RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 COL19A1Q14993 1142 aa17.94■□□□□ 0.46
LMX1B-204ENST00000561065 FAM102BQ5T8I3 360 aa17.94■□□□□ 0.46
LMX1B-204ENST00000561065 NSUN3Q9H649 340 aaKnown RBP17.94■□□□□ 0.46
LMX1B-204ENST00000561065 ALG13Q9NP73 1137 aaKnown RBP17.94■□□□□ 0.46
LMX1B-204ENST00000561065 C1orf112Q9NSG2 853 aa17.94■□□□□ 0.46
LMX1B-204ENST00000561065 RNF19AQ9NV58 838 aa17.94■□□□□ 0.46
LMX1B-204ENST00000561065 ST18O60284 1047 aa17.93■□□□□ 0.46
LMX1B-204ENST00000561065 ITGB1P05556 798 aa17.93■□□□□ 0.46
LMX1B-204ENST00000561065 FGFR1P11362 822 aa17.93■□□□□ 0.46
LMX1B-204ENST00000561065 DARSP14868 501 aaKnown RBP17.93■□□□□ 0.46
LMX1B-204ENST00000561065 KCNA5P22460 613 aa17.93■□□□□ 0.46
LMX1B-204ENST00000561065 TMOD1P28289 359 aa17.93■□□□□ 0.46
LMX1B-204ENST00000561065 SLC24A5Q71RS6 500 aa17.93■□□□□ 0.46
LMX1B-204ENST00000561065 FAM20AQ96MK3 541 aa17.93■□□□□ 0.46
LMX1B-204ENST00000561065 KIF2CQ99661 725 aa17.93■□□□□ 0.46
LMX1B-204ENST00000561065 PLVAPQ9BX97 442 aa17.93■□□□□ 0.46
LMX1B-204ENST00000561065 SH2B1Q9NRF2 756 aaPredicted RBP17.93■□□□□ 0.46
LMX1B-204ENST00000561065 LRFN2Q9ULH4 789 aa17.93■□□□□ 0.46
LMX1B-204ENST00000561065 CSDE1O75534 798 aaKnown RBP17.92■□□□□ 0.46
LMX1B-204ENST00000561065 EIF4BP23588 611 aaKnown RBP17.92■□□□□ 0.46
LMX1B-204ENST00000561065 RBM25P49756 843 aaKnown RBP17.92■□□□□ 0.46
LMX1B-204ENST00000561065 PSMC5P62195 406 aa17.92■□□□□ 0.46
LMX1B-204ENST00000561065 RABEP1Q15276 862 aa17.92■□□□□ 0.46
LMX1B-204ENST00000561065 ZNF579Q8NAF0 562 aaKnown RBP17.92■□□□□ 0.46
LMX1B-204ENST00000561065 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.92■□□□□ 0.46
LMX1B-204ENST00000561065 P2RX5Q93086 422 aa17.92■□□□□ 0.46
LMX1B-204ENST00000561065 LMAN2LQ9H0V9 348 aa17.92■□□□□ 0.46
LMX1B-204ENST00000561065 PLAGL2Q9UPG8 496 aa17.92■□□□□ 0.46
LMX1B-204ENST00000561065 PCDHB7Q9Y5E2 793 aa17.92■□□□□ 0.46
LMX1B-204ENST00000561065 TBKBP1A7MCY6 615 aa17.91■□□□□ 0.46
LMX1B-204ENST00000561065 DDX11L8A8MPP1 907 aa17.91■□□□□ 0.46
LMX1B-204ENST00000561065 BTBD18B2RXH4 712 aa17.91■□□□□ 0.46
LMX1B-204ENST00000561065 TBX3O15119 743 aa17.91■□□□□ 0.46
LMX1B-204ENST00000561065 IRS1P35568 1242 aa17.91■□□□□ 0.46
LMX1B-204ENST00000561065 NPEPPSP55786 919 aa17.91■□□□□ 0.46
LMX1B-204ENST00000561065 FAM189BP81408 668 aa17.91■□□□□ 0.46
LMX1B-204ENST00000561065 HYAL1Q12794 435 aa17.91■□□□□ 0.46
LMX1B-204ENST00000561065 SAFBQ15424 915 aaKnown RBP eCLIP17.91■□□□□ 0.46
LMX1B-204ENST00000561065 LEXMQ3ZCV2 418 aa17.91■□□□□ 0.46
LMX1B-204ENST00000561065 ODR4Q5SWX8 454 aa17.91■□□□□ 0.46
LMX1B-204ENST00000561065 DIS3L2Q8IYB7 885 aaKnown RBP17.91■□□□□ 0.46
LMX1B-204ENST00000561065 KLHL23Q8NBE8 558 aa17.91■□□□□ 0.46
LMX1B-204ENST00000561065 SPPL3Q8TCT6 385 aa17.91■□□□□ 0.46
LMX1B-204ENST00000561065 NEK9Q8TD19 979 aa17.91■□□□□ 0.46
LMX1B-204ENST00000561065 LLPHQ9BRT6 129 aaKnown RBP17.91■□□□□ 0.46
LMX1B-204ENST00000561065 LXNQ9BS40 222 aa17.91■□□□□ 0.46
LMX1B-204ENST00000561065 TMEM161AQ9NX61 479 aa17.91■□□□□ 0.46
LMX1B-204ENST00000561065 RGL1Q9NZL6 768 aa17.91■□□□□ 0.46
LMX1B-204ENST00000561065 KIF3AQ9Y496 699 aa17.91■□□□□ 0.46
LMX1B-204ENST00000561065 H3BQ06 376 aaPredicted RBP17.9■□□□□ 0.46
LMX1B-204ENST00000561065 MAFO75444 373 aaPredicted RBP17.9■□□□□ 0.46
LMX1B-204ENST00000561065 IL9P15248 144 aa17.9■□□□□ 0.46
LMX1B-204ENST00000561065 ATF7P17544 494 aaPredicted RBP17.9■□□□□ 0.46
LMX1B-204ENST00000561065 GTF2F1P35269 517 aaKnown RBP eCLIP17.9■□□□□ 0.46
LMX1B-204ENST00000561065 QARSP47897 775 aaKnown RBP17.9■□□□□ 0.46
LMX1B-204ENST00000561065 NCAPH2Q6IBW4 605 aa17.9■□□□□ 0.46
LMX1B-204ENST00000561065 FAM43BQ6ZT52 329 aaPredicted RBP17.9■□□□□ 0.46
LMX1B-204ENST00000561065 KSR1Q8IVT5 923 aa17.9■□□□□ 0.46
LMX1B-204ENST00000561065 NLRP7Q8WX94 980 aa17.9■□□□□ 0.46
LMX1B-204ENST00000561065 PABPC5Q96DU9 382 aaKnown RBP17.9■□□□□ 0.46
LMX1B-204ENST00000561065 SCLT1Q96NL6 688 aa17.9■□□□□ 0.46
LMX1B-204ENST00000561065 ELAC1Q9H777 363 aaKnown RBP17.9■□□□□ 0.46
LMX1B-204ENST00000561065 CYP26B1Q9NR63 512 aa17.9■□□□□ 0.46
LMX1B-204ENST00000561065 PCDHGC5Q9Y5F6 944 aa17.9■□□□□ 0.46
LMX1B-204ENST00000561065 A0A087WZ62 844 aa17.89■□□□□ 0.45
LMX1B-204ENST00000561065 MARCH6O60337 910 aa17.89■□□□□ 0.45
LMX1B-204ENST00000561065 LTBRP36941 435 aa17.89■□□□□ 0.45
LMX1B-204ENST00000561065 MCM2P49736 904 aa17.89■□□□□ 0.45
LMX1B-204ENST00000561065 HMGN5P82970 282 aaKnown RBP17.89■□□□□ 0.45
LMX1B-204ENST00000561065 ADGRD2Q7Z7M1 963 aa17.89■□□□□ 0.45
LMX1B-204ENST00000561065 ECHDC2Q86YB7 292 aa17.89■□□□□ 0.45
LMX1B-204ENST00000561065 CCDC83Q8IWF9 413 aa17.89■□□□□ 0.45
LMX1B-204ENST00000561065 DYDC2Q96IM9 177 aa17.89■□□□□ 0.45
LMX1B-204ENST00000561065 FDXACB1Q9BRP7 624 aaPredicted RBP17.89■□□□□ 0.45
LMX1B-204ENST00000561065 CWH43Q9H720 699 aa17.89■□□□□ 0.45
LMX1B-204ENST00000561065 CD320Q9NPF0 282 aa17.89■□□□□ 0.45
LMX1B-204ENST00000561065 BMP2KQ9NSY1 1161 aaPredicted RBP17.89■□□□□ 0.45
LMX1B-204ENST00000561065 ZBTB39O15060 712 aa17.88■□□□□ 0.45
LMX1B-204ENST00000561065 TBX10O75333 385 aa17.88■□□□□ 0.45
LMX1B-204ENST00000561065 P4HBP07237 508 aaKnown RBP17.88■□□□□ 0.45
LMX1B-204ENST00000561065 GUCY1B3Q02153 619 aa17.88■□□□□ 0.45
LMX1B-204ENST00000561065 CYP4A11Q02928 519 aa17.88■□□□□ 0.45
LMX1B-204ENST00000561065 DLX2Q07687 328 aaPredicted RBP17.88■□□□□ 0.45
LMX1B-204ENST00000561065 EPHA7Q15375 998 aa17.88■□□□□ 0.45
LMX1B-204ENST00000561065 CTC1Q2NKJ3 1217 aa17.88■□□□□ 0.45
LMX1B-204ENST00000561065 CLLU1OSQ5K130 101 aa17.88■□□□□ 0.45
LMX1B-204ENST00000561065 LRRC55Q6ZSA7 311 aa17.88■□□□□ 0.45
LMX1B-204ENST00000561065 ZNF598Q86UK7 904 aaKnown RBP17.88■□□□□ 0.45
LMX1B-204ENST00000561065 ZNF710Q8N1W2 664 aa17.88■□□□□ 0.45
LMX1B-204ENST00000561065 POF1BQ8WVV4 589 aa17.88■□□□□ 0.45
LMX1B-204ENST00000561065 KHSRPQ92945 711 aaKnown RBP eCLIP17.88■□□□□ 0.45
LMX1B-204ENST00000561065 CASD1Q96PB1 797 aa17.88■□□□□ 0.45
LMX1B-204ENST00000561065 DHX33Q9H6R0 707 aaKnown RBP17.88■□□□□ 0.45
LMX1B-204ENST00000561065 ATP6V0A4Q9HBG4 840 aa17.88■□□□□ 0.45
LMX1B-204ENST00000561065 TYW1Q9NV66 732 aaKnown RBP17.88■□□□□ 0.45
LMX1B-204ENST00000561065 CLDND1Q9NY35 253 aa17.88■□□□□ 0.45
LMX1B-204ENST00000561065 SUCLA2Q9P2R7 463 aaPredicted RBP17.88■□□□□ 0.45
LMX1B-204ENST00000561065 LINC01565O15544 149 aa17.87■□□□□ 0.45
LMX1B-204ENST00000561065 BAG4O95429 457 aaKnown RBP17.87■□□□□ 0.45
LMX1B-204ENST00000561065 CTTNQ14247 550 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms