RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 TBC1D22BQ9NU19 505 aa18.12■□□□□ 0.49
CDC42BPB-203ENST00000558867 SNX14Q9Y5W7 946 aa18.12■□□□□ 0.49
CDC42BPB-203ENST00000558867 CA8P35219 290 aa18.11■□□□□ 0.49
CDC42BPB-203ENST00000558867 CCDC60Q8IWA6 550 aaPredicted RBP18.11■□□□□ 0.49
CDC42BPB-203ENST00000558867 RSPH1Q8WYR4 309 aa18.11■□□□□ 0.49
CDC42BPB-203ENST00000558867 ADAM7Q9H2U9 754 aa18.11■□□□□ 0.49
CDC42BPB-203ENST00000558867 AKT3Q9Y243 479 aa18.11■□□□□ 0.49
CDC42BPB-203ENST00000558867 HIDE1A8MVS5 230 aa18.1■□□□□ 0.49
CDC42BPB-203ENST00000558867 PROB1E7EW31 1015 aa18.1■□□□□ 0.49
CDC42BPB-203ENST00000558867 IPO5O00410 1097 aaKnown RBP18.1■□□□□ 0.49
CDC42BPB-203ENST00000558867 CD2BP2O95400 341 aaKnown RBP18.1■□□□□ 0.49
CDC42BPB-203ENST00000558867 CCNE2O96020 404 aa18.1■□□□□ 0.49
CDC42BPB-203ENST00000558867 PSAPP07602 524 aa18.1■□□□□ 0.49
CDC42BPB-203ENST00000558867 SP100P23497 879 aaPredicted RBP18.1■□□□□ 0.49
CDC42BPB-203ENST00000558867 ALDH7A1P49419 539 aaKnown RBP18.1■□□□□ 0.49
CDC42BPB-203ENST00000558867 RNF20Q5VTR2 975 aa18.1■□□□□ 0.49
CDC42BPB-203ENST00000558867 ZNF746Q6NUN9 644 aaPredicted RBP18.1■□□□□ 0.49
CDC42BPB-203ENST00000558867 RAB11FIP4Q86YS3 637 aa18.1■□□□□ 0.49
CDC42BPB-203ENST00000558867 SMAP1Q8IYB5 467 aaPredicted RBP18.1■□□□□ 0.49
CDC42BPB-203ENST00000558867 PLCD3Q8N3E9 789 aa18.1■□□□□ 0.49
CDC42BPB-203ENST00000558867 MRPL43Q8N983 215 aaKnown RBP18.1■□□□□ 0.49
CDC42BPB-203ENST00000558867 PGBD1Q96JS3 809 aa18.1■□□□□ 0.49
CDC42BPB-203ENST00000558867 FAM167AQ96KS9 214 aa18.1■□□□□ 0.49
CDC42BPB-203ENST00000558867 CASD1Q96PB1 797 aa18.1■□□□□ 0.49
CDC42BPB-203ENST00000558867 PPP1R16BQ96T49 567 aa18.1■□□□□ 0.49
CDC42BPB-203ENST00000558867 ZNF577Q9BSK1 485 aa18.1■□□□□ 0.49
CDC42BPB-203ENST00000558867 MRPL9Q9BYD2 267 aaKnown RBP18.1■□□□□ 0.49
CDC42BPB-203ENST00000558867 MFSD1Q9H3U5 465 aa18.1■□□□□ 0.49
CDC42BPB-203ENST00000558867 GPR32O75388 356 aa18.09■□□□□ 0.49
CDC42BPB-203ENST00000558867 C22orf31O95567 290 aa18.09■□□□□ 0.49
CDC42BPB-203ENST00000558867 EOMESO95936 686 aa18.09■□□□□ 0.49
CDC42BPB-203ENST00000558867 VTNP04004 478 aa18.09■□□□□ 0.49
CDC42BPB-203ENST00000558867 SETQ01105 290 aaPredicted RBP18.09■□□□□ 0.49
CDC42BPB-203ENST00000558867 GIT2Q14161 759 aa18.09■□□□□ 0.49
CDC42BPB-203ENST00000558867 DSC3Q14574 896 aa18.09■□□□□ 0.49
CDC42BPB-203ENST00000558867 TMEM169Q96HH4 297 aa18.09■□□□□ 0.49
CDC42BPB-203ENST00000558867 SCLT1Q96NL6 688 aa18.09■□□□□ 0.49
CDC42BPB-203ENST00000558867 DZANK1Q9NVP4 752 aa18.09■□□□□ 0.49
CDC42BPB-203ENST00000558867 BARHL2Q9NY43 387 aa18.09■□□□□ 0.49
CDC42BPB-203ENST00000558867 DACT1Q9NYF0 836 aa18.09■□□□□ 0.49
CDC42BPB-203ENST00000558867 HCSTQ9UBK5 93 aa18.09■□□□□ 0.49
CDC42BPB-203ENST00000558867 PCDHA10Q9Y5I2 948 aa18.09■□□□□ 0.49
CDC42BPB-203ENST00000558867 MAFBQ9Y5Q3 323 aaPredicted RBP18.09■□□□□ 0.49
CDC42BPB-203ENST00000558867 EVPLQ92817 2033 aa18.09■□□□□ 0.49
CDC42BPB-203ENST00000558867 PTPRZ1P23471 2315 aaPredicted RBP18.08■□□□□ 0.48
CDC42BPB-203ENST00000558867 SLC27A2O14975 620 aa18.08■□□□□ 0.48
CDC42BPB-203ENST00000558867 EIF4BP23588 611 aaKnown RBP18.08■□□□□ 0.48
CDC42BPB-203ENST00000558867 DDIT3P35638 169 aa18.08■□□□□ 0.48
CDC42BPB-203ENST00000558867 NLRP11P59045 1033 aaKnown RBP18.08■□□□□ 0.48
CDC42BPB-203ENST00000558867 RTN1Q16799 776 aa18.08■□□□□ 0.48
CDC42BPB-203ENST00000558867 ATAT1Q5SQI0 421 aa18.08■□□□□ 0.48
CDC42BPB-203ENST00000558867 ECHDC2Q86YB7 292 aa18.08■□□□□ 0.48
CDC42BPB-203ENST00000558867 TDRD5Q8NAT2 981 aaKnown RBP18.08■□□□□ 0.48
CDC42BPB-203ENST00000558867 RNF169Q8NCN4 708 aa18.08■□□□□ 0.48
CDC42BPB-203ENST00000558867 NRBP2Q9NSY0 501 aa18.08■□□□□ 0.48
CDC42BPB-203ENST00000558867 CIZ1Q9ULV3 898 aaPredicted RBP18.08■□□□□ 0.48
CDC42BPB-203ENST00000558867 SAMM50Q9Y512 469 aa18.08■□□□□ 0.48
CDC42BPB-203ENST00000558867 HCFC2Q9Y5Z7 792 aa18.08■□□□□ 0.48
CDC42BPB-203ENST00000558867 V9GY48 417 aaPredicted RBP18.08■□□□□ 0.48
CDC42BPB-203ENST00000558867 CFAP54Q96N23 3096 aa18.07■□□□□ 0.48
CDC42BPB-203ENST00000558867 CNTNAP5Q8WYK1 1306 aa18.07■□□□□ 0.48
CDC42BPB-203ENST00000558867 C2orf71A6NGG8 1288 aa18.07■□□□□ 0.48
CDC42BPB-203ENST00000558867 ZBTB42B2RXF5 422 aa18.07■□□□□ 0.48
CDC42BPB-203ENST00000558867 ZBTB43O43298 467 aa18.07■□□□□ 0.48
CDC42BPB-203ENST00000558867 CXCL14O95715 111 aa18.07■□□□□ 0.48
CDC42BPB-203ENST00000558867 NEK4P51957 841 aa18.07■□□□□ 0.48
CDC42BPB-203ENST00000558867 CDC42EP1Q00587 391 aa18.07■□□□□ 0.48
CDC42BPB-203ENST00000558867 CREB3L3Q68CJ9 461 aa18.07■□□□□ 0.48
CDC42BPB-203ENST00000558867 EFCAB12Q6NXP0 572 aa18.07■□□□□ 0.48
CDC42BPB-203ENST00000558867 LRRC55Q6ZSA7 311 aa18.07■□□□□ 0.48
CDC42BPB-203ENST00000558867 TRMT1LQ7Z2T5 733 aaKnown RBP18.07■□□□□ 0.48
CDC42BPB-203ENST00000558867 CCDC12Q8WUD4 166 aaPredicted RBP18.07■□□□□ 0.48
CDC42BPB-203ENST00000558867 LRRC2Q9BYS8 371 aa18.07■□□□□ 0.48
CDC42BPB-203ENST00000558867 POMKQ9H5K3 350 aa18.07■□□□□ 0.48
CDC42BPB-203ENST00000558867 DBR1Q9UK59 544 aaKnown RBP18.07■□□□□ 0.48
CDC42BPB-203ENST00000558867 C2CD4DB7Z1M9 353 aa18.06■□□□□ 0.48
CDC42BPB-203ENST00000558867 FAM86B1E9PN63 330 aa18.06■□□□□ 0.48
CDC42BPB-203ENST00000558867 DHX15O43143 795 aaKnown RBP18.06■□□□□ 0.48
CDC42BPB-203ENST00000558867 PDGFBP01127 241 aaPredicted RBP18.06■□□□□ 0.48
CDC42BPB-203ENST00000558867 CYP3A4P08684 503 aa18.06■□□□□ 0.48
CDC42BPB-203ENST00000558867 FAM86B2P0C5J1 330 aa18.06■□□□□ 0.48
CDC42BPB-203ENST00000558867 KRT32Q14532 448 aa18.06■□□□□ 0.48
CDC42BPB-203ENST00000558867 ASTLQ6HA08 431 aaPredicted RBP18.06■□□□□ 0.48
CDC42BPB-203ENST00000558867 APOA5Q6Q788 366 aa18.06■□□□□ 0.48
CDC42BPB-203ENST00000558867 RASEFQ8IZ41 740 aa18.06■□□□□ 0.48
CDC42BPB-203ENST00000558867 ZDHHC14Q8IZN3 488 aa18.06■□□□□ 0.48
CDC42BPB-203ENST00000558867 SLC39A11Q8N1S5 342 aa18.06■□□□□ 0.48
CDC42BPB-203ENST00000558867 ACSF2Q96CM8 615 aaPredicted RBP18.06■□□□□ 0.48
CDC42BPB-203ENST00000558867 GABBR1Q9UBS5 961 aa18.06■□□□□ 0.48
CDC42BPB-203ENST00000558867 USTQ9Y2C2 406 aa18.06■□□□□ 0.48
CDC42BPB-203ENST00000558867 MYH9P35579 1960 aaKnown RBP18.06■□□□□ 0.48
CDC42BPB-203ENST00000558867 A0A0U1RQF3 1178 aa18.05■□□□□ 0.48
CDC42BPB-203ENST00000558867 CLASP2O75122 1294 aaKnown RBP18.05■□□□□ 0.48
CDC42BPB-203ENST00000558867 BRD1O95696 1058 aa18.05■□□□□ 0.48
CDC42BPB-203ENST00000558867 SKIP12755 728 aa18.05■□□□□ 0.48
CDC42BPB-203ENST00000558867 ATP4AP20648 1035 aa18.05■□□□□ 0.48
CDC42BPB-203ENST00000558867 PSMA5P28066 241 aa18.05■□□□□ 0.48
CDC42BPB-203ENST00000558867 NBL1P41271 181 aa18.05■□□□□ 0.48
CDC42BPB-203ENST00000558867 CLK2P49760 499 aaKnown RBP18.05■□□□□ 0.48
CDC42BPB-203ENST00000558867 CLCN3P51790 818 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms