RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 STAMQ92783 540 aa11.42□□□□□ -0.58
LRRC28-221ENST00000561276 DCBLD2Q96PD2 775 aa11.42□□□□□ -0.58
LRRC28-221ENST00000561276 PYM1Q9BRP8 204 aaKnown RBP11.42□□□□□ -0.58
LRRC28-221ENST00000561276 PPP1R12CQ9BZL4 782 aa11.42□□□□□ -0.58
LRRC28-221ENST00000561276 HIPK3Q9H422 1215 aa11.42□□□□□ -0.58
LRRC28-221ENST00000561276 CUEDC2Q9H467 287 aa11.42□□□□□ -0.58
LRRC28-221ENST00000561276 ATP6V0A4Q9HBG4 840 aa11.42□□□□□ -0.58
LRRC28-221ENST00000561276 PRDM5Q9NQX1 630 aaPredicted RBP11.42□□□□□ -0.58
LRRC28-221ENST00000561276 SUCLA2Q9P2R7 463 aaPredicted RBP11.42□□□□□ -0.58
LRRC28-221ENST00000561276 PRKAG2Q9UGJ0 569 aa11.42□□□□□ -0.58
LRRC28-221ENST00000561276 SERTAD1Q9UHV2 236 aa11.42□□□□□ -0.58
LRRC28-221ENST00000561276 TBX21Q9UL17 535 aa11.42□□□□□ -0.58
LRRC28-221ENST00000561276 AKT3Q9Y243 479 aa11.42□□□□□ -0.58
LRRC28-221ENST00000561276 SCN5AQ14524 2016 aa11.42□□□□□ -0.58
LRRC28-221ENST00000561276 UMODL1Q5DID0 1318 aa11.41□□□□□ -0.58
LRRC28-221ENST00000561276 NPHP3-ACAD11A0A0J9YXS1 232 aa11.41□□□□□ -0.58
LRRC28-221ENST00000561276 KIAA0355O15063 1070 aa11.41□□□□□ -0.58
LRRC28-221ENST00000561276 GAS2O43903 313 aaKnown RBP11.41□□□□□ -0.58
LRRC28-221ENST00000561276 TIMP1P01033 207 aa11.41□□□□□ -0.58
LRRC28-221ENST00000561276 VTNP04004 478 aa11.41□□□□□ -0.58
LRRC28-221ENST00000561276 RPLP2P05387 115 aaKnown RBP11.41□□□□□ -0.58
LRRC28-221ENST00000561276 SLFN14P0C7P3 912 aa11.41□□□□□ -0.58
LRRC28-221ENST00000561276 RAG1P15918 1043 aa11.41□□□□□ -0.58
LRRC28-221ENST00000561276 SYN1P17600 705 aa11.41□□□□□ -0.58
LRRC28-221ENST00000561276 ITGB8P26012 769 aa11.41□□□□□ -0.58
LRRC28-221ENST00000561276 CYP2C18P33260 490 aa11.41□□□□□ -0.58
LRRC28-221ENST00000561276 ARL2P36404 184 aa11.41□□□□□ -0.58
LRRC28-221ENST00000561276 NLRP11P59045 1033 aaKnown RBP11.41□□□□□ -0.58
LRRC28-221ENST00000561276 UBE2HP62256 183 aa11.41□□□□□ -0.58
LRRC28-221ENST00000561276 SNW1Q13573 536 aaKnown RBP11.41□□□□□ -0.58
LRRC28-221ENST00000561276 FAM102BQ5T8I3 360 aa11.41□□□□□ -0.58
LRRC28-221ENST00000561276 GPBP1Q86WP2 473 aa11.41□□□□□ -0.58
LRRC28-221ENST00000561276 RHPN2Q8IUC4 686 aa11.41□□□□□ -0.58
LRRC28-221ENST00000561276 KSR1Q8IVT5 923 aa11.41□□□□□ -0.58
LRRC28-221ENST00000561276 CEP57L1Q8IYX8 460 aa11.41□□□□□ -0.58
LRRC28-221ENST00000561276 FMR1NBQ8N0W7 255 aaPredicted RBP11.41□□□□□ -0.58
LRRC28-221ENST00000561276 PLCD3Q8N3E9 789 aa11.41□□□□□ -0.58
LRRC28-221ENST00000561276 ENGASEQ8NFI3 743 aa11.41□□□□□ -0.58
LRRC28-221ENST00000561276 MAP7D2Q96T17 732 aa11.41□□□□□ -0.58
LRRC28-221ENST00000561276 NOC4LQ9BVI4 516 aaKnown RBP11.41□□□□□ -0.58
LRRC28-221ENST00000561276 RUSC1Q9BVN2 902 aa11.41□□□□□ -0.58
LRRC28-221ENST00000561276 CDHR5Q9HBB8 845 aa11.41□□□□□ -0.58
LRRC28-221ENST00000561276 LMBRD1Q9NUN5 540 aa11.41□□□□□ -0.58
LRRC28-221ENST00000561276 KBTBD4Q9NVX7 518 aa11.41□□□□□ -0.58
LRRC28-221ENST00000561276 KCND2Q9NZV8 630 aa11.41□□□□□ -0.58
LRRC28-221ENST00000561276 NR2E3Q9Y5X4 410 aa11.41□□□□□ -0.58
LRRC28-221ENST00000561276 MKI67P46013 3256 aaKnown RBP11.41□□□□□ -0.58
LRRC28-221ENST00000561276 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.4□□□□□ -0.58
LRRC28-221ENST00000561276 MYMKA6NI61 221 aa11.4□□□□□ -0.58
LRRC28-221ENST00000561276 SFI1A8K8P3 1242 aa11.4□□□□□ -0.58
LRRC28-221ENST00000561276 RSPH10B2B2RC85 870 aa11.4□□□□□ -0.58
LRRC28-221ENST00000561276 GOLGA6L22H0YM25 854 aa11.4□□□□□ -0.58
LRRC28-221ENST00000561276 M0QZ92 97 aa11.4□□□□□ -0.58
LRRC28-221ENST00000561276 ASAP2O43150 1006 aa11.4□□□□□ -0.58
LRRC28-221ENST00000561276 ACTN4O43707 911 aaKnown RBP11.4□□□□□ -0.58
LRRC28-221ENST00000561276 HIP1RO75146 1068 aa11.4□□□□□ -0.58
LRRC28-221ENST00000561276 CAND2O75155 1236 aa11.4□□□□□ -0.58
LRRC28-221ENST00000561276 GPR32O75388 356 aa11.4□□□□□ -0.58
LRRC28-221ENST00000561276 CHRNA1P02708 482 aa11.4□□□□□ -0.58
LRRC28-221ENST00000561276 KRT18P05783 430 aaKnown RBP11.4□□□□□ -0.58
LRRC28-221ENST00000561276 IQCF3P0C7M6 154 aa11.4□□□□□ -0.58
LRRC28-221ENST00000561276 RSPH10BP0C881 870 aa11.4□□□□□ -0.58
LRRC28-221ENST00000561276 SRGAP2CP0DJJ0 459 aa11.4□□□□□ -0.58
LRRC28-221ENST00000561276 LIG1P18858 919 aa11.4□□□□□ -0.58
LRRC28-221ENST00000561276 GUCY2CP25092 1073 aa11.4□□□□□ -0.58
LRRC28-221ENST00000561276 AFMP43652 599 aa11.4□□□□□ -0.58
LRRC28-221ENST00000561276 CCL23P55773 120 aa11.4□□□□□ -0.58
LRRC28-221ENST00000561276 MRPS6P82932 125 aaKnown RBP11.4□□□□□ -0.58
LRRC28-221ENST00000561276 CDC42EP1Q00587 391 aa11.4□□□□□ -0.58
LRRC28-221ENST00000561276 AMPD3Q01432 767 aa11.4□□□□□ -0.58
LRRC28-221ENST00000561276 FAM160A1Q05DH4 1040 aa11.4□□□□□ -0.58
LRRC28-221ENST00000561276 RBL2Q08999 1139 aa11.4□□□□□ -0.58
LRRC28-221ENST00000561276 GIT2Q14161 759 aa11.4□□□□□ -0.58
LRRC28-221ENST00000561276 MXD4Q14582 209 aaPredicted RBP11.4□□□□□ -0.58
LRRC28-221ENST00000561276 FAM26DQ5JW98 314 aa11.4□□□□□ -0.58
LRRC28-221ENST00000561276 DYMQ7RTS9 669 aa11.4□□□□□ -0.58
LRRC28-221ENST00000561276 PSPC1Q8WXF1 523 aaKnown RBP11.4□□□□□ -0.58
LRRC28-221ENST00000561276 DDX12PQ92771 950 aa11.4□□□□□ -0.58
LRRC28-221ENST00000561276 ZNF668Q96K58 619 aaPredicted RBP11.4□□□□□ -0.58
LRRC28-221ENST00000561276 PPP1R16BQ96T49 567 aa11.4□□□□□ -0.58
LRRC28-221ENST00000561276 TIPINQ9BVW5 301 aa11.4□□□□□ -0.58
LRRC28-221ENST00000561276 CELF4Q9BZC1 486 aaKnown RBP11.4□□□□□ -0.58
LRRC28-221ENST00000561276 LRRC27Q9C0I9 530 aa11.4□□□□□ -0.58
LRRC28-221ENST00000561276 GPRC5CQ9NQ84 441 aa11.4□□□□□ -0.58
LRRC28-221ENST00000561276 USP25Q9UHP3 1055 aa11.4□□□□□ -0.58
LRRC28-221ENST00000561276 GINS2Q9Y248 185 aa11.4□□□□□ -0.58
LRRC28-221ENST00000561276 COL4A3BPQ9Y5P4 624 aa11.4□□□□□ -0.58
LRRC28-221ENST00000561276 TANC1Q9C0D5 1861 aa11.4□□□□□ -0.59
LRRC28-221ENST00000561276 LTBP2Q14767 1821 aa11.39□□□□□ -0.59
LRRC28-221ENST00000561276 TNRC18O15417 2968 aaPredicted RBP11.39□□□□□ -0.59
LRRC28-221ENST00000561276 NR1I2O75469 434 aa11.39□□□□□ -0.59
LRRC28-221ENST00000561276 CTSHP09668 335 aa11.39□□□□□ -0.59
LRRC28-221ENST00000561276 SELPP16109 830 aa11.39□□□□□ -0.59
LRRC28-221ENST00000561276 GLRA2P23416 452 aa11.39□□□□□ -0.59
LRRC28-221ENST00000561276 GPC3P51654 580 aa11.39□□□□□ -0.59
LRRC28-221ENST00000561276 MLLT1Q03111 559 aaPredicted RBP11.39□□□□□ -0.59
LRRC28-221ENST00000561276 LAMTOR4Q0VGL1 99 aa11.39□□□□□ -0.59
LRRC28-221ENST00000561276 KIZQ2M2Z5 673 aa11.39□□□□□ -0.59
LRRC28-221ENST00000561276 MFSD5Q6N075 450 aa11.39□□□□□ -0.59
LRRC28-221ENST00000561276 TRAF7Q6Q0C0 670 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms