RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 CKBP12277 381 aa13.8□□□□□ -0.2
GABPB1-208ENST00000558970 TMOD1P28289 359 aa13.8□□□□□ -0.2
GABPB1-208ENST00000558970 DNM2P50570 870 aa13.8□□□□□ -0.2
GABPB1-208ENST00000558970 MKRN4PQ13434 485 aaPredicted RBP13.8□□□□□ -0.2
GABPB1-208ENST00000558970 KIZQ2M2Z5 673 aa13.8□□□□□ -0.2
GABPB1-208ENST00000558970 ZNF618Q5T7W0 954 aa13.8□□□□□ -0.2
GABPB1-208ENST00000558970 TAF2Q6P1X5 1199 aa13.8□□□□□ -0.2
GABPB1-208ENST00000558970 KIAA0319LQ8IZA0 1049 aa13.8□□□□□ -0.2
GABPB1-208ENST00000558970 CCDC155Q8N6L0 562 aa13.8□□□□□ -0.2
GABPB1-208ENST00000558970 TRIM43Q96BQ3 446 aaPredicted RBP13.8□□□□□ -0.2
GABPB1-208ENST00000558970 NLRP4Q96MN2 994 aa13.8□□□□□ -0.2
GABPB1-208ENST00000558970 NOC4LQ9BVI4 516 aaKnown RBP13.8□□□□□ -0.2
GABPB1-208ENST00000558970 PRO3102Q9H379 93 aa13.8□□□□□ -0.2
GABPB1-208ENST00000558970 SUCLA2Q9P2R7 463 aaPredicted RBP13.8□□□□□ -0.2
GABPB1-208ENST00000558970 TBX21Q9UL17 535 aa13.8□□□□□ -0.2
GABPB1-208ENST00000558970 SMIM35A0A1B0GVV1 85 aa13.79□□□□□ -0.2
GABPB1-208ENST00000558970 MYMKA6NI61 221 aa13.79□□□□□ -0.2
GABPB1-208ENST00000558970 M0QZ92 97 aa13.79□□□□□ -0.2
GABPB1-208ENST00000558970 ACTN4O43707 911 aaKnown RBP13.79□□□□□ -0.2
GABPB1-208ENST00000558970 NR1I2O75469 434 aa13.79□□□□□ -0.2
GABPB1-208ENST00000558970 ZNF202O95125 648 aa13.79□□□□□ -0.2
GABPB1-208ENST00000558970 RAG1P15918 1043 aa13.79□□□□□ -0.2
GABPB1-208ENST00000558970 CYP11B2P19099 503 aa13.79□□□□□ -0.2
GABPB1-208ENST00000558970 ITGB8P26012 769 aa13.79□□□□□ -0.2
GABPB1-208ENST00000558970 NLRP11P59045 1033 aaKnown RBP13.79□□□□□ -0.2
GABPB1-208ENST00000558970 UBE2HP62256 183 aa13.79□□□□□ -0.2
GABPB1-208ENST00000558970 BFSP2Q13515 415 aa13.79□□□□□ -0.2
GABPB1-208ENST00000558970 TRIM71Q2Q1W2 868 aaKnown RBP13.79□□□□□ -0.2
GABPB1-208ENST00000558970 LONRF3Q496Y0 759 aa13.79□□□□□ -0.2
GABPB1-208ENST00000558970 ARSHQ5FYA8 562 aa13.79□□□□□ -0.2
GABPB1-208ENST00000558970 CLEC17AQ6ZS10 378 aa13.79□□□□□ -0.2
GABPB1-208ENST00000558970 C1orf186Q6ZWK4 172 aa13.79□□□□□ -0.2
GABPB1-208ENST00000558970 RSPH3Q86UC2 560 aa13.79□□□□□ -0.2
GABPB1-208ENST00000558970 CNNM3Q8NE01 707 aa13.79□□□□□ -0.2
GABPB1-208ENST00000558970 ASAP3Q8TDY4 903 aa13.79□□□□□ -0.2
GABPB1-208ENST00000558970 NLRP7Q8WX94 980 aa13.79□□□□□ -0.2
GABPB1-208ENST00000558970 OSMRQ99650 979 aa13.79□□□□□ -0.2
GABPB1-208ENST00000558970 JPH2Q9BR39 696 aaPredicted RBP13.79□□□□□ -0.2
GABPB1-208ENST00000558970 REEP2Q9BRK0 252 aa13.79□□□□□ -0.2
GABPB1-208ENST00000558970 BLZF1Q9H2G9 400 aa13.79□□□□□ -0.2
GABPB1-208ENST00000558970 LMBRD1Q9NUN5 540 aa13.79□□□□□ -0.2
GABPB1-208ENST00000558970 CDY2AQ9Y6F7 541 aa13.79□□□□□ -0.2
GABPB1-208ENST00000558970 SZT2Q5T011 3432 aa13.79□□□□□ -0.2
GABPB1-208ENST00000558970 IGKV6-21A0A0C4DH24 114 aa13.78□□□□□ -0.2
GABPB1-208ENST00000558970 CSDE1O75534 798 aaKnown RBP13.78□□□□□ -0.2
GABPB1-208ENST00000558970 SRGAP2CP0DJJ0 459 aa13.78□□□□□ -0.2
GABPB1-208ENST00000558970 IDEP14735 1019 aa13.78□□□□□ -0.2
GABPB1-208ENST00000558970 MRPS6P82932 125 aaKnown RBP13.78□□□□□ -0.2
GABPB1-208ENST00000558970 FAM160A1Q05DH4 1040 aa13.78□□□□□ -0.2
GABPB1-208ENST00000558970 CHRDL2Q6WN34 429 aa13.78□□□□□ -0.2
GABPB1-208ENST00000558970 LRRC8DQ7L1W4 858 aa13.78□□□□□ -0.2
GABPB1-208ENST00000558970 DEFB128Q7Z7B8 93 aa13.78□□□□□ -0.2
GABPB1-208ENST00000558970 LINC01465Q8N7H1 131 aa13.78□□□□□ -0.2
GABPB1-208ENST00000558970 MCPH1Q8NEM0 835 aa13.78□□□□□ -0.2
GABPB1-208ENST00000558970 TCP11Q8WWU5 503 aa13.78□□□□□ -0.2
GABPB1-208ENST00000558970 PRPF31Q8WWY3 499 aaKnown RBP13.78□□□□□ -0.2
GABPB1-208ENST00000558970 PSPC1Q8WXF1 523 aaKnown RBP13.78□□□□□ -0.2
GABPB1-208ENST00000558970 BSNDQ8WZ55 320 aa13.78□□□□□ -0.2
GABPB1-208ENST00000558970 OSBPL7Q9BZF2 842 aa13.78□□□□□ -0.2
GABPB1-208ENST00000558970 WNT8AQ9H1J5 351 aa13.78□□□□□ -0.2
GABPB1-208ENST00000558970 CDHR5Q9HBB8 845 aa13.78□□□□□ -0.2
GABPB1-208ENST00000558970 PPME1Q9Y570 386 aa13.78□□□□□ -0.2
GABPB1-208ENST00000558970 COL4A3BPQ9Y5P4 624 aa13.78□□□□□ -0.2
GABPB1-208ENST00000558970 NR2E3Q9Y5X4 410 aa13.78□□□□□ -0.2
GABPB1-208ENST00000558970 A0A1W2PPC1 479 aa13.77□□□□□ -0.21
GABPB1-208ENST00000558970 LRRIQ4A6NIV6 560 aa13.77□□□□□ -0.21
GABPB1-208ENST00000558970 TBCAO75347 108 aaKnown RBP13.77□□□□□ -0.21
GABPB1-208ENST00000558970 FAM13AO94988 1023 aa13.77□□□□□ -0.21
GABPB1-208ENST00000558970 CHRNA1P02708 482 aa13.77□□□□□ -0.21
GABPB1-208ENST00000558970 SLFN14P0C7P3 912 aa13.77□□□□□ -0.21
GABPB1-208ENST00000558970 PRR29P0C7W0 189 aa13.77□□□□□ -0.21
GABPB1-208ENST00000558970 FGFR4P22455 802 aa13.77□□□□□ -0.21
GABPB1-208ENST00000558970 ASIC1P78348 528 aa13.77□□□□□ -0.21
GABPB1-208ENST00000558970 MDM2Q00987 491 aaPredicted RBP13.77□□□□□ -0.21
GABPB1-208ENST00000558970 LAMTOR4Q0VGL1 99 aa13.77□□□□□ -0.21
GABPB1-208ENST00000558970 SNW1Q13573 536 aaKnown RBP13.77□□□□□ -0.21
GABPB1-208ENST00000558970 IER5Q5VY09 327 aa13.77□□□□□ -0.21
GABPB1-208ENST00000558970 KRBA2Q6ZNG9 492 aa13.77□□□□□ -0.21
GABPB1-208ENST00000558970 EXOC8Q8IYI6 725 aa13.77□□□□□ -0.21
GABPB1-208ENST00000558970 FMR1NBQ8N0W7 255 aaPredicted RBP13.77□□□□□ -0.21
GABPB1-208ENST00000558970 RNF149Q8NC42 400 aa13.77□□□□□ -0.21
GABPB1-208ENST00000558970 CAGE1Q8TC20 777 aa13.77□□□□□ -0.21
GABPB1-208ENST00000558970 DDX12PQ92771 950 aa13.77□□□□□ -0.21
GABPB1-208ENST00000558970 ERCC4Q92889 916 aaPredicted RBP13.77□□□□□ -0.21
GABPB1-208ENST00000558970 BADQ92934 168 aa13.77□□□□□ -0.21
GABPB1-208ENST00000558970 PAGE5Q96GU1 130 aa13.77□□□□□ -0.21
GABPB1-208ENST00000558970 PYM1Q9BRP8 204 aaKnown RBP13.77□□□□□ -0.21
GABPB1-208ENST00000558970 KIFC3Q9BVG8 833 aa13.77□□□□□ -0.21
GABPB1-208ENST00000558970 CUEDC2Q9H467 287 aa13.77□□□□□ -0.21
GABPB1-208ENST00000558970 TRPV2Q9Y5S1 764 aa13.77□□□□□ -0.21
GABPB1-208ENST00000558970 A0A087WZ62 844 aa13.76□□□□□ -0.21
GABPB1-208ENST00000558970 FAM237AA0A1B0GTK4 181 aa13.76□□□□□ -0.21
GABPB1-208ENST00000558970 CCDC169A6NNP5 214 aa13.76□□□□□ -0.21
GABPB1-208ENST00000558970 KIAA0355O15063 1070 aa13.76□□□□□ -0.21
GABPB1-208ENST00000558970 GAS2O43903 313 aaKnown RBP13.76□□□□□ -0.21
GABPB1-208ENST00000558970 KINO60870 393 aaKnown RBP13.76□□□□□ -0.21
GABPB1-208ENST00000558970 TIMP1P01033 207 aa13.76□□□□□ -0.21
GABPB1-208ENST00000558970 GHRP10912 638 aa13.76□□□□□ -0.21
GABPB1-208ENST00000558970 SELPP16109 830 aa13.76□□□□□ -0.21
GABPB1-208ENST00000558970 GLRA2P23416 452 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms