RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 Q6ZSN1 163 aa5.43□□□□□ -1.54
SPG11-218ENST00000559754 KIF18BQ86Y91 864 aa5.43□□□□□ -1.54
SPG11-218ENST00000559754 BCL6BQ8N143 479 aaPredicted RBP5.43□□□□□ -1.54
SPG11-218ENST00000559754 OR5AN1Q8NGI8 311 aa5.43□□□□□ -1.54
SPG11-218ENST00000559754 RABGGTAQ92696 567 aa5.43□□□□□ -1.54
SPG11-218ENST00000559754 SLC7A6OSQ96CW6 309 aaPredicted RBP5.43□□□□□ -1.54
SPG11-218ENST00000559754 C16orf92Q96LL3 132 aa5.43□□□□□ -1.54
SPG11-218ENST00000559754 PIF1Q9H611 641 aa5.43□□□□□ -1.54
SPG11-218ENST00000559754 IFT57Q9NWB7 429 aa5.43□□□□□ -1.54
SPG11-218ENST00000559754 SYNPO2Q9UMS6 1093 aa5.43□□□□□ -1.54
SPG11-218ENST00000559754 SPO11Q9Y5K1 396 aa5.43□□□□□ -1.54
SPG11-218ENST00000559754 CYR61O00622 381 aa5.42□□□□□ -1.54
SPG11-218ENST00000559754 AKAP8O43823 692 aaKnown RBP5.42□□□□□ -1.54
SPG11-218ENST00000559754 NEK4P51957 841 aa5.42□□□□□ -1.54
SPG11-218ENST00000559754 FOXL1Q12952 345 aa5.42□□□□□ -1.54
SPG11-218ENST00000559754 NRN1LQ496H8 165 aa5.42□□□□□ -1.54
SPG11-218ENST00000559754 USP39Q53GS9 565 aaKnown RBP5.42□□□□□ -1.54
SPG11-218ENST00000559754 RNF207Q6ZRF8 634 aa5.42□□□□□ -1.54
SPG11-218ENST00000559754 C16orf86Q6ZW13 317 aa5.42□□□□□ -1.54
SPG11-218ENST00000559754 BMP8AQ7Z5Y6 402 aa5.42□□□□□ -1.54
SPG11-218ENST00000559754 PHYKPLQ8IUZ5 450 aa5.42□□□□□ -1.54
SPG11-218ENST00000559754 PASD1Q8IV76 773 aa5.42□□□□□ -1.54
SPG11-218ENST00000559754 GPR135Q8IZ08 494 aa5.42□□□□□ -1.54
SPG11-218ENST00000559754 C7orf31Q8N865 590 aa5.42□□□□□ -1.54
SPG11-218ENST00000559754 SLC16A11Q8NCK7 471 aa5.42□□□□□ -1.54
SPG11-218ENST00000559754 GCDHQ92947 438 aaPredicted RBP5.42□□□□□ -1.54
SPG11-218ENST00000559754 RNPC3Q96LT9 517 aaKnown RBP5.42□□□□□ -1.54
SPG11-218ENST00000559754 MPHOSPH9Q99550 1183 aa5.42□□□□□ -1.54
SPG11-218ENST00000559754 SLC6A15Q9H2J7 730 aa5.42□□□□□ -1.54
SPG11-218ENST00000559754 AURKAIP1Q9NWT8 199 aaPredicted RBP5.42□□□□□ -1.54
SPG11-218ENST00000559754 USP35Q9P2H5 1018 aa5.42□□□□□ -1.54
SPG11-218ENST00000559754 A0A1W2PRX2 142 aa5.41□□□□□ -1.54
SPG11-218ENST00000559754 CYP27B1O15528 508 aa5.41□□□□□ -1.54
SPG11-218ENST00000559754 HSP90B1P14625 803 aaKnown RBP5.41□□□□□ -1.54
SPG11-218ENST00000559754 SLC9A1P19634 815 aa5.41□□□□□ -1.54
SPG11-218ENST00000559754 POU3F2P20265 443 aaPredicted RBP5.41□□□□□ -1.54
SPG11-218ENST00000559754 PTX3P26022 381 aaPredicted RBP5.41□□□□□ -1.54
SPG11-218ENST00000559754 RIN1Q13671 783 aa5.41□□□□□ -1.54
SPG11-218ENST00000559754 NINJ1Q92982 152 aa5.41□□□□□ -1.54
SPG11-218ENST00000559754 ELF4Q99607 663 aaPredicted RBP5.41□□□□□ -1.54
SPG11-218ENST00000559754 TOMM22Q9NS69 142 aa5.41□□□□□ -1.54
SPG11-218ENST00000559754 POLR3BQ9NW08 1133 aaPredicted RBP5.41□□□□□ -1.54
SPG11-218ENST00000559754 OXSMQ9NWU1 459 aa5.41□□□□□ -1.54
SPG11-218ENST00000559754 CD2APQ9Y5K6 639 aa5.41□□□□□ -1.54
SPG11-218ENST00000559754 DAPK3O43293 454 aa5.4□□□□□ -1.54
SPG11-218ENST00000559754 F2P00734 622 aa5.4□□□□□ -1.54
SPG11-218ENST00000559754 ACRV1P26436 265 aa5.4□□□□□ -1.54
SPG11-218ENST00000559754 HIBADHP31937 336 aaKnown RBP5.4□□□□□ -1.54
SPG11-218ENST00000559754 ADCY7P51828 1080 aa5.4□□□□□ -1.54
SPG11-218ENST00000559754 ATP2C1P98194 919 aaPredicted RBP5.4□□□□□ -1.54
SPG11-218ENST00000559754 ADCY2Q08462 1091 aa5.4□□□□□ -1.54
SPG11-218ENST00000559754 FOXE3Q13461 319 aa5.4□□□□□ -1.54
SPG11-218ENST00000559754 GAGE13Q4V321 117 aa5.4□□□□□ -1.54
SPG11-218ENST00000559754 SGMS1Q86VZ5 419 aa5.4□□□□□ -1.54
SPG11-218ENST00000559754 D2HGDHQ8N465 521 aa5.4□□□□□ -1.54
SPG11-218ENST00000559754 ZNF808Q8N4W9 903 aaPredicted RBP5.4□□□□□ -1.54
SPG11-218ENST00000559754 EFHBQ8N7U6 833 aa5.4□□□□□ -1.54
SPG11-218ENST00000559754 DYDC2Q96IM9 177 aa5.4□□□□□ -1.54
SPG11-218ENST00000559754 WDR92Q96MX6 357 aa5.4□□□□□ -1.54
SPG11-218ENST00000559754 PUS7Q96PZ0 661 aaKnown RBP5.4□□□□□ -1.54
SPG11-218ENST00000559754 ZNF341Q9BYN7 854 aa5.4□□□□□ -1.54
SPG11-218ENST00000559754 TLR9Q9NR96 1032 aa5.4□□□□□ -1.54
SPG11-218ENST00000559754 FANCLQ9NW38 375 aa5.4□□□□□ -1.54
SPG11-218ENST00000559754 GOLGA8BA8MQT2 603 aa5.39□□□□□ -1.55
SPG11-218ENST00000559754 KPNA6O60684 536 aa5.39□□□□□ -1.55
SPG11-218ENST00000559754 CDC45O75419 566 aa5.39□□□□□ -1.55
SPG11-218ENST00000559754 CD40P25942 277 aa5.39□□□□□ -1.55
SPG11-218ENST00000559754 ACVRL1P37023 503 aa5.39□□□□□ -1.55
SPG11-218ENST00000559754 BPIFB4P59827 614 aa5.39□□□□□ -1.55
SPG11-218ENST00000559754 SART3Q15020 963 aaKnown RBP5.39□□□□□ -1.55
SPG11-218ENST00000559754 MIIPQ5JXC2 388 aa5.39□□□□□ -1.55
SPG11-218ENST00000559754 CREB3L3Q68CJ9 461 aa5.39□□□□□ -1.55
SPG11-218ENST00000559754 KANSL1Q7Z3B3 1105 aa5.39□□□□□ -1.55
SPG11-218ENST00000559754 LRRTM3Q86VH5 581 aa5.39□□□□□ -1.55
SPG11-218ENST00000559754 NIM1KQ8IY84 436 aa5.39□□□□□ -1.55
SPG11-218ENST00000559754 AHI1Q8N157 1196 aa5.39□□□□□ -1.55
SPG11-218ENST00000559754 THEMISQ8N1K5 641 aaPredicted RBP5.39□□□□□ -1.55
SPG11-218ENST00000559754 Q8N1X5 172 aa5.39□□□□□ -1.55
SPG11-218ENST00000559754 ANKRD35Q8N283 1001 aa5.39□□□□□ -1.55
SPG11-218ENST00000559754 PPM1KQ8N3J5 372 aa5.39□□□□□ -1.55
SPG11-218ENST00000559754 NKD2Q969F2 451 aaPredicted RBP5.39□□□□□ -1.55
SPG11-218ENST00000559754 MAGEL2Q9UJ55 1249 aa5.39□□□□□ -1.55
SPG11-218ENST00000559754 PLAAQ9Y263 795 aa5.39□□□□□ -1.55
SPG11-218ENST00000559754 GIT1Q9Y2X7 761 aa5.39□□□□□ -1.55
SPG11-218ENST00000559754 RBM8AQ9Y5S9 174 aaKnown RBP5.39□□□□□ -1.55
SPG11-218ENST00000559754 CAPN14A8MX76 684 aa5.38□□□□□ -1.55
SPG11-218ENST00000559754 PRPF6O94906 941 aaKnown RBP5.38□□□□□ -1.55
SPG11-218ENST00000559754 ATP2A2P16615 1042 aaKnown RBP5.38□□□□□ -1.55
SPG11-218ENST00000559754 ANTXR2P58335 489 aa5.38□□□□□ -1.55
SPG11-218ENST00000559754 OCRLQ01968 901 aa5.38□□□□□ -1.55
SPG11-218ENST00000559754 TCIRG1Q13488 830 aa5.38□□□□□ -1.55
SPG11-218ENST00000559754 LRRC32Q14392 662 aa5.38□□□□□ -1.55
SPG11-218ENST00000559754 MYBPC3Q14896 1274 aa5.38□□□□□ -1.55
SPG11-218ENST00000559754 MAN2A1Q16706 1144 aa5.38□□□□□ -1.55
SPG11-218ENST00000559754 KIAA1841Q6NSI8 718 aa5.38□□□□□ -1.55
SPG11-218ENST00000559754 ESRP1Q6NXG1 681 aaKnown RBP5.38□□□□□ -1.55
SPG11-218ENST00000559754 CNNM4Q6P4Q7 775 aa5.38□□□□□ -1.55
SPG11-218ENST00000559754 C1orf210Q8IVY1 113 aa5.38□□□□□ -1.55
SPG11-218ENST00000559754 ANKRD53Q8N9V6 530 aa5.38□□□□□ -1.55
SPG11-218ENST00000559754 PLA2G15Q8NCC3 412 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms