RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 KCNA5P22460 613 aa9.11□□□□□ -0.95
TRAF3-205ENST00000558700 KLRC1P26715 233 aa9.11□□□□□ -0.95
TRAF3-205ENST00000558700 SFNP31947 248 aa9.11□□□□□ -0.95
TRAF3-205ENST00000558700 JAK3P52333 1124 aa9.11□□□□□ -0.95
TRAF3-205ENST00000558700 NLRP5P59047 1200 aa9.11□□□□□ -0.95
TRAF3-205ENST00000558700 GUCA2AQ02747 115 aa9.11□□□□□ -0.95
TRAF3-205ENST00000558700 SWT1Q5T5J6 900 aaKnown RBP9.11□□□□□ -0.95
TRAF3-205ENST00000558700 SWSAP1Q6NVH7 229 aa9.11□□□□□ -0.95
TRAF3-205ENST00000558700 MAMSTRQ6ZN01 415 aa9.11□□□□□ -0.95
TRAF3-205ENST00000558700 CMTR2Q8IYT2 770 aaKnown RBP9.11□□□□□ -0.95
TRAF3-205ENST00000558700 LRRN4Q8WUT4 740 aa9.11□□□□□ -0.95
TRAF3-205ENST00000558700 CLP1Q92989 425 aaKnown RBP9.11□□□□□ -0.95
TRAF3-205ENST00000558700 LENG9Q96B70 501 aa9.11□□□□□ -0.95
TRAF3-205ENST00000558700 MAP7D2Q96T17 732 aa9.11□□□□□ -0.95
TRAF3-205ENST00000558700 PLVAPQ9BX97 442 aa9.11□□□□□ -0.95
TRAF3-205ENST00000558700 TEKT3Q9BXF9 490 aa9.11□□□□□ -0.95
TRAF3-205ENST00000558700 TM6SF1Q9BZW5 370 aa9.11□□□□□ -0.95
TRAF3-205ENST00000558700 AGO3Q9H9G7 860 aaKnown RBP9.11□□□□□ -0.95
TRAF3-205ENST00000558700 LRFN2Q9ULH4 789 aa9.11□□□□□ -0.95
TRAF3-205ENST00000558700 PADI3Q9ULW8 664 aa9.11□□□□□ -0.95
TRAF3-205ENST00000558700 GINS2Q9Y248 185 aa9.11□□□□□ -0.95
TRAF3-205ENST00000558700 PCDHA10Q9Y5I2 948 aa9.11□□□□□ -0.95
TRAF3-205ENST00000558700 MAFBQ9Y5Q3 323 aaPredicted RBP9.11□□□□□ -0.95
TRAF3-205ENST00000558700 BDP1A6H8Y1 2624 aa9.11□□□□□ -0.95
TRAF3-205ENST00000558700 FNDC1Q4ZHG4 1894 aaPredicted RBP9.11□□□□□ -0.95
TRAF3-205ENST00000558700 ZBTB42B2RXF5 422 aa9.1□□□□□ -0.95
TRAF3-205ENST00000558700 ENPP3O14638 875 aa9.1□□□□□ -0.95
TRAF3-205ENST00000558700 GAS7O60861 476 aa9.1□□□□□ -0.95
TRAF3-205ENST00000558700 PPFIA3O75145 1194 aa9.1□□□□□ -0.95
TRAF3-205ENST00000558700 RPS6KA5O75582 802 aa9.1□□□□□ -0.95
TRAF3-205ENST00000558700 DGKIO75912 1065 aa9.1□□□□□ -0.95
TRAF3-205ENST00000558700 CDKL5O76039 1030 aa9.1□□□□□ -0.95
TRAF3-205ENST00000558700 C22orf31O95567 290 aa9.1□□□□□ -0.95
TRAF3-205ENST00000558700 MMP1P03956 469 aa9.1□□□□□ -0.95
TRAF3-205ENST00000558700 LINC00271P0C7V0 271 aa9.1□□□□□ -0.95
TRAF3-205ENST00000558700 BMPR1AP36894 532 aa9.1□□□□□ -0.95
TRAF3-205ENST00000558700 CCT2P78371 535 aaKnown RBP9.1□□□□□ -0.95
TRAF3-205ENST00000558700 SSRP1Q08945 709 aaKnown RBP9.1□□□□□ -0.95
TRAF3-205ENST00000558700 TOB2Q14106 344 aaPredicted RBP9.1□□□□□ -0.95
TRAF3-205ENST00000558700 TMEM266Q2M3C6 531 aa9.1□□□□□ -0.95
TRAF3-205ENST00000558700 PUS10Q3MIT2 529 aaKnown RBP9.1□□□□□ -0.95
TRAF3-205ENST00000558700 LEXMQ3ZCV2 418 aa9.1□□□□□ -0.95
TRAF3-205ENST00000558700 TCEAL5Q5H9L2 206 aa9.1□□□□□ -0.95
TRAF3-205ENST00000558700 DAGLBQ8NCG7 672 aa9.1□□□□□ -0.95
TRAF3-205ENST00000558700 PPP2R3CQ969Q6 453 aa9.1□□□□□ -0.95
TRAF3-205ENST00000558700 ZNF689Q96CS4 500 aaPredicted RBP9.1□□□□□ -0.95
TRAF3-205ENST00000558700 PABPC5Q96DU9 382 aaKnown RBP9.1□□□□□ -0.95
TRAF3-205ENST00000558700 ZNF274Q96GC6 653 aaPredicted RBP9.1□□□□□ -0.95
TRAF3-205ENST00000558700 RIT2Q99578 217 aa9.1□□□□□ -0.95
TRAF3-205ENST00000558700 C1QTNF1Q9BXJ1 281 aa9.1□□□□□ -0.95
TRAF3-205ENST00000558700 ALG2Q9H553 416 aa9.1□□□□□ -0.95
TRAF3-205ENST00000558700 C1orf112Q9NSG2 853 aa9.1□□□□□ -0.95
TRAF3-205ENST00000558700 GABBR1Q9UBS5 961 aa9.1□□□□□ -0.95
TRAF3-205ENST00000558700 PCDHA4Q9UN74 947 aa9.1□□□□□ -0.95
TRAF3-205ENST00000558700 FAM50BQ9Y247 325 aa9.1□□□□□ -0.95
TRAF3-205ENST00000558700 PLXNA4Q9HCM2 1894 aa9.09□□□□□ -0.95
TRAF3-205ENST00000558700 DENND3A2RUS2 1198 aa9.09□□□□□ -0.95
TRAF3-205ENST00000558700 ADAMTS3O15072 1205 aa9.09□□□□□ -0.95
TRAF3-205ENST00000558700 GPR182O15218 404 aa9.09□□□□□ -0.95
TRAF3-205ENST00000558700 MSH4O15457 936 aa9.09□□□□□ -0.95
TRAF3-205ENST00000558700 MAGEB2O15479 319 aa9.09□□□□□ -0.95
TRAF3-205ENST00000558700 CHMP2AO43633 222 aa9.09□□□□□ -0.95
TRAF3-205ENST00000558700 NCK2O43639 380 aa9.09□□□□□ -0.95
TRAF3-205ENST00000558700 TMOD1P28289 359 aa9.09□□□□□ -0.95
TRAF3-205ENST00000558700 SARSP49591 514 aaKnown RBP9.09□□□□□ -0.95
TRAF3-205ENST00000558700 USP11P51784 963 aa9.09□□□□□ -0.95
TRAF3-205ENST00000558700 CRYBB1P53674 252 aaPredicted RBP9.09□□□□□ -0.95
TRAF3-205ENST00000558700 PRKCEQ02156 737 aa9.09□□□□□ -0.95
TRAF3-205ENST00000558700 NFX1Q12986 1120 aaKnown RBP9.09□□□□□ -0.95
TRAF3-205ENST00000558700 NAALADL2Q58DX5 795 aa9.09□□□□□ -0.95
TRAF3-205ENST00000558700 LRCH2Q5VUJ6 765 aa9.09□□□□□ -0.95
TRAF3-205ENST00000558700 GALNT17Q6IS24 598 aa9.09□□□□□ -0.95
TRAF3-205ENST00000558700 KRT25Q7Z3Z0 450 aa9.09□□□□□ -0.95
TRAF3-205ENST00000558700 KIAA0319LQ8IZA0 1049 aa9.09□□□□□ -0.95
TRAF3-205ENST00000558700 BLIDQ8IZY5 108 aa9.09□□□□□ -0.95
TRAF3-205ENST00000558700 METTL13Q8N6R0 699 aa9.09□□□□□ -0.95
TRAF3-205ENST00000558700 RDM1Q8NG50 284 aa9.09□□□□□ -0.95
TRAF3-205ENST00000558700 TBCKQ8TEA7 893 aa9.09□□□□□ -0.95
TRAF3-205ENST00000558700 SLC5A5Q92911 643 aa9.09□□□□□ -0.95
TRAF3-205ENST00000558700 P2RX5Q93086 422 aa9.09□□□□□ -0.95
TRAF3-205ENST00000558700 SCLT1Q96NL6 688 aa9.09□□□□□ -0.95
TRAF3-205ENST00000558700 UIMC1Q96RL1 719 aa9.09□□□□□ -0.95
TRAF3-205ENST00000558700 OSMRQ99650 979 aa9.09□□□□□ -0.95
TRAF3-205ENST00000558700 UPF3BQ9BZI7 483 aaKnown RBP9.09□□□□□ -0.95
TRAF3-205ENST00000558700 ERVK-5Q9HDB9 667 aa9.09□□□□□ -0.95
TRAF3-205ENST00000558700 DISC1Q9NRI5 854 aa9.09□□□□□ -0.95
TRAF3-205ENST00000558700 AKT3Q9Y243 479 aa9.09□□□□□ -0.95
TRAF3-205ENST00000558700 NOC2LQ9Y3T9 749 aaKnown RBP9.09□□□□□ -0.95
TRAF3-205ENST00000558700 MRPL42Q9Y6G3 142 aaKnown RBP9.09□□□□□ -0.95
TRAF3-205ENST00000558700 STK36Q9NRP7 1315 aa9.08□□□□□ -0.96
TRAF3-205ENST00000558700 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.08□□□□□ -0.96
TRAF3-205ENST00000558700 GRM6O15303 877 aa9.08□□□□□ -0.96
TRAF3-205ENST00000558700 VTNP04004 478 aa9.08□□□□□ -0.96
TRAF3-205ENST00000558700 ATP4AP20648 1035 aa9.08□□□□□ -0.96
TRAF3-205ENST00000558700 CLCN3P51790 818 aa9.08□□□□□ -0.96
TRAF3-205ENST00000558700 STK3Q13188 491 aa9.08□□□□□ -0.96
TRAF3-205ENST00000558700 COL19A1Q14993 1142 aa9.08□□□□□ -0.96
TRAF3-205ENST00000558700 NONOQ15233 471 aaKnown RBP eCLIP9.08□□□□□ -0.96
TRAF3-205ENST00000558700 KIZQ2M2Z5 673 aa9.08□□□□□ -0.96
TRAF3-205ENST00000558700 Q4G0T1 1027 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms