RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 PARNO95453 639 aaKnown RBP8.97□□□□□ -0.97
LRRC28-219ENST00000560483 PFKMP08237 780 aa8.97□□□□□ -0.97
LRRC28-219ENST00000560483 CD46P15529 392 aa8.97□□□□□ -0.97
LRRC28-219ENST00000560483 PDCP20941 246 aa8.97□□□□□ -0.97
LRRC28-219ENST00000560483 KLRC1P26715 233 aa8.97□□□□□ -0.97
LRRC28-219ENST00000560483 TMOD1P28289 359 aa8.97□□□□□ -0.97
LRRC28-219ENST00000560483 EPHB4P54760 987 aa8.97□□□□□ -0.97
LRRC28-219ENST00000560483 PRKCEQ02156 737 aa8.97□□□□□ -0.97
LRRC28-219ENST00000560483 CYP4A11Q02928 519 aa8.97□□□□□ -0.97
LRRC28-219ENST00000560483 TBC1D8BQ0IIM8 1120 aa8.97□□□□□ -0.97
LRRC28-219ENST00000560483 ZRSR1Q15695 479 aaKnown RBP8.97□□□□□ -0.97
LRRC28-219ENST00000560483 ZNF484Q5JVG2 852 aa8.97□□□□□ -0.97
LRRC28-219ENST00000560483 IER5Q5VY09 327 aa8.97□□□□□ -0.97
LRRC28-219ENST00000560483 RUFY4Q6ZNE9 571 aa8.97□□□□□ -0.97
LRRC28-219ENST00000560483 SERINC5Q86VE9 423 aa8.97□□□□□ -0.97
LRRC28-219ENST00000560483 TPH2Q8IWU9 490 aa8.97□□□□□ -0.97
LRRC28-219ENST00000560483 ETNPPLQ8TBG4 499 aa8.97□□□□□ -0.97
LRRC28-219ENST00000560483 DHX38Q92620 1227 aaKnown RBP8.97□□□□□ -0.97
LRRC28-219ENST00000560483 SYMPKQ92797 1274 aaKnown RBP8.97□□□□□ -0.97
LRRC28-219ENST00000560483 MAP7D2Q96T17 732 aa8.97□□□□□ -0.97
LRRC28-219ENST00000560483 TTC12Q9H892 705 aaPredicted RBP8.97□□□□□ -0.97
LRRC28-219ENST00000560483 AKT3Q9Y243 479 aa8.97□□□□□ -0.97
LRRC28-219ENST00000560483 WDR81Q562E7 1941 aa8.96□□□□□ -0.97
LRRC28-219ENST00000560483 KIF28PB7ZC32 967 aa8.96□□□□□ -0.98
LRRC28-219ENST00000560483 TBX3O15119 743 aa8.96□□□□□ -0.98
LRRC28-219ENST00000560483 OR52Z1P0C646 297 aa8.96□□□□□ -0.98
LRRC28-219ENST00000560483 TECP42680 631 aa8.96□□□□□ -0.98
LRRC28-219ENST00000560483 PSMC5P62195 406 aa8.96□□□□□ -0.98
LRRC28-219ENST00000560483 IKBKEQ14164 716 aa8.96□□□□□ -0.98
LRRC28-219ENST00000560483 CTTNQ14247 550 aaKnown RBP8.96□□□□□ -0.98
LRRC28-219ENST00000560483 TMEM240Q5SV17 173 aa8.96□□□□□ -0.98
LRRC28-219ENST00000560483 FAM117BQ6P1L5 589 aa8.96□□□□□ -0.98
LRRC28-219ENST00000560483 MTHFD1LQ6UB35 978 aa8.96□□□□□ -0.98
LRRC28-219ENST00000560483 FERMT3Q86UX7 667 aa8.96□□□□□ -0.98
LRRC28-219ENST00000560483 RDM1Q8NG50 284 aa8.96□□□□□ -0.98
LRRC28-219ENST00000560483 ERMNQ8TAM6 284 aa8.96□□□□□ -0.98
LRRC28-219ENST00000560483 TNFRSF25Q93038 417 aa8.96□□□□□ -0.98
LRRC28-219ENST00000560483 WNT8BQ93098 351 aa8.96□□□□□ -0.98
LRRC28-219ENST00000560483 DYDC2Q96IM9 177 aa8.96□□□□□ -0.98
LRRC28-219ENST00000560483 FAM161BQ96MY7 647 aa8.96□□□□□ -0.98
LRRC28-219ENST00000560483 USB1Q9BQ65 265 aaKnown RBP8.96□□□□□ -0.98
LRRC28-219ENST00000560483 SH2D3AQ9BRG2 576 aa8.96□□□□□ -0.98
LRRC28-219ENST00000560483 RAB34Q9BZG1 259 aa8.96□□□□□ -0.98
LRRC28-219ENST00000560483 MSRAQ9UJ68 235 aa8.96□□□□□ -0.98
LRRC28-219ENST00000560483 MAFBQ9Y5Q3 323 aaPredicted RBP8.96□□□□□ -0.98
LRRC28-219ENST00000560483 RANBP2P49792 3224 aaKnown RBP8.96□□□□□ -0.98
LRRC28-219ENST00000560483 TANC1Q9C0D5 1861 aa8.96□□□□□ -0.98
LRRC28-219ENST00000560483 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.95□□□□□ -0.98
LRRC28-219ENST00000560483 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.95□□□□□ -0.98
LRRC28-219ENST00000560483 EML1O00423 815 aa8.95□□□□□ -0.98
LRRC28-219ENST00000560483 EDIL3O43854 480 aa8.95□□□□□ -0.98
LRRC28-219ENST00000560483 RPLP2P05387 115 aaKnown RBP8.95□□□□□ -0.98
LRRC28-219ENST00000560483 P4HBP07237 508 aaKnown RBP8.95□□□□□ -0.98
LRRC28-219ENST00000560483 GHRP10912 638 aa8.95□□□□□ -0.98
LRRC28-219ENST00000560483 QARSP47897 775 aaKnown RBP8.95□□□□□ -0.98
LRRC28-219ENST00000560483 TRAPPC10P48553 1259 aa8.95□□□□□ -0.98
LRRC28-219ENST00000560483 DNM2P50570 870 aa8.95□□□□□ -0.98
LRRC28-219ENST00000560483 POLGP54098 1239 aaPredicted RBP8.95□□□□□ -0.98
LRRC28-219ENST00000560483 MRPS6P82932 125 aaKnown RBP8.95□□□□□ -0.98
LRRC28-219ENST00000560483 PPP2R5CQ13362 524 aa8.95□□□□□ -0.98
LRRC28-219ENST00000560483 UGCGQ16739 394 aa8.95□□□□□ -0.98
LRRC28-219ENST00000560483 XKR9Q5GH70 373 aa8.95□□□□□ -0.98
LRRC28-219ENST00000560483 XKR3Q5GH77 459 aa8.95□□□□□ -0.98
LRRC28-219ENST00000560483 FOXD4L5Q5VV16 416 aaPredicted RBP8.95□□□□□ -0.98
LRRC28-219ENST00000560483 PLA2G4FQ68DD2 849 aa8.95□□□□□ -0.98
LRRC28-219ENST00000560483 PTCRAQ6ISU1 281 aaPredicted RBP8.95□□□□□ -0.98
LRRC28-219ENST00000560483 EFCAB12Q6NXP0 572 aa8.95□□□□□ -0.98
LRRC28-219ENST00000560483 CNKSR3Q6P9H4 555 aa8.95□□□□□ -0.98
LRRC28-219ENST00000560483 OTUD6AQ7L8S5 288 aa8.95□□□□□ -0.98
LRRC28-219ENST00000560483 LRRC71Q8N4P6 559 aa8.95□□□□□ -0.98
LRRC28-219ENST00000560483 RASSF8Q8NHQ8 419 aa8.95□□□□□ -0.98
LRRC28-219ENST00000560483 FOXD4L4Q8WXT5 416 aaPredicted RBP8.95□□□□□ -0.98
LRRC28-219ENST00000560483 SEPT8Q92599 483 aa8.95□□□□□ -0.98
LRRC28-219ENST00000560483 HAS1Q92839 578 aa8.95□□□□□ -0.98
LRRC28-219ENST00000560483 CEP170P1Q96L14 293 aa8.95□□□□□ -0.98
LRRC28-219ENST00000560483 MBOAT7Q96N66 472 aa8.95□□□□□ -0.98
LRRC28-219ENST00000560483 LXNQ9BS40 222 aa8.95□□□□□ -0.98
LRRC28-219ENST00000560483 KCNMB3Q9NPA1 279 aa8.95□□□□□ -0.98
LRRC28-219ENST00000560483 VAV3Q9UKW4 847 aa8.95□□□□□ -0.98
LRRC28-219ENST00000560483 PCDHA2Q9Y5H9 948 aa8.95□□□□□ -0.98
LRRC28-219ENST00000560483 CDY2AQ9Y6F7 541 aa8.95□□□□□ -0.98
LRRC28-219ENST00000560483 IGSF9BQ9UPX0 1349 aa8.95□□□□□ -0.98
LRRC28-219ENST00000560483 COL1A2P08123 1366 aa8.95□□□□□ -0.98
LRRC28-219ENST00000560483 LAMA2P24043 3122 aaKnown RBP8.95□□□□□ -0.98
LRRC28-219ENST00000560483 LOXHD1Q8IVV2 1947 aa8.94□□□□□ -0.98
LRRC28-219ENST00000560483 IGKV6D-21A0A0A0MT36 114 aa8.94□□□□□ -0.98
LRRC28-219ENST00000560483 TMEM150BA6NC51 233 aa8.94□□□□□ -0.98
LRRC28-219ENST00000560483 GRXCR1A8MXD5 290 aa8.94□□□□□ -0.98
LRRC28-219ENST00000560483 SOX1O00570 391 aaPredicted RBP8.94□□□□□ -0.98
LRRC28-219ENST00000560483 MAGEB2O15479 319 aa8.94□□□□□ -0.98
LRRC28-219ENST00000560483 NBNO60934 754 aa8.94□□□□□ -0.98
LRRC28-219ENST00000560483 CAND2O75155 1236 aa8.94□□□□□ -0.98
LRRC28-219ENST00000560483 UPP2O95045 317 aa8.94□□□□□ -0.98
LRRC28-219ENST00000560483 VTNP04004 478 aa8.94□□□□□ -0.98
LRRC28-219ENST00000560483 ATP2A2P16615 1042 aaKnown RBP8.94□□□□□ -0.98
LRRC28-219ENST00000560483 FXR1P51114 621 aaKnown RBP eCLIP8.94□□□□□ -0.98
LRRC28-219ENST00000560483 CLCN3P51790 818 aa8.94□□□□□ -0.98
LRRC28-219ENST00000560483 CEBPZQ03701 1054 aaKnown RBP8.94□□□□□ -0.98
LRRC28-219ENST00000560483 PAK2Q13177 524 aa8.94□□□□□ -0.98
LRRC28-219ENST00000560483 EPHA7Q15375 998 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms