RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 GLT8D2Q9H1C3 349 aa15.14■□□□□ 0.01
VPS9D1-202ENST00000561976 KDM4CQ9H3R0 1056 aa15.14■□□□□ 0.01
VPS9D1-202ENST00000561976 SERPINB13Q9UIV8 391 aa15.14■□□□□ 0.01
VPS9D1-202ENST00000561976 TTC7AQ9ULT0 858 aaPredicted RBP15.14■□□□□ 0.01
VPS9D1-202ENST00000561976 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.14■□□□□ 0.01
VPS9D1-202ENST00000561976 ATP8B3O60423 1300 aa15.14■□□□□ 0.01
VPS9D1-202ENST00000561976 COL16A1Q07092 1604 aaPredicted RBP15.14■□□□□ 0.01
VPS9D1-202ENST00000561976 DDX3YO15523 660 aaKnown RBP15.14■□□□□ 0.01
VPS9D1-202ENST00000561976 TRIM37O94972 964 aa15.14■□□□□ 0.01
VPS9D1-202ENST00000561976 TMEM253P0C7T8 217 aa15.14■□□□□ 0.01
VPS9D1-202ENST00000561976 IL1R1P14778 569 aa15.14■□□□□ 0.01
VPS9D1-202ENST00000561976 RPA1P27694 616 aa15.14■□□□□ 0.01
VPS9D1-202ENST00000561976 ARHGAP4P98171 946 aa15.14■□□□□ 0.01
VPS9D1-202ENST00000561976 DRAP1Q14919 205 aaPredicted RBP15.14■□□□□ 0.01
VPS9D1-202ENST00000561976 E2F5Q15329 346 aa15.14■□□□□ 0.01
VPS9D1-202ENST00000561976 PPP2R5EQ16537 467 aa15.14■□□□□ 0.01
VPS9D1-202ENST00000561976 DUPD1Q68J44 220 aa15.14■□□□□ 0.01
VPS9D1-202ENST00000561976 C15orf52Q6ZUT6 534 aaKnown RBP15.14■□□□□ 0.01
VPS9D1-202ENST00000561976 FAM186BQ8IYM0 893 aa15.14■□□□□ 0.01
VPS9D1-202ENST00000561976 ERVK-5Q9HDB9 667 aa15.14■□□□□ 0.01
VPS9D1-202ENST00000561976 DNAJC12Q9UKB3 198 aa15.14■□□□□ 0.01
VPS9D1-202ENST00000561976 DIS3Q9Y2L1 958 aaKnown RBP15.14■□□□□ 0.01
VPS9D1-202ENST00000561976 GAKO14976 1311 aa15.14■□□□□ 0.01
VPS9D1-202ENST00000561976 IGSF9BQ9UPX0 1349 aa15.14■□□□□ 0.01
VPS9D1-202ENST00000561976 CCDC169A6NNP5 214 aa15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 OPLAHO14841 1288 aa15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 RGS16O15492 202 aaPredicted RBP15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 SPATA31C1P0DKV0 1188 aa15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 EZRP15311 586 aaKnown RBP15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 TNFAIP3P21580 790 aa15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 PLS1Q14651 629 aa15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 CNBD1Q8NA66 436 aa15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 SLC30A5Q8TAD4 765 aa15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 UHMK1Q8TAS1 419 aaKnown RBP15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 CENPTQ96BT3 561 aa15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 TACO1Q9BSH4 297 aaKnown RBP15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 CARD9Q9H257 536 aa15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 PABPC3Q9H361 631 aaKnown RBP15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 AZI2Q9H6S1 392 aa15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 MCM8Q9UJA3 840 aa15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 RASAL2Q9UJF2 1139 aa15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 NHSQ6T4R5 1651 aa15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 GTPBP10A4D1E9 387 aaKnown RBP15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 CCT8L1PA6NM43 557 aa15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 ATP2B4P23634 1241 aa15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 XRCC4Q13426 336 aa15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 PPP1R7Q15435 360 aa15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 KIAA1755Q5JYT7 1200 aa15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 PTF1AQ7RTS3 328 aa15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 TBC1D22AQ8WUA7 517 aa15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 RUSC1Q9BVN2 902 aa15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 TXLNGYQ9BZA5 131 aa15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 IKZF4Q9H2S9 585 aa15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 TMOD4Q9NZQ9 345 aa15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 CYP3A7-CYP3A51PA0A087WV96 503 aa15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 FAM187AA6NFU0 413 aa15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 GHRP10912 638 aa15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 CYP3A7P24462 503 aa15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 PSMC2P35998 433 aaKnown RBP15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 PPATQ06203 517 aa15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 SPIRE1Q08AE8 756 aa15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 SPDYCQ5MJ68 293 aa15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 RC3H1Q5TC82 1133 aaKnown RBP15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 CHADLQ6NUI6 762 aa15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 FAM228AQ86W67 206 aa15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 JAMLQ86YT9 394 aa15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 FBXO25Q8TCJ0 367 aa15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 N4BP2L2Q92802 583 aaPredicted RBP15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 ARHGEF26Q96DR7 871 aa15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 STK33Q9BYT3 514 aa15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 CCDC113Q9H0I3 377 aa15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 DDX4Q9NQI0 724 aaKnown RBP15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 ZDHHC18Q9NUE0 388 aa15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 NCANO14594 1321 aa15.13■□□□□ 0.01
VPS9D1-202ENST00000561976 ELF1P32519 619 aa15.12■□□□□ 0.01
VPS9D1-202ENST00000561976 GTF2IP78347 998 aa15.12■□□□□ 0.01
VPS9D1-202ENST00000561976 SLC29A2Q14542 456 aa15.12■□□□□ 0.01
VPS9D1-202ENST00000561976 ARHGAP44Q17R89 818 aa15.12■□□□□ 0.01
VPS9D1-202ENST00000561976 WLSQ5T9L3 541 aa15.12■□□□□ 0.01
VPS9D1-202ENST00000561976 HIBCHQ6NVY1 386 aaPredicted RBP15.12■□□□□ 0.01
VPS9D1-202ENST00000561976 AMIGO3Q86WK7 504 aa15.12■□□□□ 0.01
VPS9D1-202ENST00000561976 ETNPPLQ8TBG4 499 aa15.12■□□□□ 0.01
VPS9D1-202ENST00000561976 THAP2Q9H0W7 228 aa15.12■□□□□ 0.01
VPS9D1-202ENST00000561976 INTS9Q9NV88 658 aaKnown RBP15.12■□□□□ 0.01
VPS9D1-202ENST00000561976 SAMD15Q9P1V8 674 aa15.12■□□□□ 0.01
VPS9D1-202ENST00000561976 SPATA31A5Q5VU36 1347 aa15.12■□□□□ 0.01
VPS9D1-202ENST00000561976 SPATA31A7Q8IWB4 1347 aa15.12■□□□□ 0.01
VPS9D1-202ENST00000561976 C6orf229H3BNL8 230 aa15.12■□□□□ 0.01
VPS9D1-202ENST00000561976 DNAJC8O75937 253 aaPredicted RBP15.12■□□□□ 0.01
VPS9D1-202ENST00000561976 FAM13AO94988 1023 aa15.12■□□□□ 0.01
VPS9D1-202ENST00000561976 VIMP08670 466 aaKnown RBP15.12■□□□□ 0.01
VPS9D1-202ENST00000561976 NUDT17P0C025 328 aa15.12■□□□□ 0.01
VPS9D1-202ENST00000561976 DHX34Q14147 1143 aaKnown RBP15.12■□□□□ 0.01
VPS9D1-202ENST00000561976 BMT2Q1RMZ1 405 aa15.12■□□□□ 0.01
VPS9D1-202ENST00000561976 RNF25Q96BH1 459 aaPredicted RBP15.12■□□□□ 0.01
VPS9D1-202ENST00000561976 RABGAP1Q9Y3P9 1069 aa15.12■□□□□ 0.01
VPS9D1-202ENST00000561976 ARFGEF1Q9Y6D6 1849 aa15.12■□□□□ 0.01
VPS9D1-202ENST00000561976 KIF13BQ9NQT8 1826 aa15.11■□□□□ 0.01
VPS9D1-202ENST00000561976 MYO3BQ8WXR4 1341 aa15.11■□□□□ 0.01
VPS9D1-202ENST00000561976 TMEM110-MUSTN1A8MSY1 372 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms