SMTNP53814 917 aa10.47□□□□□ -0.73
CDH13-205ENST00000562307 GOLGA8FQ08AF8 430 aa10.47□□□□□ -0.73
CDH13-205ENST00000562307 GOLGA8DPQ0D2H9 430 aa10.47□□□□□ -0.73
CDH13-205ENST00000562307 LAMC2Q13753 1193 aa10.47□□□□□ -0.73
CDH13-205ENST00000562307 SYCP1Q15431 976 aa10.47□□□□□ -0.73
CDH13-205ENST00000562307 FAM102BQ5T8I3 360 aa10.47□□□□□ -0.73
CDH13-205ENST00000562307 MAEAQ7L5Y9 396 aa10.47□□□□□ -0.73
CDH13-205ENST00000562307 HS2ST1Q7LGA3 356 aa10.47□□□□□ -0.73
CDH13-205ENST00000562307 IFNL1Q8IU54 200 aa10.47□□□□□ -0.73
CDH13-205ENST00000562307 C17orf53Q8N3J3 647 aaPredicted RBP10.47□□□□□ -0.73
CDH13-205ENST00000562307 TMEM161BQ8NDZ6 487 aa10.47□□□□□ -0.73
CDH13-205ENST00000562307 EMID1Q96A84 441 aaPredicted RBP10.47□□□□□ -0.73
CDH13-205ENST00000562307 MAML3Q96JK9 1138 aa10.47□□□□□ -0.73
CDH13-205ENST00000562307 FAM167AQ96KS9 214 aa10.47□□□□□ -0.73
CDH13-205ENST00000562307 BAG1Q99933 345 aaPredicted RBP10.47□□□□□ -0.73
CDH13-205ENST00000562307 EDEM3Q9BZQ6 932 aa10.47□□□□□ -0.73
CDH13-205ENST00000562307 ATP6V0A4Q9HBG4 840 aa10.47□□□□□ -0.73
CDH13-205ENST00000562307 GPRC5CQ9NQ84 441 aa10.47□□□□□ -0.73
CDH13-205ENST00000562307 PDGFCQ9NRA1 345 aa10.47□□□□□ -0.73
CDH13-205ENST00000562307 AGPAT3Q9NRZ7 376 aa10.47□□□□□ -0.73
CDH13-205ENST00000562307 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.47□□□□□ -0.73
CDH13-205ENST00000562307 SEPT9Q9UHD8 586 aaPredicted RBP10.47□□□□□ -0.73
CDH13-205ENST00000562307 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.47□□□□□ -0.73
CDH13-205ENST00000562307 EMSYQ7Z589 1322 aa10.47□□□□□ -0.73
CDH13-205ENST00000562307 ZNFX1Q9P2E3 1918 aaKnown RBP10.46□□□□□ -0.73
CDH13-205ENST00000562307 TTC26A0AVF1 554 aa10.46□□□□□ -0.73
CDH13-205ENST00000562307 H0YCG3 227 aa10.46□□□□□ -0.73
CDH13-205ENST00000562307 K7ENM7 598 aa10.46□□□□□ -0.73
CDH13-205ENST00000562307 KIF3CO14782 793 aa10.46□□□□□ -0.73
CDH13-205ENST00000562307 TLR2O60603 784 aa10.46□□□□□ -0.73
CDH13-205ENST00000562307 MAFO75444 373 aaPredicted RBP10.46□□□□□ -0.73
CDH13-205ENST00000562307 OFD1O75665 1012 aa10.46□□□□□ -0.73
CDH13-205ENST00000562307 AKAP3O75969 853 aa10.46□□□□□ -0.73
CDH13-205ENST00000562307 HOXC6P09630 235 aa10.46□□□□□ -0.73
CDH13-205ENST00000562307 EPB41P11171 864 aaKnown RBP10.46□□□□□ -0.73
CDH13-205ENST00000562307 PSMC2P35998 433 aaKnown RBP10.46□□□□□ -0.73
CDH13-205ENST00000562307 ARL2P36404 184 aa10.46□□□□□ -0.73
CDH13-205ENST00000562307 TM4SF4P48230 202 aa10.46□□□□□ -0.73
CDH13-205ENST00000562307 SLC26A2P50443 739 aa10.46□□□□□ -0.73
CDH13-205ENST00000562307 PEX3P56589 373 aa10.46□□□□□ -0.73
CDH13-205ENST00000562307 ARHGAP1Q07960 439 aa10.46□□□□□ -0.73
CDH13-205ENST00000562307 TAF1CQ15572 869 aaPredicted RBP10.46□□□□□ -0.73
CDH13-205ENST00000562307 HSDL1Q3SXM5 330 aa10.46□□□□□ -0.73
CDH13-205ENST00000562307 MTERF2Q49AM1 385 aa10.46□□□□□ -0.73
CDH13-205ENST00000562307 E4F1Q66K89 784 aaPredicted RBP10.46□□□□□ -0.73
CDH13-205ENST00000562307 DPP9Q86TI2 863 aa10.46□□□□□ -0.73
CDH13-205ENST00000562307 KSR1Q8IVT5 923 aa10.46□□□□□ -0.73
CDH13-205ENST00000562307 EXOC8Q8IYI6 725 aa10.46□□□□□ -0.73
CDH13-205ENST00000562307 CCAR2Q8N163 923 aaKnown RBP10.46□□□□□ -0.73
CDH13-205ENST00000562307 CPLX3Q8WVH0 158 aa10.46□□□□□ -0.73
CDH13-205ENST00000562307 BBXQ8WY36 941 aaPredicted RBP10.46□□□□□ -0.73
CDH13-205ENST00000562307 BSNDQ8WZ55 320 aa10.46□□□□□ -0.73
CDH13-205ENST00000562307 USP6NLQ92738 828 aa10.46□□□□□ -0.73
CDH13-205ENST00000562307 SPATA33Q96N06 139 aa10.46□□□□□ -0.73
CDH13-205ENST00000562307 DNAJC7Q99615 494 aa10.46□□□□□ -0.73
CDH13-205ENST00000562307 TINF2Q9BSI4 451 aa10.46□□□□□ -0.73
CDH13-205ENST00000562307 AZI2Q9H6S1 392 aa10.46□□□□□ -0.73
CDH13-205ENST00000562307 SLC5A4Q9NY91 659 aa10.46□□□□□ -0.73
CDH13-205ENST00000562307 ARMCX3Q9UH62 379 aaPredicted RBP10.46□□□□□ -0.73
CDH13-205ENST00000562307 CPA4Q9UI42 421 aa10.46□□□□□ -0.73
CDH13-205ENST00000562307 LUC7L2Q9Y383 392 aaKnown RBP10.46□□□□□ -0.73
CDH13-205ENST00000562307 ZNF236Q9UL36 1845 aa10.46□□□□□ -0.74
CDH13-205ENST00000562307 IGKV6-21A0A0C4DH24 114 aa10.45□□□□□ -0.74
CDH13-205ENST00000562307 PES1O00541 588 aaKnown RBP10.45□□□□□ -0.74
CDH13-205ENST00000562307 NOP56O00567 594 aaKnown RBP10.45□□□□□ -0.74
CDH13-205ENST00000562307 CLIC2O15247 247 aa10.45□□□□□ -0.74
CDH13-205ENST00000562307 MAPK13O15264 365 aa10.45□□□□□ -0.74
CDH13-205ENST00000562307 SLC16A4O15374 487 aa10.45□□□□□ -0.74
CDH13-205ENST00000562307 GH1P01241 217 aa10.45□□□□□ -0.74
CDH13-205ENST00000562307 IGHA2P01877 340 aa10.45□□□□□ -0.74
CDH13-205ENST00000562307 KRT9P35527 623 aa10.45□□□□□ -0.74
CDH13-205ENST00000562307 CASP4P49662 377 aa10.45□□□□□ -0.74
CDH13-205ENST00000562307 ZBED6P86452 979 aa10.45□□□□□ -0.74
CDH13-205ENST00000562307 SREBF2Q12772 1141 aa10.45□□□□□ -0.74
CDH13-205ENST00000562307 KCNMA1Q12791 1236 aa10.45□□□□□ -0.74
CDH13-205ENST00000562307 MAP2K5Q13163 448 aa10.45□□□□□ -0.74
CDH13-205ENST00000562307 DMP1Q13316 513 aaPredicted RBP10.45□□□□□ -0.74
CDH13-205ENST00000562307 EMC2Q15006 297 aa10.45□□□□□ -0.74
CDH13-205ENST00000562307 TMEM63BQ5T3F8 832 aa10.45□□□□□ -0.74
CDH13-205ENST00000562307 IQSEC1Q6DN90 963 aa10.45□□□□□ -0.74
CDH13-205ENST00000562307 TRMT1LQ7Z2T5 733 aaKnown RBP10.45□□□□□ -0.74
CDH13-205ENST00000562307 TMTC1Q8IUR5 882 aa10.45□□□□□ -0.74
CDH13-205ENST00000562307 MAP4K3Q8IVH8 894 aa10.45□□□□□ -0.74
CDH13-205ENST00000562307 SYCP3Q8IZU3 236 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms