RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 GALNTL6Q49A17 601 aa17.84■□□□□ 0.45
TPM1-228ENST00000560975 SPTY2D1Q68D10 685 aaPredicted RBP17.84■□□□□ 0.45
TPM1-228ENST00000560975 FITM2Q8N6M3 262 aa17.84■□□□□ 0.45
TPM1-228ENST00000560975 OSBPL1AQ9BXW6 950 aa17.84■□□□□ 0.45
TPM1-228ENST00000560975 KCNK9Q9NPC2 374 aa17.84■□□□□ 0.45
TPM1-228ENST00000560975 SEPT11Q9NVA2 429 aaKnown RBP17.84■□□□□ 0.45
TPM1-228ENST00000560975 TOGARAM1Q9Y4F4 1720 aa17.84■□□□□ 0.45
TPM1-228ENST00000560975 CASP5P51878 434 aa17.84■□□□□ 0.45
TPM1-228ENST00000560975 MARSP56192 900 aaKnown RBP17.84■□□□□ 0.45
TPM1-228ENST00000560975 LONRF1Q17RB8 773 aa17.84■□□□□ 0.45
TPM1-228ENST00000560975 EXOC3L1Q86VI1 746 aa17.84■□□□□ 0.45
TPM1-228ENST00000560975 BRD2P25440 801 aaKnown RBP17.83■□□□□ 0.45
TPM1-228ENST00000560975 ZNF131P52739 623 aa17.83■□□□□ 0.45
TPM1-228ENST00000560975 SPDYCQ5MJ68 293 aa17.83■□□□□ 0.45
TPM1-228ENST00000560975 LNX1Q8TBB1 728 aaPredicted RBP17.83■□□□□ 0.45
TPM1-228ENST00000560975 CCDC134Q9H6E4 229 aa17.83■□□□□ 0.45
TPM1-228ENST00000560975 OAS1P00973 400 aaKnown RBP17.83■□□□□ 0.44
TPM1-228ENST00000560975 ADCY1Q08828 1119 aa17.83■□□□□ 0.44
TPM1-228ENST00000560975 MAPK7Q13164 816 aa17.83■□□□□ 0.44
TPM1-228ENST00000560975 DZIP1Q86YF9 867 aaKnown RBP17.83■□□□□ 0.44
TPM1-228ENST00000560975 IFT74Q96LB3 600 aa17.83■□□□□ 0.44
TPM1-228ENST00000560975 RMDN2Q96LZ7 410 aa17.83■□□□□ 0.44
TPM1-228ENST00000560975 SPZ1Q9BXG8 430 aa17.83■□□□□ 0.44
TPM1-228ENST00000560975 GRHL1Q9NZI5 618 aa17.83■□□□□ 0.44
TPM1-228ENST00000560975 PCDHA2Q9Y5H9 948 aa17.83■□□□□ 0.44
TPM1-228ENST00000560975 FRMPD2Q68DX3 1309 aaPredicted RBP17.83■□□□□ 0.44
TPM1-228ENST00000560975 MPHOSPH10O00566 681 aaKnown RBP17.82■□□□□ 0.44
TPM1-228ENST00000560975 PDIA5Q14554 519 aa17.82■□□□□ 0.44
TPM1-228ENST00000560975 UBE2SQ16763 222 aa17.82■□□□□ 0.44
TPM1-228ENST00000560975 TAOK1Q7L7X3 1001 aa17.82■□□□□ 0.44
TPM1-228ENST00000560975 SH3RF3Q8TEJ3 882 aaPredicted RBP17.82■□□□□ 0.44
TPM1-228ENST00000560975 ALG3Q92685 438 aa17.82■□□□□ 0.44
TPM1-228ENST00000560975 ARHGEF3Q9NR81 526 aa17.82■□□□□ 0.44
TPM1-228ENST00000560975 MINPP1Q9UNW1 487 aa17.82■□□□□ 0.44
TPM1-228ENST00000560975 PTPN22Q9Y2R2 807 aa17.82■□□□□ 0.44
TPM1-228ENST00000560975 POTEB3A0JP26 581 aa17.82■□□□□ 0.44
TPM1-228ENST00000560975 TMEM120BA0PK00 339 aa17.82■□□□□ 0.44
TPM1-228ENST00000560975 TMEM110-MUSTN1A8MSY1 372 aa17.82■□□□□ 0.44
TPM1-228ENST00000560975 POTECB2RU33 542 aa17.82■□□□□ 0.44
TPM1-228ENST00000560975 PLA2G4BP0C869 781 aa17.82■□□□□ 0.44
TPM1-228ENST00000560975 XRCC5P13010 732 aaKnown RBP17.82■□□□□ 0.44
TPM1-228ENST00000560975 ICA1Q05084 483 aa17.82■□□□□ 0.44
TPM1-228ENST00000560975 POTEBQ6S5H4 581 aa17.82■□□□□ 0.44
TPM1-228ENST00000560975 ARHGEF26Q96DR7 871 aa17.82■□□□□ 0.44
TPM1-228ENST00000560975 LZTS2Q9BRK4 669 aa17.82■□□□□ 0.44
TPM1-228ENST00000560975 GCNT4Q9P109 453 aa17.82■□□□□ 0.44
TPM1-228ENST00000560975 NKX1-2Q9UD57 310 aaPredicted RBP17.82■□□□□ 0.44
TPM1-228ENST00000560975 RASAL2Q9UJF2 1139 aa17.82■□□□□ 0.44
TPM1-228ENST00000560975 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.82■□□□□ 0.44
TPM1-228ENST00000560975 NHSL1Q5SYE7 1610 aa17.82■□□□□ 0.44
TPM1-228ENST00000560975 RIPK2O43353 540 aa17.81■□□□□ 0.44
TPM1-228ENST00000560975 NTSR2O95665 410 aa17.81■□□□□ 0.44
TPM1-228ENST00000560975 PRKCIP41743 596 aa17.81■□□□□ 0.44
TPM1-228ENST00000560975 SPATA21Q7Z572 469 aa17.81■□□□□ 0.44
TPM1-228ENST00000560975 NAF1Q96HR8 494 aaKnown RBP17.81■□□□□ 0.44
TPM1-228ENST00000560975 HOMER3Q9NSC5 361 aa17.81■□□□□ 0.44
TPM1-228ENST00000560975 ZFATQ9P243 1243 aa17.81■□□□□ 0.44
TPM1-228ENST00000560975 MTRF1LQ9UGC7 380 aaKnown RBP17.81■□□□□ 0.44
TPM1-228ENST00000560975 A0A0A6YYK5 440 aaPredicted RBP17.81■□□□□ 0.44
TPM1-228ENST00000560975 FAM187AA6NFU0 413 aa17.81■□□□□ 0.44
TPM1-228ENST00000560975 RNASELQ05823 741 aaKnown RBP17.81■□□□□ 0.44
TPM1-228ENST00000560975 SNX1Q13596 522 aa17.81■□□□□ 0.44
TPM1-228ENST00000560975 PLS1Q14651 629 aa17.81■□□□□ 0.44
TPM1-228ENST00000560975 GNPTABQ3T906 1256 aa17.81■□□□□ 0.44
TPM1-228ENST00000560975 FOXR2Q6PJQ5 311 aa17.81■□□□□ 0.44
TPM1-228ENST00000560975 MARCH10Q8NA82 808 aaPredicted RBP17.81■□□□□ 0.44
TPM1-228ENST00000560975 TGFBRAP1Q8WUH2 860 aa17.81■□□□□ 0.44
TPM1-228ENST00000560975 DDX23Q9BUQ8 820 aaKnown RBP17.81■□□□□ 0.44
TPM1-228ENST00000560975 ANKRD63C9JTQ0 380 aa17.81■□□□□ 0.44
TPM1-228ENST00000560975 ACSL3O95573 720 aa17.81■□□□□ 0.44
TPM1-228ENST00000560975 GH1P01241 217 aa17.81■□□□□ 0.44
TPM1-228ENST00000560975 PDHA1P08559 390 aa17.81■□□□□ 0.44
TPM1-228ENST00000560975 CASP4P49662 377 aa17.81■□□□□ 0.44
TPM1-228ENST00000560975 LLGL1Q15334 1064 aa17.81■□□□□ 0.44
TPM1-228ENST00000560975 CTNNBL1Q8WYA6 563 aaPredicted RBP17.81■□□□□ 0.44
TPM1-228ENST00000560975 ARHGEF2Q92974 986 aaKnown RBP17.81■□□□□ 0.44
TPM1-228ENST00000560975 ETNK1Q9HBU6 452 aa17.81■□□□□ 0.44
TPM1-228ENST00000560975 TTC7AQ9ULT0 858 aaPredicted RBP17.81■□□□□ 0.44
TPM1-228ENST00000560975 NENFQ9UMX5 172 aa17.81■□□□□ 0.44
TPM1-228ENST00000560975 ARL2BPQ9Y2Y0 163 aa17.81■□□□□ 0.44
TPM1-228ENST00000560975 COL22A1Q8NFW1 1626 aaPredicted RBP17.81■□□□□ 0.44
TPM1-228ENST00000560975 CTCFP49711 727 aaPredicted RBP17.8■□□□□ 0.44
TPM1-228ENST00000560975 ADCY7P51828 1080 aa17.8■□□□□ 0.44
TPM1-228ENST00000560975 MAPKAPK5Q8IW41 473 aa17.8■□□□□ 0.44
TPM1-228ENST00000560975 TBC1D16Q8TBP0 767 aa17.8■□□□□ 0.44
TPM1-228ENST00000560975 STMN4Q9H169 189 aaPredicted RBP17.8■□□□□ 0.44
TPM1-228ENST00000560975 SIX2Q9NPC8 291 aa17.8■□□□□ 0.44
TPM1-228ENST00000560975 CTNNAL1Q9UBT7 734 aa17.8■□□□□ 0.44
TPM1-228ENST00000560975 DDX25Q9UHL0 483 aaKnown RBP17.8■□□□□ 0.44
TPM1-228ENST00000560975 ZMYND8Q9ULU4 1186 aaPredicted RBP17.8■□□□□ 0.44
TPM1-228ENST00000560975 COL5A2P05997 1499 aaPredicted RBP17.8■□□□□ 0.44
TPM1-228ENST00000560975 TAF1P21675 1872 aa17.8■□□□□ 0.44
TPM1-228ENST00000560975 USP17L5A8MUK1 530 aa17.8■□□□□ 0.44
TPM1-228ENST00000560975 AKAP3O75969 853 aa17.8■□□□□ 0.44
TPM1-228ENST00000560975 ATP4AP20648 1035 aa17.8■□□□□ 0.44
TPM1-228ENST00000560975 MARCKSL1P49006 195 aa17.8■□□□□ 0.44
TPM1-228ENST00000560975 DHX34Q14147 1143 aaKnown RBP17.8■□□□□ 0.44
TPM1-228ENST00000560975 EPHA7Q15375 998 aa17.8■□□□□ 0.44
TPM1-228ENST00000560975 TTC27Q6P3X3 843 aa17.8■□□□□ 0.44
TPM1-228ENST00000560975 RFFLQ8WZ73 363 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms